RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 TCP11X2Q5H9J9 407 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 CDAN1Q8IWY9 1227 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 BLIDQ8IZY5 108 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 DENND2AQ9ULE3 1009 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 KDM6BO15054 1643 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 YTHDC2Q9H6S0 1430 aaKnown RBP9.5□□□□□ -0.89
COL6A6-201ENST00000358511 A0A087WWV3 80 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 PODXLO00592 558 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 ACSL3O95573 720 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 HSPD1P10809 573 aaKnown RBP9.5□□□□□ -0.89
COL6A6-201ENST00000358511 RAD23BP54727 409 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 ANAPC5Q9UJX4 755 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 OR52Z1P0C646 297 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 TIMM10P62072 90 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 YWHAEP62258 255 aaKnown RBP9.5□□□□□ -0.89
COL6A6-201ENST00000358511 TRIM11Q96F44 468 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 CACYBPQ9HB71 228 aaKnown RBP9.5□□□□□ -0.89
COL6A6-201ENST00000358511 SOS2Q07890 1332 aaPredicted RBP9.49□□□□□ -0.89
COL6A6-201ENST00000358511 GSTA1P08263 222 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 GSTA2P09210 222 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 CTDSPL2Q05D32 466 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 RBM26Q5T8P6 1007 aaKnown RBP9.49□□□□□ -0.89
COL6A6-201ENST00000358511 SMYD4Q8IYR2 804 aaPredicted RBP9.49□□□□□ -0.89
COL6A6-201ENST00000358511 ZNF532Q9HCE3 1301 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 HNRNPCL1O60812 293 aaKnown RBP9.49□□□□□ -0.89
COL6A6-201ENST00000358511 KRT10P13645 584 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 AK8Q96MA6 479 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 ZNF148Q9UQR1 794 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 PCDHB13Q9Y5F0 798 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 GRID2IPA4D2P6 1211 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 USP27XA6NNY8 438 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 FOXO3O43524 673 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 CYP4F22Q6NT55 531 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 NSUN7Q8NE18 718 aaKnown RBP9.49□□□□□ -0.89
COL6A6-201ENST00000358511 YWHAGP61981 247 aaKnown RBP eCLIP9.49□□□□□ -0.89
COL6A6-201ENST00000358511 OCA2Q04671 838 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 BFSP1Q12934 665 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 MKRN3Q13064 507 aaKnown RBP9.49□□□□□ -0.89
COL6A6-201ENST00000358511 SLC39A6Q13433 755 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 C1orf146Q5VVC0 180 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 DHX40Q8IX18 779 aaKnown RBP9.49□□□□□ -0.89
COL6A6-201ENST00000358511 PIK3R5Q8WYR1 880 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 SAMSN1Q9NSI8 373 aaKnown RBP9.49□□□□□ -0.89
COL6A6-201ENST00000358511 GCNT4Q9P109 453 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 SGK1O00141 431 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 EIF4A3P38919 411 aaKnown RBP9.49□□□□□ -0.89
COL6A6-201ENST00000358511 TRIM55Q9BYV6 548 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 UPF3AQ9H1J1 476 aaKnown RBP9.49□□□□□ -0.89
COL6A6-201ENST00000358511 IPO5O00410 1097 aaKnown RBP9.49□□□□□ -0.89
COL6A6-201ENST00000358511 NAA30Q147X3 362 aaPredicted RBP9.49□□□□□ -0.89
COL6A6-201ENST00000358511 BSPRYQ5W0U4 402 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 SYT2Q8N9I0 419 aaPredicted RBP9.49□□□□□ -0.89
COL6A6-201ENST00000358511 TGS1Q96RS0 853 aaKnown RBP9.49□□□□□ -0.89
COL6A6-201ENST00000358511 ZSCAN10Q96SZ4 725 aaPredicted RBP9.49□□□□□ -0.89
COL6A6-201ENST00000358511 C1orf112Q9NSG2 853 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 NDUFB9Q9Y6M9 179 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 PPP1R12AO14974 1030 aaPredicted RBP9.49□□□□□ -0.89
COL6A6-201ENST00000358511 SLFN14P0C7P3 912 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 GUCY1A3Q02108 690 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 KRT31Q15323 416 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 KIFC3Q9BVG8 833 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 ETNK1Q9HBU6 452 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 SLC39A2Q9NP94 309 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 BIN2Q9UBW5 565 aaPredicted RBP9.49□□□□□ -0.89
COL6A6-201ENST00000358511 MAD1L1Q9Y6D9 718 aa9.49□□□□□ -0.89
COL6A6-201ENST00000358511 FTCDO95954 541 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 HSPA8P11142 646 aaKnown RBP9.48□□□□□ -0.89
COL6A6-201ENST00000358511 IL13P35225 146 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 ADAM9Q13443 819 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 ART3Q13508 389 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 RINT1Q6NUQ1 792 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 EPM2AIP1Q7L775 607 aaPredicted RBP9.48□□□□□ -0.89
COL6A6-201ENST00000358511 TRIM15Q9C019 465 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 RESP18Q5W5W9 173 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 ZC3H15Q8WU90 426 aaKnown RBP9.48□□□□□ -0.89
COL6A6-201ENST00000358511 P2RX5Q93086 422 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 KCNF1Q9H3M0 494 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 BTBD18B2RXH4 712 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 CA4P22748 312 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 MRPS35P82673 323 aaKnown RBP9.48□□□□□ -0.89
COL6A6-201ENST00000358511 PLBD2Q8NHP8 589 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 DIS3Q9Y2L1 958 aaKnown RBP9.48□□□□□ -0.89
COL6A6-201ENST00000358511 MAGI2Q86UL8 1455 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 IRS4O14654 1257 aaPredicted RBP9.48□□□□□ -0.89
COL6A6-201ENST00000358511 ZBTB24O43167 697 aaPredicted RBP9.48□□□□□ -0.89
COL6A6-201ENST00000358511 CYP2J2P51589 502 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 NEK2P51955 445 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 PSMD2Q13200 908 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 SLFN12Q8IYM2 578 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 NFATC2IPQ8NCF5 419 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 KCNV2Q8TDN2 545 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 THOC1Q96FV9 657 aaKnown RBP9.48□□□□□ -0.89
COL6A6-201ENST00000358511 SCHIP1Q9P0W5 487 aaPredicted RBP9.48□□□□□ -0.89
COL6A6-201ENST00000358511 ZNF711Q9Y462 761 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 MYH13Q9UKX3 1938 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 CCND1P24385 295 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 RESTQ13127 1097 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 CRLF3Q8IUI8 442 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 CCDC117Q8IWD4 279 aaPredicted RBP9.48□□□□□ -0.89
COL6A6-201ENST00000358511 TTI1O43156 1089 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms