RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 CWC15Q9P013 229 aaKnown RBP14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 SEC63Q9UGP8 760 aaKnown RBP14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 L1RE1Q9UN81 338 aa14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 SRPRBQ9Y5M8 271 aaKnown RBP14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 TAL1P17542 331 aaPredicted RBP14.2□□□□□ -0.14
RTFDC1-202ENST00000357348 NF2P35240 595 aa14.2□□□□□ -0.14
RTFDC1-202ENST00000357348 MTF1Q14872 753 aa14.2□□□□□ -0.14
RTFDC1-202ENST00000357348 KARSQ15046 597 aaKnown RBP14.2□□□□□ -0.14
RTFDC1-202ENST00000357348 SAFBQ15424 915 aaKnown RBP eCLIP14.2□□□□□ -0.14
RTFDC1-202ENST00000357348 RILPL1Q5EBL4 403 aa14.2□□□□□ -0.14
RTFDC1-202ENST00000357348 GPATCH4Q5T3I0 446 aaKnown RBP14.2□□□□□ -0.14
RTFDC1-202ENST00000357348 WWC2Q6AWC2 1192 aa14.2□□□□□ -0.14
RTFDC1-202ENST00000357348 DIS3L2Q8IYB7 885 aaKnown RBP14.2□□□□□ -0.14
RTFDC1-202ENST00000357348 DCAF4Q8WV16 495 aa14.2□□□□□ -0.14
RTFDC1-202ENST00000357348 COA7Q96BR5 231 aa14.2□□□□□ -0.14
RTFDC1-202ENST00000357348 SPZ1Q9BXG8 430 aa14.2□□□□□ -0.14
RTFDC1-202ENST00000357348 VCPKMTQ9H867 229 aa14.2□□□□□ -0.14
RTFDC1-202ENST00000357348 FBXO28Q9NVF7 368 aa14.2□□□□□ -0.14
RTFDC1-202ENST00000357348 ACTN2P35609 894 aa14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 CDKAL1Q5VV42 579 aa14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 HDXQ7Z353 690 aa14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 CCDC51Q96ER9 411 aa14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 LZTS2Q9BRK4 669 aa14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 RIOX1Q9H6W3 641 aa14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 ELP3Q9H9T3 547 aa14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 SOWAHDA6NJG2 315 aa14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 POLR2DO15514 142 aaKnown RBP14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 TUBBP07437 444 aa14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 NLRP5P59047 1200 aa14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 GRIN1Q05586 938 aa14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 SPATA1Q5VX52 437 aa14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 SH3RF1Q7Z6J0 888 aa14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 TRMT44Q8IYL2 757 aaKnown RBP14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 GMCL1Q96IK5 515 aa14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 IRX2Q9BZI1 471 aaPredicted RBP14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 SH2D4AQ9H788 454 aa14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 ADD3Q9UEY8 706 aaKnown RBP14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 ITIH6Q6UXX5 1313 aa14.19□□□□□ -0.14
RTFDC1-202ENST00000357348 PHIPQ8WWQ0 1821 aa14.18□□□□□ -0.14
RTFDC1-202ENST00000357348 KIF5CO60282 957 aa14.18□□□□□ -0.14
RTFDC1-202ENST00000357348 XBP1P17861 261 aa14.18□□□□□ -0.14
RTFDC1-202ENST00000357348 HMGCS2P54868 508 aa14.18□□□□□ -0.14
RTFDC1-202ENST00000357348 CUL4BQ13620 913 aa14.18□□□□□ -0.14
RTFDC1-202ENST00000357348 NOM1Q5C9Z4 860 aaKnown RBP14.18□□□□□ -0.14
RTFDC1-202ENST00000357348 CSADQ9Y600 493 aa14.18□□□□□ -0.14
RTFDC1-202ENST00000357348 SNCAIPQ9Y6H5 919 aa14.18□□□□□ -0.14
RTFDC1-202ENST00000357348 TEX33O43247 280 aa14.18□□□□□ -0.14
RTFDC1-202ENST00000357348 MFAP3LO75121 409 aa14.18□□□□□ -0.14
RTFDC1-202ENST00000357348 ATP2B1P20020 1258 aa14.18□□□□□ -0.14
RTFDC1-202ENST00000357348 IREB2P48200 963 aaKnown RBP14.18□□□□□ -0.14
RTFDC1-202ENST00000357348 RBL2Q08999 1139 aa14.18□□□□□ -0.14
RTFDC1-202ENST00000357348 SPECC1Q5M775 1068 aa14.18□□□□□ -0.14
RTFDC1-202ENST00000357348 ZNF280CQ8ND82 737 aa14.18□□□□□ -0.14
RTFDC1-202ENST00000357348 RASGRP4Q8TDF6 673 aa14.18□□□□□ -0.14
RTFDC1-202ENST00000357348 PNKPQ96T60 521 aa14.18□□□□□ -0.14
RTFDC1-202ENST00000357348 PHF20Q9BVI0 1012 aa14.18□□□□□ -0.14
RTFDC1-202ENST00000357348 FAM205CA6NFA0 338 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 PPP1R11O60927 126 aaPredicted RBP14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 ERLIN1O75477 346 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 STAT2P52630 851 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 NAPAP54920 295 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 CDC37Q16543 378 aaPredicted RBP14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 USH1GQ495M9 461 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 HSP90AA4PQ58FG1 418 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 SRLQ86TD4 932 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 OTUD5Q96G74 571 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 TANGO6Q9C0B7 1094 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 EMILIN3Q9NT22 766 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 MYO1AQ9UBC5 1043 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 MYO1CO00159 1063 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 STXBP3O00186 592 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 WHAMMP3Q1A5X7 153 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 SYDE2Q5VT97 1194 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 IGSF22Q8N9C0 903 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 CTAGE1Q96RT6 745 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 AS3MTQ9HBK9 375 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 BARHL2Q9NY43 387 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 PRR12Q9ULL5 1215 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 CEP131Q9UPN4 1083 aa14.17□□□□□ -0.14
RTFDC1-202ENST00000357348 EIF3JO75822 258 aaKnown RBP14.16□□□□□ -0.14
RTFDC1-202ENST00000357348 IVLP07476 585 aa14.16□□□□□ -0.14
RTFDC1-202ENST00000357348 LMAN1P49257 510 aa14.16□□□□□ -0.14
RTFDC1-202ENST00000357348 GYS2P54840 703 aa14.16□□□□□ -0.14
RTFDC1-202ENST00000357348 BACE1P56817 501 aa14.16□□□□□ -0.14
RTFDC1-202ENST00000357348 QRICH1Q2TAL8 776 aa14.16□□□□□ -0.14
RTFDC1-202ENST00000357348 EARS2Q5JPH6 523 aaKnown RBP14.16□□□□□ -0.14
RTFDC1-202ENST00000357348 CCDC174Q6PII3 467 aa14.16□□□□□ -0.14
RTFDC1-202ENST00000357348 PPFIBP1Q86W92 1011 aa14.16□□□□□ -0.14
RTFDC1-202ENST00000357348 KIAA1683Q9H0B3 1180 aa14.16□□□□□ -0.14
RTFDC1-202ENST00000357348 RASSF4Q9H2L5 321 aa14.16□□□□□ -0.14
RTFDC1-202ENST00000357348 PDE11AQ9HCR9 933 aa14.16□□□□□ -0.14
RTFDC1-202ENST00000357348 ZBTB5O15062 677 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 VCAM1P19320 739 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 KRT2P35908 639 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 MKRN3Q13064 507 aaKnown RBP14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 NPY5RQ15761 445 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 LDHDQ86WU2 507 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 CNGA4Q8IV77 575 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 TRERF1Q96PN7 1200 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 GBP3Q9H0R5 595 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms