RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 CUEDC2Q9H467 287 aa22.72■■□□□ 1.23
COL13A1-202ENST00000357811 EIF3CLB5ME19 914 aaKnown RBP22.72■■□□□ 1.23
COL13A1-202ENST00000357811 KIF11P52732 1056 aa22.72■■□□□ 1.23
COL13A1-202ENST00000357811 SHROOM1Q2M3G4 852 aaPredicted RBP22.72■■□□□ 1.23
COL13A1-202ENST00000357811 TDRD12Q587J7 1177 aaKnown RBP22.72■■□□□ 1.23
COL13A1-202ENST00000357811 EIF3CQ99613 913 aaKnown RBP22.72■■□□□ 1.23
COL13A1-202ENST00000357811 TNRC6CQ9HCJ0 1690 aaKnown RBP22.72■■□□□ 1.23
COL13A1-202ENST00000357811 PAPD7Q5XG87 772 aaKnown RBP22.71■■□□□ 1.23
COL13A1-202ENST00000357811 MTMR9Q96QG7 549 aa22.71■■□□□ 1.23
COL13A1-202ENST00000357811 FAM204AQ9H8W3 233 aa22.71■■□□□ 1.23
COL13A1-202ENST00000357811 SALL4Q9UJQ4 1053 aa22.71■■□□□ 1.23
COL13A1-202ENST00000357811 PCDHA13Q9Y5I0 950 aa22.71■■□□□ 1.23
COL13A1-202ENST00000357811 TMEM266Q2M3C6 531 aa22.71■■□□□ 1.23
COL13A1-202ENST00000357811 KRT79Q5XKE5 535 aa22.71■■□□□ 1.23
COL13A1-202ENST00000357811 CENPPQ6IPU0 288 aa22.71■■□□□ 1.23
COL13A1-202ENST00000357811 GBP3Q9H0R5 595 aa22.71■■□□□ 1.23
COL13A1-202ENST00000357811 DDX4Q9NQI0 724 aaKnown RBP22.71■■□□□ 1.23
COL13A1-202ENST00000357811 ANKRD65E5RJM6 399 aa22.71■■□□□ 1.23
COL13A1-202ENST00000357811 PPP1R11O60927 126 aaPredicted RBP22.71■■□□□ 1.23
COL13A1-202ENST00000357811 VAV2P52735 878 aa22.71■■□□□ 1.23
COL13A1-202ENST00000357811 CACNA2D4Q7Z3S7 1137 aa22.71■■□□□ 1.23
COL13A1-202ENST00000357811 EXOC4Q96A65 974 aa22.71■■□□□ 1.23
COL13A1-202ENST00000357811 MTMR4Q9NYA4 1195 aa22.71■■□□□ 1.23
COL13A1-202ENST00000357811 LCMT1Q9UIC8 334 aa22.71■■□□□ 1.23
COL13A1-202ENST00000357811 DAGLAQ9Y4D2 1042 aa22.71■■□□□ 1.23
COL13A1-202ENST00000357811 RASSF7Q02833 373 aa22.7■■□□□ 1.22
COL13A1-202ENST00000357811 TRAF5O00463 557 aa22.7■■□□□ 1.22
COL13A1-202ENST00000357811 RNASE9P60153 205 aaKnown RBP22.7■■□□□ 1.22
COL13A1-202ENST00000357811 SNAP25P60880 206 aa22.7■■□□□ 1.22
COL13A1-202ENST00000357811 ERGIC2Q96RQ1 377 aa22.7■■□□□ 1.22
COL13A1-202ENST00000357811 RABEP2Q9H5N1 569 aa22.7■■□□□ 1.22
COL13A1-202ENST00000357811 LRRC4BQ9NT99 713 aa22.7■■□□□ 1.22
COL13A1-202ENST00000357811 USP17L15C9J2P7 530 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 USP17L13C9JLJ4 530 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 USP17L11C9JVI0 530 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 USP17L18D6R9N7 530 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 USP17L22D6RA61 530 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 USP17L17D6RBQ6 530 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 USP17L19D6RCP7 530 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 USP17L20D6RJB6 530 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 USP17L24Q0WX57 530 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 PTPROQ16827 1216 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 USP17L6PQ6QN14 398 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 UNC13DQ70J99 1090 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 ADGRF4Q8IZF3 695 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 SIK3Q9Y2K2 1263 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 USP17L10C9JJH3 530 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 E9PMD0 336 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 RNF40O75150 1001 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 CACNB3P54284 484 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 ZSCAN29Q8IWY8 852 aaPredicted RBP22.69■■□□□ 1.22
COL13A1-202ENST00000357811 CCDC170Q8IYT3 715 aa22.69■■□□□ 1.22
COL13A1-202ENST00000357811 TAL1P17542 331 aaPredicted RBP22.68■■□□□ 1.22
COL13A1-202ENST00000357811 DOK7Q18PE1 504 aa22.68■■□□□ 1.22
COL13A1-202ENST00000357811 DNAAF5Q86Y56 855 aa22.68■■□□□ 1.22
COL13A1-202ENST00000357811 RETREG2Q8NC44 543 aa22.68■■□□□ 1.22
COL13A1-202ENST00000357811 EHBP1Q8NDI1 1231 aa22.68■■□□□ 1.22
COL13A1-202ENST00000357811 RAD54LQ92698 747 aa22.68■■□□□ 1.22
COL13A1-202ENST00000357811 PLAGL2Q9UPG8 496 aa22.68■■□□□ 1.22
COL13A1-202ENST00000357811 WDR93Q6P2C0 686 aa22.68■■□□□ 1.22
COL13A1-202ENST00000357811 TBC1D16Q8TBP0 767 aa22.68■■□□□ 1.22
COL13A1-202ENST00000357811 LRRC1Q9BTT6 524 aa22.68■■□□□ 1.22
COL13A1-202ENST00000357811 RIOX1Q9H6W3 641 aa22.68■■□□□ 1.22
COL13A1-202ENST00000357811 JMJD4Q9H9V9 463 aa22.68■■□□□ 1.22
COL13A1-202ENST00000357811 MAGEF1Q9HAY2 307 aa22.68■■□□□ 1.22
COL13A1-202ENST00000357811 DDX25Q9UHL0 483 aaKnown RBP22.68■■□□□ 1.22
COL13A1-202ENST00000357811 DMGDHQ9UI17 866 aaKnown RBP22.68■■□□□ 1.22
COL13A1-202ENST00000357811 NRAPQ86VF7 1730 aa22.68■■□□□ 1.22
COL13A1-202ENST00000357811 CCDC40Q4G0X9 1142 aa22.68■■□□□ 1.22
COL13A1-202ENST00000357811 MS4A14Q96JA4 679 aa22.68■■□□□ 1.22
COL13A1-202ENST00000357811 STAT3P40763 770 aa22.67■■□□□ 1.22
COL13A1-202ENST00000357811 SLC1A4P43007 532 aa22.67■■□□□ 1.22
COL13A1-202ENST00000357811 MAGEA1P43355 309 aa22.67■■□□□ 1.22
COL13A1-202ENST00000357811 USO1O60763 962 aaKnown RBP22.67■■□□□ 1.22
COL13A1-202ENST00000357811 SERPINB2P05120 415 aa22.67■■□□□ 1.22
COL13A1-202ENST00000357811 MAN2A1Q16706 1144 aa22.67■■□□□ 1.22
COL13A1-202ENST00000357811 GGCXP38435 758 aa22.66■■□□□ 1.22
COL13A1-202ENST00000357811 LEKR1Q6ZMV7 388 aa22.66■■□□□ 1.22
COL13A1-202ENST00000357811 KIAA1024Q9UPX6 916 aa22.66■■□□□ 1.22
COL13A1-202ENST00000357811 TRIM66O15016 1216 aa22.66■■□□□ 1.22
COL13A1-202ENST00000357811 TACC1O75410 805 aa22.66■■□□□ 1.22
COL13A1-202ENST00000357811 CKAP4Q07065 602 aaKnown RBP22.66■■□□□ 1.22
COL13A1-202ENST00000357811 TCP10Q12799 353 aa22.66■■□□□ 1.22
COL13A1-202ENST00000357811 CREG2Q8IUH2 290 aa22.66■■□□□ 1.22
COL13A1-202ENST00000357811 HAS1Q92839 578 aa22.66■■□□□ 1.22
COL13A1-202ENST00000357811 SELENOOQ9BVL4 669 aa22.66■■□□□ 1.22
COL13A1-202ENST00000357811 HPCAL4Q9UM19 191 aa22.66■■□□□ 1.22
COL13A1-202ENST00000357811 SYF2O95926 243 aaKnown RBP22.65■■□□□ 1.22
COL13A1-202ENST00000357811 LRRC55Q6ZSA7 311 aa22.65■■□□□ 1.22
COL13A1-202ENST00000357811 SH2D4AQ9H788 454 aa22.65■■□□□ 1.22
COL13A1-202ENST00000357811 SNX12Q9UMY4 172 aa22.65■■□□□ 1.22
COL13A1-202ENST00000357811 PACSIN2Q9UNF0 486 aaPredicted RBP22.65■■□□□ 1.22
COL13A1-202ENST00000357811 MYH1P12882 1939 aa22.65■■□□□ 1.22
COL13A1-202ENST00000357811 PLCG2P16885 1265 aa22.65■■□□□ 1.22
COL13A1-202ENST00000357811 ACTN2P35609 894 aa22.65■■□□□ 1.22
COL13A1-202ENST00000357811 COASYQ13057 564 aa22.65■■□□□ 1.22
COL13A1-202ENST00000357811 PCDHA12Q9UN75 941 aa22.65■■□□□ 1.22
COL13A1-202ENST00000357811 POTEB3A0JP26 581 aa22.65■■□□□ 1.22
COL13A1-202ENST00000357811 POTECB2RU33 542 aa22.65■■□□□ 1.22
COL13A1-202ENST00000357811 POLR2FP61218 127 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms