RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 PALM3A6NDB9 673 aaPredicted RBP13.54□□□□□ -0.24
COLCA1-201ENST00000355430 TADA3O75528 432 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 MOCS3O95396 460 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 ASNSP08243 561 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 FAM160B1Q5W0V3 765 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 EP400NLQ6ZTU2 488 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 NYAP1Q6ZVC0 841 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 DHTKD1Q96HY7 919 aaPredicted RBP13.54□□□□□ -0.24
COLCA1-201ENST00000355430 ADAM21Q9UKJ8 722 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 CAPN7Q9Y6W3 813 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 TMEM131LA2VDJ0 1609 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 SNAP23O00161 211 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 CXCR5P32302 372 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 MB21D1Q8N884 522 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 ABHD10Q9NUJ1 306 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 GAS7O60861 476 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 MIGA2Q7L4E1 593 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 DPH6Q7L8W6 267 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 GSTA5Q7RTV2 222 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 MIER3Q7Z3K6 550 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 ENGASEQ8NFI3 743 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 NAP1L3Q99457 506 aaPredicted RBP13.53□□□□□ -0.24
COLCA1-201ENST00000355430 PSTPIP2Q9H939 334 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 CEMIPQ8WUJ3 1361 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 TMOD1P28289 359 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 GUCY1A2P33402 732 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 CYP27A1Q02318 531 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 GUCY2DQ02846 1103 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 GALNT17Q6IS24 598 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 GPBP1Q86WP2 473 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 PANK4Q9NVE7 773 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 MTUS1Q9ULD2 1270 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 NBPF26B4DH59 902 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 GDF11O95390 407 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 CALCOCO2Q13137 446 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 NBPF10Q6P3W6 841 aaKnown RBP13.53□□□□□ -0.24
COLCA1-201ENST00000355430 NBPF15Q8N660 670 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 ADGRG1Q9Y653 693 aa13.53□□□□□ -0.24
COLCA1-201ENST00000355430 CTNNA1P35221 906 aaKnown RBP13.52□□□□□ -0.24
COLCA1-201ENST00000355430 CABS1Q96KC9 395 aa13.52□□□□□ -0.24
COLCA1-201ENST00000355430 CCDC77Q9BR77 488 aa13.52□□□□□ -0.24
COLCA1-201ENST00000355430 THAP9Q9H5L6 903 aa13.52□□□□□ -0.24
COLCA1-201ENST00000355430 UTYO14607 1347 aa13.52□□□□□ -0.24
COLCA1-201ENST00000355430 SRGAP2O75044 1071 aa13.52□□□□□ -0.24
COLCA1-201ENST00000355430 EEF2P13639 858 aaKnown RBP13.52□□□□□ -0.24
COLCA1-201ENST00000355430 TRIM49BA6NDI0 452 aa13.52□□□□□ -0.25
COLCA1-201ENST00000355430 GCNT3O95395 438 aa13.52□□□□□ -0.25
COLCA1-201ENST00000355430 RFX5P48382 616 aaPredicted RBP13.52□□□□□ -0.25
COLCA1-201ENST00000355430 GNA14O95837 355 aa13.52□□□□□ -0.25
COLCA1-201ENST00000355430 FMR1Q06787 632 aaKnown RBP eCLIP13.52□□□□□ -0.25
COLCA1-201ENST00000355430 KRT71Q3SY84 523 aa13.52□□□□□ -0.25
COLCA1-201ENST00000355430 ASPRV1Q53RT3 343 aa13.52□□□□□ -0.25
COLCA1-201ENST00000355430 RBM43Q6ZSC3 357 aaKnown RBP13.52□□□□□ -0.25
COLCA1-201ENST00000355430 PNMA8AQ86V59 439 aaPredicted RBP13.52□□□□□ -0.25
COLCA1-201ENST00000355430 METTL13Q8N6R0 699 aa13.52□□□□□ -0.25
COLCA1-201ENST00000355430 U2AF1L4Q8WU68 220 aaKnown RBP13.52□□□□□ -0.25
COLCA1-201ENST00000355430 GPR101Q96P66 508 aaPredicted RBP13.52□□□□□ -0.25
COLCA1-201ENST00000355430 KRT12Q99456 494 aa13.52□□□□□ -0.25
COLCA1-201ENST00000355430 DNM3Q9UQ16 869 aa13.52□□□□□ -0.25
COLCA1-201ENST00000355430 ATP6V0A2Q9Y487 856 aa13.52□□□□□ -0.25
COLCA1-201ENST00000355430 FAM193BQ96PV7 902 aaPredicted RBP13.51□□□□□ -0.25
COLCA1-201ENST00000355430 MRPL44Q9H9J2 332 aaKnown RBP13.51□□□□□ -0.25
COLCA1-201ENST00000355430 TECPR2O15040 1411 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 CNTNAP4Q9C0A0 1308 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 SPOPO43791 374 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 FOSP01100 380 aaPredicted RBP13.51□□□□□ -0.25
COLCA1-201ENST00000355430 BIRC3Q13489 604 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 PDIA6Q15084 440 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 LRRC41Q15345 812 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 WDR44Q5JSH3 913 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 STYK1Q6J9G0 422 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 AMNQ9BXJ7 453 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 IRX2Q9BZI1 471 aaPredicted RBP13.51□□□□□ -0.25
COLCA1-201ENST00000355430 MINPP1Q9UNW1 487 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 CPDO75976 1380 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 PABPN1LA6NDY0 278 aaKnown RBP13.51□□□□□ -0.25
COLCA1-201ENST00000355430 ACTN4O43707 911 aaKnown RBP13.51□□□□□ -0.25
COLCA1-201ENST00000355430 ANTXR2P58335 489 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 EHHADHQ08426 723 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 TRPC3Q13507 836 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 MTMR3Q13615 1198 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 FAM160B2Q86V87 743 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 SYCE1Q8N0S2 351 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 RETREG2Q8NC44 543 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 WRNIP1Q96S55 665 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 MAGEF1Q9HAY2 307 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 CD209Q9NNX6 404 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 NRBP2Q9NSY0 501 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 ZBTB24O43167 697 aaPredicted RBP13.51□□□□□ -0.25
COLCA1-201ENST00000355430 KAZALD1Q96I82 304 aa13.51□□□□□ -0.25
COLCA1-201ENST00000355430 FBXO2Q9UK22 296 aaPredicted RBP13.51□□□□□ -0.25
COLCA1-201ENST00000355430 KCNJ6P48051 423 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 MRPS25P82663 173 aaKnown RBP13.5□□□□□ -0.25
COLCA1-201ENST00000355430 SLC7A5Q01650 507 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 NT5C3AQ9H0P0 336 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 CUEDC2Q9H467 287 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 KRIT1O00522 736 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 ZBED6P86452 979 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 ZBTB8OSQ8IWT0 167 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 SPICE1Q8N0Z3 855 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms