RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 TYW1BQ6NUM6 668 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 MCF2L2Q86YR7 1114 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 SLFN12Q8IYM2 578 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 PROCA1Q8NCQ7 364 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 RNF214Q8ND24 703 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 SMARCE1Q969G3 411 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 CALML4Q96GE6 196 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 CPVLQ9H3G5 476 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 MAP3K20Q9NYL2 800 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 PRR12Q9ULL5 1215 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 MRVI1Q9Y6F6 885 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 RANBP2P49792 3224 aaKnown RBP12.13□□□□□ -0.47
TRAPPC4-201ENST00000359005 PIK3CDO00329 1044 aa12.13□□□□□ -0.47
TRAPPC4-201ENST00000359005 ZBED4O75132 1171 aa12.13□□□□□ -0.47
TRAPPC4-201ENST00000359005 FLT3LGP49771 235 aa12.13□□□□□ -0.47
TRAPPC4-201ENST00000359005 KIF22Q14807 665 aa12.13□□□□□ -0.47
TRAPPC4-201ENST00000359005 POSTNQ15063 836 aa12.13□□□□□ -0.47
TRAPPC4-201ENST00000359005 CALCRLQ16602 461 aa12.13□□□□□ -0.47
TRAPPC4-201ENST00000359005 Q3C1V9 767 aa12.13□□□□□ -0.47
TRAPPC4-201ENST00000359005 FAM83BQ5T0W9 1011 aa12.13□□□□□ -0.47
TRAPPC4-201ENST00000359005 SYMPKQ92797 1274 aaKnown RBP12.13□□□□□ -0.47
TRAPPC4-201ENST00000359005 SHISA4Q96DD7 197 aa12.13□□□□□ -0.47
TRAPPC4-201ENST00000359005 CDK5RAP3Q96JB5 506 aa12.13□□□□□ -0.47
TRAPPC4-201ENST00000359005 PPP1R9BQ96SB3 815 aa12.13□□□□□ -0.47
TRAPPC4-201ENST00000359005 CCSER1Q9C0I3 900 aa12.13□□□□□ -0.47
TRAPPC4-201ENST00000359005 RBPJLQ9UBG7 517 aa12.13□□□□□ -0.47
TRAPPC4-201ENST00000359005 ZSWIM8A7E2V4 1837 aa12.13□□□□□ -0.47
TRAPPC4-201ENST00000359005 MYPNQ86TC9 1320 aa12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 ATAD5Q96QE3 1844 aa12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 A0A1W2PRG0 241 aa12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 FAM205CA6NFA0 338 aa12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 GNRH1P01148 92 aa12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 ELNP15502 786 aa12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 CLK2P49760 499 aaKnown RBP12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 FCGRTP55899 365 aa12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 ARHGEF6Q15052 776 aa12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 EARS2Q5JPH6 523 aaKnown RBP12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 KIAA1755Q5JYT7 1200 aa12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 RRAGBQ5VZM2 374 aa12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 KCTD17Q8N5Z5 321 aa12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 MLKLQ8NB16 471 aa12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 RASGRP4Q8TDF6 673 aa12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 SMCR8Q8TEV9 937 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 GSDMAQ96QA5 445 aa12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 SLF1Q9BQI6 1058 aa12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 RANBP17Q9H2T7 1088 aaKnown RBP12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 TMOD4Q9NZQ9 345 aa12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 TUBE1Q9UJT0 475 aa12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 GJD2Q9UKL4 321 aa12.12□□□□□ -0.47
TRAPPC4-201ENST00000359005 CEP290O15078 2479 aa12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 GCOM1H8Y6P7 765 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 TBX3O15119 743 aa12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 POLR2MP0CAP2 368 aa12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 GRK4P32298 578 aa12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 PPP1R2P41236 205 aa12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 STAT6P42226 847 aa12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 ZYXQ15942 572 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 LONRF3Q496Y0 759 aa12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 KRT79Q5XKE5 535 aa12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 SPICE1Q8N0Z3 855 aa12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 C4orf32Q8N8J7 132 aa12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 ERMNQ8TAM6 284 aa12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 RAET1EQ8TD07 263 aa12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 KIFC2Q96AC6 838 aa12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 ANO3Q9BYT9 981 aa12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 DDX25Q9UHL0 483 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 KDM3AQ9Y4C1 1321 aa12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 BAZ2BQ9UIF8 2168 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-201ENST00000359005 DOCK1Q14185 1865 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 CYP3A7-CYP3A51PA0A087WV96 503 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 IKBKBO14920 756 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 CNMDO75829 334 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 ICAM1P05362 532 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 PTMAP06454 111 aaKnown RBP12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 CYP3A7P24462 503 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 ZNF76P36508 570 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 PRMT2P55345 433 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 TRIM32Q13049 653 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 FAM110CQ1W6H9 321 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 USH1GQ495M9 461 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 NT5DC1Q5TFE4 455 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 RASGRP2Q7LDG7 609 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 DHX58Q96C10 678 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 NUP88Q99567 741 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 TANGO6Q9C0B7 1094 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 NT5C3AQ9H0P0 336 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 DNAJC25Q9H1X3 360 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 CBX8Q9HC52 389 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 DISC1Q9NRI5 854 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 LRWD1Q9UFC0 647 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 SERTAD1Q9UHV2 236 aa12.1□□□□□ -0.47
TRAPPC4-201ENST00000359005 TNPO2O14787 897 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 ADCY3O60266 1144 aa12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 PPP1R11O60927 126 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 CCL5P13501 91 aa12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 HOXD10P28358 340 aa12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 OAZ1P54368 228 aa12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 HERVK_113P62684 666 aa12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 PLCB2Q00722 1185 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms