RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 MRPL12P52815 198 aaKnown RBP7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 HSP90AB4PQ58FF6 505 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 KCNV1Q6PIU1 500 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 SPRED2Q7Z698 418 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 MPHOSPH6Q99547 160 aaKnown RBP7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 RNF146Q9NTX7 359 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 MUC6Q6W4X9 2439 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 MYH6P13533 1939 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 STXBP3O00186 592 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 BMP3P12645 472 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 GPM6BQ13491 265 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 PTGISQ16647 500 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 GORABQ5T7V8 394 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 ANKRD35Q8N283 1001 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 NEUROD6Q96NK8 337 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 WDR11Q9BZH6 1224 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 PDGFCQ9NRA1 345 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 MUTYHQ9UIF7 546 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 ADGRA3Q8IWK6 1321 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 CYP2D6P10635 497 aa7.15□□□□□ -1.26
CDC42SE2-201ENST00000360515 STAT2P52630 851 aa7.15□□□□□ -1.26
CDC42SE2-201ENST00000360515 PLS1Q14651 629 aa7.15□□□□□ -1.26
CDC42SE2-201ENST00000360515 SUGP1Q8IWZ8 645 aaKnown RBP7.15□□□□□ -1.26
CDC42SE2-201ENST00000360515 C17orf80Q9BSJ5 609 aa7.15□□□□□ -1.26
CDC42SE2-201ENST00000360515 ANTXR1Q9H6X2 564 aa7.15□□□□□ -1.26
CDC42SE2-201ENST00000360515 TLR7Q9NYK1 1049 aaKnown RBP7.15□□□□□ -1.26
CDC42SE2-201ENST00000360515 KDM3AQ9Y4C1 1321 aa7.15□□□□□ -1.26
CDC42SE2-201ENST00000360515 DYNC1LI2O43237 492 aaPredicted RBP7.15□□□□□ -1.26
CDC42SE2-201ENST00000360515 CYP2C9P11712 490 aa7.15□□□□□ -1.26
CDC42SE2-201ENST00000360515 ANKS1AQ92625 1134 aa7.15□□□□□ -1.26
CDC42SE2-201ENST00000360515 TRERF1Q96PN7 1200 aa7.15□□□□□ -1.26
CDC42SE2-201ENST00000360515 STRBPQ96SI9 672 aaKnown RBP7.15□□□□□ -1.26
CDC42SE2-201ENST00000360515 XIRP2A4UGR9 3374 aa7.15□□□□□ -1.27
CDC42SE2-201ENST00000360515 CARNS1A5YM72 827 aa7.15□□□□□ -1.27
CDC42SE2-201ENST00000360515 IPO8O15397 1037 aaKnown RBP7.15□□□□□ -1.27
CDC42SE2-201ENST00000360515 ORC4O43929 436 aa7.15□□□□□ -1.27
CDC42SE2-201ENST00000360515 VCPP55072 806 aaKnown RBP7.15□□□□□ -1.27
CDC42SE2-201ENST00000360515 PUM1Q14671 1186 aaKnown RBP eCLIP7.15□□□□□ -1.27
CDC42SE2-201ENST00000360515 ZSCAN25Q6NSZ9 544 aa7.15□□□□□ -1.27
CDC42SE2-201ENST00000360515 GSG1L2A8MUP6 293 aa7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 RAB11FIP3O75154 756 aa7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 GLP2RO95838 553 aa7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 DUSP6Q16828 381 aa7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 ASTLQ6HA08 431 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 MAMSTRQ6ZN01 415 aa7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 OR6J1Q8NGC5 347 aa7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 PBXIP1Q96AQ6 731 aa7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 DYNLL2Q96FJ2 89 aa7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 USTQ9Y2C2 406 aa7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 WDR81Q562E7 1941 aa7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 MTCL1Q9Y4B5 1905 aaKnown RBP7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 KIF26AQ9ULI4 1882 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 PCP11498 1178 aaKnown RBP7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 ALX1Q15699 326 aa7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 CYP26C1Q6V0L0 522 aa7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 MIGA1Q8NAN2 632 aa7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 RAVER2Q9HCJ3 691 aaKnown RBP7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 RNF216Q9NWF9 866 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 ZBBXA8MT70 800 aa7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 DGKIO75912 1065 aa7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 GH1P01241 217 aa7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 TRIM27P14373 513 aa7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 HOXB8P17481 243 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 MUM1L1Q5H9M0 696 aa7.14□□□□□ -1.27
CDC42SE2-201ENST00000360515 TGFB3P10600 412 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 SSTR3P32745 418 aaPredicted RBP7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 PSEN2P49810 448 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 LAMC2Q13753 1193 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 AMOTL1Q8IY63 956 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 NECTIN4Q96NY8 510 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 C2orf16Q68DN1 1984 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 STAM2O75886 525 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 PPP2R5BQ15173 497 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 SLC9C2Q5TAH2 1124 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 FBXO16Q8IX29 292 aaPredicted RBP7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 MTMR8Q96EF0 704 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 IGSF5Q9NSI5 407 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 DDX41Q9UJV9 622 aaKnown RBP7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 PRR12Q9ULL5 1215 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 MIA3Q5JRA6 1907 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 PPFIA4O75335 1185 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 HSD17B4P51659 736 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 SHC2P98077 582 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 SKIV2LQ15477 1246 aaKnown RBP7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 TMEM63BQ5T3F8 832 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 CWF19L1Q69YN2 538 aaKnown RBP7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 CEP85Q6P2H3 762 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 SPICE1Q8N0Z3 855 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 C16orf70Q9BSU1 422 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 PLAGL2Q9UPG8 496 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 TRPC6Q9Y210 931 aa7.13□□□□□ -1.27
CDC42SE2-201ENST00000360515 MBLAC1A4D2B0 266 aaPredicted RBP7.12□□□□□ -1.27
CDC42SE2-201ENST00000360515 ZFYP08048 801 aaPredicted RBP7.12□□□□□ -1.27
CDC42SE2-201ENST00000360515 RRP1P56182 461 aaKnown RBP7.12□□□□□ -1.27
CDC42SE2-201ENST00000360515 PLCB3Q01970 1234 aa7.12□□□□□ -1.27
CDC42SE2-201ENST00000360515 HIC1Q14526 733 aa7.12□□□□□ -1.27
CDC42SE2-201ENST00000360515 DGKDQ16760 1214 aa7.12□□□□□ -1.27
CDC42SE2-201ENST00000360515 ZNF618Q5T7W0 954 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms