RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 SNRNP48Q6IEG0 339 aaKnown RBP7.57□□□□□ -1.2
CCDC196-201ENST00000359454 ZNF365Q70YC5 407 aa7.57□□□□□ -1.2
CCDC196-201ENST00000359454 SLF1Q9BQI6 1058 aa7.57□□□□□ -1.2
CCDC196-201ENST00000359454 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.57□□□□□ -1.2
CCDC196-201ENST00000359454 UPF3AQ9H1J1 476 aaKnown RBP7.57□□□□□ -1.2
CCDC196-201ENST00000359454 MTIF3Q9H2K0 278 aaKnown RBP7.57□□□□□ -1.2
CCDC196-201ENST00000359454 PLXNA1Q9UIW2 1896 aa7.57□□□□□ -1.2
CCDC196-201ENST00000359454 SMCHD1A6NHR9 2005 aa7.57□□□□□ -1.2
CCDC196-201ENST00000359454 SMIM22K7EJ46 135 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 ATP2A1O14983 1001 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 ZBED4O75132 1171 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 ACRP10323 421 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 RLBP1P12271 317 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 SMPD1P17405 629 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 NKX3-2P78367 333 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 UBE3CQ15386 1083 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 EML3Q32P44 896 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 CCDC144BQ3MJ40 725 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 GNASQ5JWF2 1037 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 PPP1R26Q5T8A7 1209 aaPredicted RBP7.56□□□□□ -1.2
CCDC196-201ENST00000359454 TRAF7Q6Q0C0 670 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 PLEKHM2Q8IWE5 1019 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 FAM126BQ8IXS8 530 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 DEPDC4Q8N2C3 294 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 PRPF38AQ8NAV1 312 aaKnown RBP7.56□□□□□ -1.2
CCDC196-201ENST00000359454 HERVK_113Q902F9 699 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 KIF1BPQ96EK5 621 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 UHRF1Q96T88 793 aaPredicted RBP7.56□□□□□ -1.2
CCDC196-201ENST00000359454 ABHD16BQ9H3Z7 469 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 IL23AQ9NPF7 189 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 PAG1Q9NWQ8 432 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 NYAP2Q9P242 653 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 FBXO40Q9UH90 709 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 RBM19Q9Y4C8 960 aaKnown RBP7.56□□□□□ -1.2
CCDC196-201ENST00000359454 RIPK3Q9Y572 518 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 CTDP1Q9Y5B0 961 aaPredicted RBP7.56□□□□□ -1.2
CCDC196-201ENST00000359454 SLC4A4Q9Y6R1 1079 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 COL11A1P12107 1806 aaPredicted RBP7.56□□□□□ -1.2
CCDC196-201ENST00000359454 MYH8P13535 1937 aa7.56□□□□□ -1.2
CCDC196-201ENST00000359454 ZBED9Q6R2W3 1325 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 F5H6K3 240 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 LZTS3O60299 673 aaPredicted RBP7.55□□□□□ -1.2
CCDC196-201ENST00000359454 RAB11FIP3O75154 756 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 CABYRO75952 493 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 NDUFB10O96000 172 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 CD4P01730 458 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 FGBP02675 491 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 ATP5JP18859 108 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 IGFBP4P22692 258 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 CYP2C18P33260 490 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 OAZ1P54368 228 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 KLRC3Q07444 240 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 NCOA4Q13772 614 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 ADGRE1Q14246 886 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 CCDC85BQ15834 202 aaPredicted RBP7.55□□□□□ -1.2
CCDC196-201ENST00000359454 ZSCAN25Q6NSZ9 544 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 CTR9Q6PD62 1173 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 CPXCR1Q8N123 301 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 ANKRD35Q8N283 1001 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 CHST13Q8NET6 341 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 NUP88Q99567 741 aaPredicted RBP7.55□□□□□ -1.2
CCDC196-201ENST00000359454 SEZ6LQ9BYH1 1024 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 NKX2-4Q9H2Z4 354 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 BOLA2Q9H3K6 86 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 SLC28A3Q9HAS3 691 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 TMPRSS4Q9NRS4 437 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 PGPEP1Q9NXJ5 209 aa7.55□□□□□ -1.2
CCDC196-201ENST00000359454 ARPP21Q9UBL0 812 aaPredicted RBP7.55□□□□□ -1.2
CCDC196-201ENST00000359454 NAP1L2Q9ULW6 460 aaPredicted RBP7.55□□□□□ -1.2
CCDC196-201ENST00000359454 CTAGE5O15320 804 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 ADCY6O43306 1168 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 HMMRO75330 724 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 RASA1P20936 1047 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 PLA2G5P39877 138 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 TNFAIP2Q03169 654 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 SBK1Q52WX2 424 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 ARMCX2Q7L311 632 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 RPAP2Q8IXW5 612 aaPredicted RBP7.54□□□□□ -1.2
CCDC196-201ENST00000359454 RPUSD2Q8IZ73 545 aaKnown RBP7.54□□□□□ -1.2
CCDC196-201ENST00000359454 SLC43A3Q8NBI5 491 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 KIFC2Q96AC6 838 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 FAM122AQ96E09 287 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 FGD4Q96M96 766 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 HAUS7Q99871 368 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 C1QTNF1Q9BXJ1 281 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 KATNBL1Q9H079 304 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 HIPK3Q9H422 1215 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 MKNK2Q9HBH9 465 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 SLC38A10Q9HBR0 1119 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 RAVER2Q9HCJ3 691 aaKnown RBP7.54□□□□□ -1.2
CCDC196-201ENST00000359454 CXXC1Q9P0U4 656 aaPredicted RBP7.54□□□□□ -1.2
CCDC196-201ENST00000359454 RAPGEFL1Q9UHV5 662 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 FEM1BQ9UK73 627 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 UNC80Q8N2C7 3258 aa7.54□□□□□ -1.2
CCDC196-201ENST00000359454 TTC28Q96AY4 2481 aa7.53□□□□□ -1.2
CCDC196-201ENST00000359454 BAZ2AQ9UIF9 1905 aaKnown RBP7.53□□□□□ -1.2
CCDC196-201ENST00000359454 FAM187AA6NFU0 413 aa7.53□□□□□ -1.2
CCDC196-201ENST00000359454 ZEB2O60315 1214 aa7.53□□□□□ -1.2
CCDC196-201ENST00000359454 BEX3Q00994 111 aa7.53□□□□□ -1.2
CCDC196-201ENST00000359454 USP4Q13107 963 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms