RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 IQCA1LA6NCM1 817 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 TULP2O00295 520 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 KLRC4O43908 158 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 RASA1P20936 1047 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 PRPHP41219 470 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 KRT83P78385 493 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 RASA3Q14644 834 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 ANGEL2Q5VTE6 544 aaKnown RBP13.85□□□□□ -0.19
UBA3-202ENST00000361055 USP50Q70EL3 339 aaPredicted RBP13.85□□□□□ -0.19
UBA3-202ENST00000361055 RETREG2Q8NC44 543 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 CCDC148Q8NFR7 591 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 TMEM39BQ9GZU3 492 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 MAPK8IP1Q9UQF2 711 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 PITPNM2Q9BZ72 1349 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 PSMA7O14818 248 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 EPHX2P34913 555 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 UBA7P41226 1012 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 TFAP4Q01664 338 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 GRM4Q14833 912 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 TRAPPC11Q7Z392 1133 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 TRIM34Q9BYJ4 488 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 MAGEF1Q9HAY2 307 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 PDE11AQ9HCR9 933 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 TCP11L1Q9NUJ3 509 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 GGA3Q9NZ52 723 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 MAGEC2Q9UBF1 373 aaPredicted RBP13.85□□□□□ -0.19
UBA3-202ENST00000361055 HERC5Q9UII4 1024 aaKnown RBP13.85□□□□□ -0.19
UBA3-202ENST00000361055 PCDHA6Q9UN73 950 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 PCDHA8Q9Y5H6 950 aa13.85□□□□□ -0.19
UBA3-202ENST00000361055 RHOXF2BP0C7M4 288 aa13.84□□□□□ -0.19
UBA3-202ENST00000361055 TSPY3P0CV98 308 aa13.84□□□□□ -0.19
UBA3-202ENST00000361055 TSPY8P0CW00 308 aa13.84□□□□□ -0.19
UBA3-202ENST00000361055 MCM6Q14566 821 aa13.84□□□□□ -0.19
UBA3-202ENST00000361055 MEA1Q16626 185 aa13.84□□□□□ -0.19
UBA3-202ENST00000361055 PAPD7Q5XG87 772 aaKnown RBP13.84□□□□□ -0.19
UBA3-202ENST00000361055 TTI2Q6NXR4 508 aa13.84□□□□□ -0.19
UBA3-202ENST00000361055 WDR59Q6PJI9 974 aa13.84□□□□□ -0.19
UBA3-202ENST00000361055 PNMA1Q8ND90 353 aa13.84□□□□□ -0.19
UBA3-202ENST00000361055 NEK11Q8NG66 645 aa13.84□□□□□ -0.19
UBA3-202ENST00000361055 RHOXF2Q9BQY4 288 aa13.84□□□□□ -0.19
UBA3-202ENST00000361055 IL17RBQ9NRM6 502 aa13.84□□□□□ -0.19
UBA3-202ENST00000361055 PGAP2Q9UHJ9 254 aa13.84□□□□□ -0.19
UBA3-202ENST00000361055 GUCA1BQ9UMX6 200 aa13.84□□□□□ -0.19
UBA3-202ENST00000361055 MCM3P25205 808 aa13.83□□□□□ -0.19
UBA3-202ENST00000361055 SHMT1P34896 483 aa13.83□□□□□ -0.19
UBA3-202ENST00000361055 PPP1R2P41236 205 aa13.83□□□□□ -0.19
UBA3-202ENST00000361055 VSNL1P62760 191 aa13.83□□□□□ -0.19
UBA3-202ENST00000361055 RPGRIP1Q96KN7 1286 aa13.83□□□□□ -0.19
UBA3-202ENST00000361055 AK8Q96MA6 479 aa13.83□□□□□ -0.19
UBA3-202ENST00000361055 LZTS2Q9BRK4 669 aa13.83□□□□□ -0.19
UBA3-202ENST00000361055 DEFB129Q9H1M3 183 aa13.83□□□□□ -0.19
UBA3-202ENST00000361055 DNAJC18Q9H819 358 aa13.83□□□□□ -0.19
UBA3-202ENST00000361055 TRIM49BA6NDI0 452 aa13.83□□□□□ -0.2
UBA3-202ENST00000361055 TBC1D12O60347 775 aa13.83□□□□□ -0.2
UBA3-202ENST00000361055 PMS1P54277 932 aaKnown RBP13.83□□□□□ -0.2
UBA3-202ENST00000361055 CASP8Q14790 479 aa13.83□□□□□ -0.2
UBA3-202ENST00000361055 CCDC170Q8IYT3 715 aa13.83□□□□□ -0.2
UBA3-202ENST00000361055 EHBP1Q8NDI1 1231 aa13.83□□□□□ -0.2
UBA3-202ENST00000361055 CCDC47Q96A33 483 aaKnown RBP13.83□□□□□ -0.2
UBA3-202ENST00000361055 TMEM60Q9H2L4 133 aa13.83□□□□□ -0.2
UBA3-202ENST00000361055 ACBD3Q9H3P7 528 aa13.83□□□□□ -0.2
UBA3-202ENST00000361055 MAD2L2Q9UI95 211 aa13.83□□□□□ -0.2
UBA3-202ENST00000361055 SCAF8Q9UPN6 1271 aaKnown RBP13.83□□□□□ -0.2
UBA3-202ENST00000361055 PPP2R3BQ9Y5P8 575 aa13.83□□□□□ -0.2
UBA3-202ENST00000361055 POTECB2RU33 542 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 USP14P54578 494 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 TATDN1Q6P1N9 297 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 STAG2Q8N3U4 1231 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 NOA1Q8NC60 698 aaKnown RBP13.82□□□□□ -0.2
UBA3-202ENST00000361055 GOLGA5Q8TBA6 731 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 ZC3H15Q8WU90 426 aaKnown RBP13.82□□□□□ -0.2
UBA3-202ENST00000361055 GPKOWQ92917 476 aaPredicted RBP eCLIP13.82□□□□□ -0.2
UBA3-202ENST00000361055 TRIM47Q96LD4 638 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 CCDC17Q96LX7 622 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 DUSP9Q99956 384 aaKnown RBP13.82□□□□□ -0.2
UBA3-202ENST00000361055 TAF1DQ9H5J8 278 aaPredicted RBP13.82□□□□□ -0.2
UBA3-202ENST00000361055 VIPAS39Q9H9C1 493 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 ZNHIT6Q9NWK9 470 aaKnown RBP13.82□□□□□ -0.2
UBA3-202ENST00000361055 BARHL2Q9NY43 387 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 SAR1BQ9Y6B6 198 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 GREB1LQ9C091 1923 aaPredicted RBP13.82□□□□□ -0.2
UBA3-202ENST00000361055 BICDL2A1A5D9 508 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 KRT86O43790 486 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 CCNE1P24864 410 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 CYLC1P35663 651 aaPredicted RBP13.82□□□□□ -0.2
UBA3-202ENST00000361055 HERVK_113P62684 666 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 CDK17Q00537 523 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 ZSCAN26Q16670 478 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 CCDC122Q5T0U0 273 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 TYW1BQ6NUM6 668 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 PNMA8AQ86V59 439 aaPredicted RBP13.82□□□□□ -0.2
UBA3-202ENST00000361055 FAM114A1Q8IWE2 563 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 RASSF8Q8NHQ8 419 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 NEDD1Q8NHV4 660 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 DCPSQ96C86 337 aaKnown RBP13.82□□□□□ -0.2
UBA3-202ENST00000361055 IQCDQ96DY2 449 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 TEPSINQ96N21 525 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 C7orf25Q9BPX7 421 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 TUBGCP2Q9BSJ2 902 aa13.82□□□□□ -0.2
UBA3-202ENST00000361055 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms