RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 CCDC42Q96M95 316 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 TUBGCP2Q9BSJ2 902 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 EHD4Q9H223 541 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 KLC4Q9NSK0 619 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 FAM205CA6NFA0 338 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 NR1D1P20393 614 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 CCNE1P24864 410 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 PUM3Q15397 648 aaKnown RBP11.79□□□□□ -0.52
CAPN3-205ENST00000357568 CCDC40Q4G0X9 1142 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 EARS2Q5JPH6 523 aaKnown RBP11.79□□□□□ -0.52
CAPN3-205ENST00000357568 FOXR2Q6PJQ5 311 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 LDHAL6AQ6ZMR3 332 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 C3orf67Q6ZVT6 689 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 CCDC24Q8N4L8 307 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 CCDC47Q96A33 483 aaKnown RBP11.79□□□□□ -0.52
CAPN3-205ENST00000357568 ATP6V1G3Q96LB4 118 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 TRIM47Q96LD4 638 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 GDAP1L1Q96MZ0 367 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 DISC1Q9NRI5 854 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 GDAQ9Y2T3 454 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 PCDHA13Q9Y5I0 950 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 MROH5Q6ZUA9 1318 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 LRRC37AA6NMS7 1700 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 CES2O00748 559 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 KLRC4O43908 158 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 STAT6P42226 847 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 NT5C2P49902 561 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 ZNF174Q15697 407 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 CFAP221Q4G0U5 840 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 GRIPAP1Q4V328 841 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 FKBP15Q5T1M5 1219 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-205ENST00000357568 CATIPQ7Z7H3 387 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 NLRP14Q86W24 1093 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 MYCBPAPQ8TBZ2 947 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 IFIH1Q9BYX4 1025 aaKnown RBP11.79□□□□□ -0.52
CAPN3-205ENST00000357568 CCSER1Q9C0I3 900 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 SUFUQ9UMX1 484 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 SAMM50Q9Y512 469 aa11.79□□□□□ -0.52
CAPN3-205ENST00000357568 DUOX1Q9NRD9 1551 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 HOXD11P31277 338 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-205ENST00000357568 ELF1P32519 619 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 HSPA9P38646 679 aaKnown RBP11.78□□□□□ -0.52
CAPN3-205ENST00000357568 TDO2P48775 406 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 TBC1D8BQ0IIM8 1120 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 TMTC3Q6ZXV5 915 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 SPATA5Q8NB90 893 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 RNPC3Q96LT9 517 aaKnown RBP11.78□□□□□ -0.52
CAPN3-205ENST00000357568 KBTBD4Q9NVX7 518 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 TNKSO95271 1327 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 ARFGEF1Q9Y6D6 1849 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 SSU72P8A0A1W2PR75 194 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 LAD1O00515 517 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 BBOX1O75936 387 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 FGRP09769 529 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 DPEP1P16444 411 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 ERCC3P19447 782 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 CALML3P27482 149 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 GRAPQ13588 217 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 CCDC96Q2M329 555 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 LACTB2Q53H82 288 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-205ENST00000357568 C4orf32Q8N8J7 132 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 GRAPLQ8TC17 118 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-205ENST00000357568 HDAC7Q8WUI4 952 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 NUP133Q8WUM0 1156 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 CCT8L2Q96SF2 557 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 DUSP9Q99956 384 aaKnown RBP11.78□□□□□ -0.52
CAPN3-205ENST00000357568 FHDC1Q9C0D6 1143 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-205ENST00000357568 SH3GLB2Q9NR46 395 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 AGPAT5Q9NUQ2 364 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 LRWD1Q9UFC0 647 aa11.78□□□□□ -0.52
CAPN3-205ENST00000357568 MACROD2A1Z1Q3 448 aa11.77□□□□□ -0.52
CAPN3-205ENST00000357568 C5orf60A6NFR6 353 aa11.77□□□□□ -0.52
CAPN3-205ENST00000357568 ZNF233A6NK53 670 aa11.77□□□□□ -0.52
CAPN3-205ENST00000357568 B4DLN1 442 aa11.77□□□□□ -0.52
CAPN3-205ENST00000357568 RBAK-RBAKDNI3L0D1 243 aa11.77□□□□□ -0.52
CAPN3-205ENST00000357568 MYO1FO00160 1098 aa11.77□□□□□ -0.52
CAPN3-205ENST00000357568 ZNF263O14978 683 aa11.77□□□□□ -0.52
CAPN3-205ENST00000357568 PAEPP09466 180 aa11.77□□□□□ -0.52
CAPN3-205ENST00000357568 KCNA3P22001 575 aa11.77□□□□□ -0.52
CAPN3-205ENST00000357568 CDR1P51861 262 aa11.77□□□□□ -0.52
CAPN3-205ENST00000357568 PPARAQ07869 468 aa11.77□□□□□ -0.52
CAPN3-205ENST00000357568 P2RX5Q93086 422 aa11.77□□□□□ -0.52
CAPN3-205ENST00000357568 PLCB1Q9NQ66 1216 aa11.77□□□□□ -0.52
CAPN3-205ENST00000357568 CAPN6Q9Y6Q1 641 aa11.77□□□□□ -0.52
CAPN3-205ENST00000357568 CNTNAP5Q8WYK1 1306 aa11.77□□□□□ -0.53
CAPN3-205ENST00000357568 GHRP10912 638 aa11.77□□□□□ -0.53
CAPN3-205ENST00000357568 ITGA6P23229 1130 aa11.77□□□□□ -0.53
CAPN3-205ENST00000357568 PHKA1P46020 1223 aa11.77□□□□□ -0.53
CAPN3-205ENST00000357568 ITGB3BPQ13352 177 aaPredicted RBP11.77□□□□□ -0.53
CAPN3-205ENST00000357568 BIRC3Q13489 604 aa11.77□□□□□ -0.53
CAPN3-205ENST00000357568 IL17AQ16552 155 aa11.77□□□□□ -0.53
CAPN3-205ENST00000357568 CCDC13Q8IYE1 715 aa11.77□□□□□ -0.53
CAPN3-205ENST00000357568 CSGALNACT2Q8N6G5 542 aa11.77□□□□□ -0.53
CAPN3-205ENST00000357568 MAGEB6Q8N7X4 407 aa11.77□□□□□ -0.53
CAPN3-205ENST00000357568 JPH2Q9BR39 696 aaPredicted RBP11.77□□□□□ -0.53
CAPN3-205ENST00000357568 SYT17Q9BSW7 474 aa11.77□□□□□ -0.53
CAPN3-205ENST00000357568 NUCKS1Q9H1E3 243 aaKnown RBP11.77□□□□□ -0.53
CAPN3-205ENST00000357568 GREM2Q9H772 168 aa11.77□□□□□ -0.53
CAPN3-205ENST00000357568 ARMT1Q9H993 441 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms