RNA–Protein interactions for RNA: ENST00000355257.7

SNU13-202, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-202ENST00000355257 ZNF174Q15697 407 aa12.49□□□□□ -0.41
SNU13-202ENST00000355257 E2F4Q16254 413 aa12.49□□□□□ -0.41
SNU13-202ENST00000355257 CEP135Q66GS9 1140 aa12.49□□□□□ -0.41
SNU13-202ENST00000355257 BLIDQ8IZY5 108 aa12.49□□□□□ -0.41
SNU13-202ENST00000355257 NEDD1Q8NHV4 660 aa12.49□□□□□ -0.41
SNU13-202ENST00000355257 U2AF1L4Q8WU68 220 aaKnown RBP12.49□□□□□ -0.41
SNU13-202ENST00000355257 SYMPKQ92797 1274 aaKnown RBP12.49□□□□□ -0.41
SNU13-202ENST00000355257 DYNLL2Q96FJ2 89 aa12.49□□□□□ -0.41
SNU13-202ENST00000355257 EPSTI1Q96J88 318 aa12.49□□□□□ -0.41
SNU13-202ENST00000355257 C16orf45Q96MC5 204 aaPredicted RBP12.49□□□□□ -0.41
SNU13-202ENST00000355257 MED15Q96RN5 788 aa12.49□□□□□ -0.41
SNU13-202ENST00000355257 EHD4Q9H223 541 aa12.49□□□□□ -0.41
SNU13-202ENST00000355257 PAK6Q9NQU5 681 aaPredicted RBP12.49□□□□□ -0.41
SNU13-202ENST00000355257 A0A0G2JMZ2 1700 aa12.48□□□□□ -0.41
SNU13-202ENST00000355257 USP27XA6NNY8 438 aa12.48□□□□□ -0.41
SNU13-202ENST00000355257 C19orf81C9J6K1 198 aa12.48□□□□□ -0.41
SNU13-202ENST00000355257 SGPL1O95470 568 aa12.48□□□□□ -0.41
SNU13-202ENST00000355257 TSPY3P0CV98 308 aa12.48□□□□□ -0.41
SNU13-202ENST00000355257 TSPY8P0CW00 308 aa12.48□□□□□ -0.41
SNU13-202ENST00000355257 LONP1P36776 959 aaKnown RBP12.48□□□□□ -0.41
SNU13-202ENST00000355257 SEMA3FQ13275 785 aa12.48□□□□□ -0.41
SNU13-202ENST00000355257 CUL4BQ13620 913 aa12.48□□□□□ -0.41
SNU13-202ENST00000355257 PTPN14Q15678 1187 aa12.48□□□□□ -0.41
SNU13-202ENST00000355257 SLC35G1Q2M3R5 365 aa12.48□□□□□ -0.41
SNU13-202ENST00000355257 E4F1Q66K89 784 aaPredicted RBP12.48□□□□□ -0.41
SNU13-202ENST00000355257 FCHSD1Q86WN1 690 aa12.48□□□□□ -0.41
SNU13-202ENST00000355257 P2RX7Q99572 595 aaKnown RBP12.48□□□□□ -0.41
SNU13-202ENST00000355257 TMEM47Q9BQJ4 181 aa12.48□□□□□ -0.41
SNU13-202ENST00000355257 SPZ1Q9BXG8 430 aa12.48□□□□□ -0.41
SNU13-202ENST00000355257 TXNRD2Q9NNW7 524 aa12.48□□□□□ -0.41
SNU13-202ENST00000355257 EMILIN3Q9NT22 766 aa12.48□□□□□ -0.41
SNU13-202ENST00000355257 INTS13Q9NVM9 706 aa12.48□□□□□ -0.41
SNU13-202ENST00000355257 NFE2L3Q9Y4A8 694 aa12.48□□□□□ -0.41
SNU13-202ENST00000355257 USP17L10C9JJH3 530 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 H0YGN5 161 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 CCP110O43303 1012 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 HLA-DOAP06340 250 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 PIK3AP1Q6ZUJ8 805 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 ZNF710Q8N1W2 664 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 STAG2Q8N3U4 1231 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 PDILTQ8N807 584 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 IQUBQ8NA54 791 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 CCDC148Q8NFR7 591 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 ANKRD7Q92527 254 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 COA7Q96BR5 231 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 DHX58Q96C10 678 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 C12orf42Q96LP6 360 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 CRISPLD2Q9H0B8 497 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 BARHL2Q9NY43 387 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 PCDH10Q9P2E7 1040 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 RBPJLQ9UBG7 517 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 BIN2Q9UBW5 565 aaPredicted RBP12.47□□□□□ -0.41
SNU13-202ENST00000355257 COLQQ9Y215 455 aaPredicted RBP12.47□□□□□ -0.41
SNU13-202ENST00000355257 PLIN4Q96Q06 1357 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 LAD1O00515 517 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 CYTH3O43739 400 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 GH2P01242 217 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 SHMT1P34896 483 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 CDK8P49336 464 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 HERVK_113P62684 666 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 RBM10P98175 930 aaKnown RBP12.47□□□□□ -0.41
SNU13-202ENST00000355257 GABPAQ06546 454 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 IL17AQ16552 155 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 SPATA1Q5VX52 437 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 PDXDC2PQ6P474 469 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 GRAMD1CQ8IYS0 662 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 SERPINB13Q9UIV8 391 aa12.47□□□□□ -0.41
SNU13-202ENST00000355257 TRIOBPQ9H2D6 2365 aa12.46□□□□□ -0.41
SNU13-202ENST00000355257 A0A1B0GTH6 734 aa12.46□□□□□ -0.42
SNU13-202ENST00000355257 VWA3AA6NCI4 1184 aa12.46□□□□□ -0.42
SNU13-202ENST00000355257 PPP1R3GB7ZBB8 358 aa12.46□□□□□ -0.42
SNU13-202ENST00000355257 STXBP3O00186 592 aa12.46□□□□□ -0.42
SNU13-202ENST00000355257 TOP1P11387 765 aaKnown RBP12.46□□□□□ -0.42
SNU13-202ENST00000355257 FXR1P51114 621 aaKnown RBP eCLIP12.46□□□□□ -0.42
SNU13-202ENST00000355257 TRIM32Q13049 653 aa12.46□□□□□ -0.42
SNU13-202ENST00000355257 NR1I3Q14994 352 aa12.46□□□□□ -0.42
SNU13-202ENST00000355257 Q3C1V9 767 aa12.46□□□□□ -0.42
SNU13-202ENST00000355257 WWC2Q6AWC2 1192 aa12.46□□□□□ -0.42
SNU13-202ENST00000355257 TYW1BQ6NUM6 668 aa12.46□□□□□ -0.42
SNU13-202ENST00000355257 APTXQ7Z2E3 356 aaKnown RBP12.46□□□□□ -0.42
SNU13-202ENST00000355257 TMOD4Q9NZQ9 345 aa12.46□□□□□ -0.42
SNU13-202ENST00000355257 PCDHA6Q9UN73 950 aa12.46□□□□□ -0.42
SNU13-202ENST00000355257 PCDHA8Q9Y5H6 950 aa12.46□□□□□ -0.42
SNU13-202ENST00000355257 ADAMTS3O15072 1205 aa12.45□□□□□ -0.42
SNU13-202ENST00000355257 GTPBP6O43824 516 aaPredicted RBP12.45□□□□□ -0.42
SNU13-202ENST00000355257 CNMDO75829 334 aa12.45□□□□□ -0.42
SNU13-202ENST00000355257 FARP2O94887 1054 aaPredicted RBP12.45□□□□□ -0.42
SNU13-202ENST00000355257 PRPHP41219 470 aa12.45□□□□□ -0.42
SNU13-202ENST00000355257 IRX3P78415 501 aaPredicted RBP12.45□□□□□ -0.42
SNU13-202ENST00000355257 CDKAL1Q5VV42 579 aa12.45□□□□□ -0.42
SNU13-202ENST00000355257 USP17L2Q6R6M4 530 aa12.45□□□□□ -0.42
SNU13-202ENST00000355257 TMEM139Q8IV31 216 aa12.45□□□□□ -0.42
SNU13-202ENST00000355257 SLC44A5Q8NCS7 719 aa12.45□□□□□ -0.42
SNU13-202ENST00000355257 TRIB2Q92519 343 aa12.45□□□□□ -0.42
SNU13-202ENST00000355257 USP6NLQ92738 828 aa12.45□□□□□ -0.42
SNU13-202ENST00000355257 PPP1R13BQ96KQ4 1090 aa12.45□□□□□ -0.42
SNU13-202ENST00000355257 DEFB118Q96PH6 123 aa12.45□□□□□ -0.42
SNU13-202ENST00000355257 TRIM34Q9BYJ4 488 aa12.45□□□□□ -0.42
SNU13-202ENST00000355257 ZMYND12Q9H0C1 365 aa12.45□□□□□ -0.42
SNU13-202ENST00000355257 PRO3102Q9H379 93 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms