RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 CTAGE1Q96RT6 745 aa19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 IWS1Q96ST2 819 aa19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 MAP3K14Q99558 947 aa19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 BRPF3Q9ULD4 1205 aa19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 TELO2Q9Y4R8 837 aa19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 ZEB2O60315 1214 aa19.38■□□□□ 0.69
PDLIM7-201ENST00000355572 LIFRP42702 1097 aa19.38■□□□□ 0.69
PDLIM7-201ENST00000355572 CPT1AP50416 773 aa19.38■□□□□ 0.69
PDLIM7-201ENST00000355572 CCL23P55773 120 aa19.38■□□□□ 0.69
PDLIM7-201ENST00000355572 USP17L6PQ6QN14 398 aa19.38■□□□□ 0.69
PDLIM7-201ENST00000355572 FCHSD1Q86WN1 690 aa19.38■□□□□ 0.69
PDLIM7-201ENST00000355572 RNPC3Q96LT9 517 aaKnown RBP19.38■□□□□ 0.69
PDLIM7-201ENST00000355572 MTG1Q9BT17 334 aaPredicted RBP19.38■□□□□ 0.69
PDLIM7-201ENST00000355572 MTA3Q9BTC8 594 aa19.38■□□□□ 0.69
PDLIM7-201ENST00000355572 TTYH1Q9H313 450 aaPredicted RBP19.38■□□□□ 0.69
PDLIM7-201ENST00000355572 POLR3EQ9NVU0 708 aa19.38■□□□□ 0.69
PDLIM7-201ENST00000355572 FRMPD4Q14CM0 1322 aa19.37■□□□□ 0.69
PDLIM7-201ENST00000355572 GRXCR1A8MXD5 290 aa19.37■□□□□ 0.69
PDLIM7-201ENST00000355572 TLR3O15455 904 aaKnown RBP19.37■□□□□ 0.69
PDLIM7-201ENST00000355572 MRPS9P82933 396 aaKnown RBP19.37■□□□□ 0.69
PDLIM7-201ENST00000355572 SEMA3FQ13275 785 aa19.37■□□□□ 0.69
PDLIM7-201ENST00000355572 NFXL1Q6ZNB6 911 aa19.37■□□□□ 0.69
PDLIM7-201ENST00000355572 VSIG10LQ86VR7 867 aa19.37■□□□□ 0.69
PDLIM7-201ENST00000355572 CCDC82Q8N4S0 544 aa19.37■□□□□ 0.69
PDLIM7-201ENST00000355572 CTCFLQ8NI51 663 aaPredicted RBP19.37■□□□□ 0.69
PDLIM7-201ENST00000355572 SCLYQ96I15 445 aa19.37■□□□□ 0.69
PDLIM7-201ENST00000355572 HIPK3Q9H422 1215 aa19.37■□□□□ 0.69
PDLIM7-201ENST00000355572 COL6A3P12111 3177 aa19.36■□□□□ 0.69
PDLIM7-201ENST00000355572 CCDC69A6NI79 296 aa19.36■□□□□ 0.69
PDLIM7-201ENST00000355572 GCOM1H8Y6P7 765 aaPredicted RBP19.36■□□□□ 0.69
PDLIM7-201ENST00000355572 MEIS2O14770 477 aa19.36■□□□□ 0.69
PDLIM7-201ENST00000355572 EIF3JO75822 258 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-201ENST00000355572 GH1P01241 217 aa19.36■□□□□ 0.69
PDLIM7-201ENST00000355572 POLR2MP0CAP2 368 aa19.36■□□□□ 0.69
PDLIM7-201ENST00000355572 RASIP1Q5U651 963 aa19.36■□□□□ 0.69
PDLIM7-201ENST00000355572 ZNF365Q70YC5 407 aa19.36■□□□□ 0.69
PDLIM7-201ENST00000355572 SGMS1Q86VZ5 419 aa19.36■□□□□ 0.69
PDLIM7-201ENST00000355572 MICU3Q86XE3 530 aa19.36■□□□□ 0.69
PDLIM7-201ENST00000355572 NEK1Q96PY6 1258 aa19.36■□□□□ 0.69
PDLIM7-201ENST00000355572 MPHOSPH6Q99547 160 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-201ENST00000355572 CNTNAP5Q8WYK1 1306 aa19.35■□□□□ 0.69
PDLIM7-201ENST00000355572 FUT2Q10981 343 aa19.35■□□□□ 0.69
PDLIM7-201ENST00000355572 HIC1Q14526 733 aa19.35■□□□□ 0.69
PDLIM7-201ENST00000355572 TSGA10IPQ3SY00 556 aa19.35■□□□□ 0.69
PDLIM7-201ENST00000355572 TYW1BQ6NUM6 668 aa19.35■□□□□ 0.69
PDLIM7-201ENST00000355572 APOA5Q6Q788 366 aa19.35■□□□□ 0.69
PDLIM7-201ENST00000355572 TMTC3Q6ZXV5 915 aa19.35■□□□□ 0.69
PDLIM7-201ENST00000355572 FAM217BQ9NTX9 383 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-201ENST00000355572 CXXC1Q9P0U4 656 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-201ENST00000355572 MRVI1Q9Y6F6 885 aa19.35■□□□□ 0.69
PDLIM7-201ENST00000355572 B4DLN1 442 aa19.34■□□□□ 0.69
PDLIM7-201ENST00000355572 ZNF286BP0CG31 522 aa19.34■□□□□ 0.69
PDLIM7-201ENST00000355572 UBA1P22314 1058 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-201ENST00000355572 MRPL12P52815 198 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-201ENST00000355572 CHMP4BP1P59074 171 aa19.34■□□□□ 0.69
PDLIM7-201ENST00000355572 PPIGQ13427 754 aaKnown RBP eCLIP19.34■□□□□ 0.698e-7■■■□□ 17.4
PDLIM7-201ENST00000355572 HSDL1Q3SXM5 330 aa19.34■□□□□ 0.69
PDLIM7-201ENST00000355572 FAM47CQ5HY64 1035 aa19.34■□□□□ 0.69
PDLIM7-201ENST00000355572 KCNB2Q92953 911 aa19.34■□□□□ 0.69
PDLIM7-201ENST00000355572 RRP36Q96EU6 259 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-201ENST00000355572 MAP3K20Q9NYL2 800 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-201ENST00000355572 SMARCA1P28370 1054 aa19.33■□□□□ 0.68
PDLIM7-201ENST00000355572 KIF5BP33176 963 aa19.33■□□□□ 0.68
PDLIM7-201ENST00000355572 PBX2P40425 430 aa19.33■□□□□ 0.68
PDLIM7-201ENST00000355572 SMAD3P84022 425 aaKnown RBP19.33■□□□□ 0.68
PDLIM7-201ENST00000355572 UBE2SQ16763 222 aa19.33■□□□□ 0.68
PDLIM7-201ENST00000355572 MYSM1Q5VVJ2 828 aa19.33■□□□□ 0.68
PDLIM7-201ENST00000355572 GDF6Q6KF10 455 aaPredicted RBP19.33■□□□□ 0.68
PDLIM7-201ENST00000355572 FANCBQ8NB91 859 aa19.33■□□□□ 0.68
PDLIM7-201ENST00000355572 IL23AQ9NPF7 189 aa19.33■□□□□ 0.68
PDLIM7-201ENST00000355572 RTEL1Q9NZ71 1219 aa19.33■□□□□ 0.68
PDLIM7-201ENST00000355572 SLC12A7Q9Y666 1083 aa19.33■□□□□ 0.68
PDLIM7-201ENST00000355572 GGPS1O95749 300 aa19.32■□□□□ 0.68
PDLIM7-201ENST00000355572 CDC27P30260 824 aa19.32■□□□□ 0.68
PDLIM7-201ENST00000355572 DHX32Q7L7V1 743 aaKnown RBP19.32■□□□□ 0.68
PDLIM7-201ENST00000355572 TMTC2Q8N394 836 aa19.32■□□□□ 0.68
PDLIM7-201ENST00000355572 TMEM199Q8N511 208 aa19.32■□□□□ 0.68
PDLIM7-201ENST00000355572 SAMD3Q8N6K7 520 aa19.32■□□□□ 0.68
PDLIM7-201ENST00000355572 DHX38Q92620 1227 aaKnown RBP19.32■□□□□ 0.68
PDLIM7-201ENST00000355572 WNT8BQ93098 351 aa19.32■□□□□ 0.68
PDLIM7-201ENST00000355572 EMID1Q96A84 441 aaPredicted RBP19.32■□□□□ 0.68
PDLIM7-201ENST00000355572 SNX14Q9Y5W7 946 aa19.32■□□□□ 0.68
PDLIM7-201ENST00000355572 CDH23Q9H251 3354 aa19.32■□□□□ 0.68
PDLIM7-201ENST00000355572 SIP14410 1827 aa19.31■□□□□ 0.68
PDLIM7-201ENST00000355572 HAS3O00219 553 aa19.31■□□□□ 0.68
PDLIM7-201ENST00000355572 ADAMTS3O15072 1205 aa19.31■□□□□ 0.68
PDLIM7-201ENST00000355572 HOXD8P13378 290 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-201ENST00000355572 CCND2P30279 289 aa19.31■□□□□ 0.68
PDLIM7-201ENST00000355572 ZNF200P98182 395 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-201ENST00000355572 GPNMBQ14956 572 aa19.31■□□□□ 0.68
PDLIM7-201ENST00000355572 CELF3Q5SZQ8 465 aaKnown RBP19.31■□□□□ 0.68
PDLIM7-201ENST00000355572 NFRKBQ6P4R8 1299 aa19.31■□□□□ 0.68
PDLIM7-201ENST00000355572 SEMA6BQ9H3T3 888 aa19.31■□□□□ 0.68
PDLIM7-201ENST00000355572 HSPA4P34932 840 aa19.3■□□□□ 0.68
PDLIM7-201ENST00000355572 RNF20Q5VTR2 975 aa19.3■□□□□ 0.68
PDLIM7-201ENST00000355572 WWC2Q6AWC2 1192 aa19.3■□□□□ 0.68
PDLIM7-201ENST00000355572 OTOP2Q7RTS6 562 aa19.3■□□□□ 0.68
PDLIM7-201ENST00000355572 DHX37Q8IY37 1157 aaKnown RBP19.3■□□□□ 0.68
PDLIM7-201ENST00000355572 PPTC7Q8NI37 304 aa19.3■□□□□ 0.68
PDLIM7-201ENST00000355572 INPP4AQ96PE3 977 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms