RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 CYP2C19P33261 490 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 ZBED6P86452 979 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 RC3H1Q5TC82 1133 aaKnown RBP9.18□□□□□ -0.94
CD46-205ENST00000358170 GALNT17Q6IS24 598 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 NFRKBQ6P4R8 1299 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 COG1Q8WTW3 980 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 PNMA5Q96PV4 448 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 FGFBP2Q9BYJ0 223 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 RAB34Q9BZG1 259 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 BMP2KQ9NSY1 1161 aaPredicted RBP9.18□□□□□ -0.94
CD46-205ENST00000358170 CAPN6Q9Y6Q1 641 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 ABCA3Q99758 1704 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 POTEB3A0JP26 581 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 POTECB2RU33 542 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 USO1O60763 962 aaKnown RBP9.18□□□□□ -0.94
CD46-205ENST00000358170 POLR2FP61218 127 aaKnown RBP9.18□□□□□ -0.94
CD46-205ENST00000358170 RAPGEF1Q13905 1077 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 VWA3BQ502W6 1294 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 POTEBQ6S5H4 581 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 JMJD4Q9H9V9 463 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 PACSIN2Q9UNF0 486 aaPredicted RBP9.18□□□□□ -0.94
CD46-205ENST00000358170 SFI1A8K8P3 1242 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 ZNF263O14978 683 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 GYS1P13807 737 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 SLC1A4P43007 532 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 PABPC4Q13310 644 aaKnown RBP eCLIP9.17□□□□□ -0.94
CD46-205ENST00000358170 PRR16Q569H4 304 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 MIIPQ5JXC2 388 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 TTC19Q6DKK2 380 aaPredicted RBP9.17□□□□□ -0.94
CD46-205ENST00000358170 SLF2Q8IX21 1173 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 GOLGA6L1Q8N7Z2 621 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 PROCA1Q8NCQ7 364 aaPredicted RBP9.17□□□□□ -0.94
CD46-205ENST00000358170 HDAC7Q8WUI4 952 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 AK8Q96MA6 479 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 DNAJC7Q99615 494 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 TSG101Q99816 390 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 PANK4Q9NVE7 773 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 PCDHA1Q9Y5I3 950 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 DDX60Q8IY21 1712 aaKnown RBP9.17□□□□□ -0.94
CD46-205ENST00000358170 LAD1O00515 517 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 HOXA13P31271 388 aaPredicted RBP9.17□□□□□ -0.94
CD46-205ENST00000358170 KIF11P52732 1056 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 UBXN2AP68543 259 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 MS4A14Q96JA4 679 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 TMX4Q9H1E5 349 aaPredicted RBP9.17□□□□□ -0.94
CD46-205ENST00000358170 ARHGAP20Q9P2F6 1191 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 L1RE1Q9UN81 338 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 PCDHA13Q9Y5I0 950 aa9.17□□□□□ -0.94
CD46-205ENST00000358170 COL14A1Q05707 1796 aaKnown RBP9.17□□□□□ -0.94
CD46-205ENST00000358170 A0A1W2PQC6 194 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 CHMP2AO43633 222 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 PPP1R11O60927 126 aaPredicted RBP9.16□□□□□ -0.94
CD46-205ENST00000358170 VPS72Q15906 364 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 ZSCAN26Q16670 478 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 GPBP1Q86WP2 473 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 MYOCDQ8IZQ8 938 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 CERS5Q8N5B7 392 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 ANKS1AQ92625 1134 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 C7orf25Q9BPX7 421 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 GOLPH3Q9H4A6 298 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 BCAS3Q9H6U6 928 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 ROBO1Q9Y6N7 1651 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 LRP5O75197 1615 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 POTEFA5A3E0 1075 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 POTEB2H3BUK9 544 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 TACC1O75410 805 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 TTLL1O95922 423 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 FTCDO95954 541 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 POTEIP0CG38 1075 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 MYBL2P10244 700 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 PRPHP41219 470 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 MRPL12P52815 198 aaKnown RBP9.16□□□□□ -0.94
CD46-205ENST00000358170 ZYXQ15942 572 aaKnown RBP9.16□□□□□ -0.94
CD46-205ENST00000358170 DCAF17Q5H9S7 520 aaPredicted RBP9.16□□□□□ -0.94
CD46-205ENST00000358170 FAM26FQ5R3K3 315 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 POTEGQ6S5H5 508 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 POTEEQ6S8J3 1075 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 SEPT12Q8IYM1 358 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 CUL5Q93034 780 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 NUP58Q9BVL2 599 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 LSM14BQ9BX40 385 aaKnown RBP9.16□□□□□ -0.94
CD46-205ENST00000358170 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.16□□□□□ -0.941e-8■■■■■ 43.5
CD46-205ENST00000358170 TIAM2Q8IVF5 1701 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 ZNF76P36508 570 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 AMPD2Q01433 879 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 DDR1Q08345 913 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 PLS1Q14651 629 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 LEKR1Q6ZMV7 388 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.16□□□□□ -0.94
CD46-205ENST00000358170 UNC13DQ70J99 1090 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 SND1Q7KZF4 910 aaKnown RBP eCLIP9.16□□□□□ -0.949e-12■■■■□ 20.8
CD46-205ENST00000358170 TRAPPC11Q7Z392 1133 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 DAGLBQ8NCG7 672 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 IFT81Q8WYA0 676 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 RAD54LQ92698 747 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 CALCOCO1Q9P1Z2 691 aa9.16□□□□□ -0.94
CD46-205ENST00000358170 ESYT3A0FGR9 886 aa9.15□□□□□ -0.94
CD46-205ENST00000358170 HLA-DOAP06340 250 aa9.15□□□□□ -0.94
CD46-205ENST00000358170 COASYQ13057 564 aa9.15□□□□□ -0.94
CD46-205ENST00000358170 GBP3Q9H0R5 595 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms