RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 VAT1LQ9HCJ6 419 aa18.51■□□□□ 0.55
PDGFA-201ENST00000354513 PXMP2Q9NR77 195 aa18.51■□□□□ 0.55
PDGFA-201ENST00000354513 RGS20O76081 388 aa18.5■□□□□ 0.55
PDGFA-201ENST00000354513 GH1P01241 217 aa18.5■□□□□ 0.55
PDGFA-201ENST00000354513 ATP2A2P16615 1042 aaKnown RBP18.5■□□□□ 0.55
PDGFA-201ENST00000354513 PTH1RQ03431 593 aa18.5■□□□□ 0.55
PDGFA-201ENST00000354513 BRDTQ58F21 947 aaPredicted RBP18.5■□□□□ 0.55
PDGFA-201ENST00000354513 SESTD1Q86VW0 696 aa18.5■□□□□ 0.55
PDGFA-201ENST00000354513 IWS1Q96ST2 819 aa18.5■□□□□ 0.55
PDGFA-201ENST00000354513 CNNM2Q9H8M5 875 aa18.5■□□□□ 0.55
PDGFA-201ENST00000354513 CTNNA3Q9UI47 895 aa18.5■□□□□ 0.55
PDGFA-201ENST00000354513 DDX41Q9UJV9 622 aaKnown RBP18.5■□□□□ 0.55
PDGFA-201ENST00000354513 MRPL11Q9Y3B7 192 aaKnown RBP18.5■□□□□ 0.55
PDGFA-201ENST00000354513 PALM3A6NDB9 673 aaPredicted RBP18.49■□□□□ 0.55
PDGFA-201ENST00000354513 B4DLN1 442 aa18.49■□□□□ 0.55
PDGFA-201ENST00000354513 RFC2P35250 354 aa18.49■□□□□ 0.55
PDGFA-201ENST00000354513 MRPL12P52815 198 aaKnown RBP18.49■□□□□ 0.55
PDGFA-201ENST00000354513 STXBP2Q15833 593 aa18.49■□□□□ 0.55
PDGFA-201ENST00000354513 TCTN1Q2MV58 587 aa18.49■□□□□ 0.55
PDGFA-201ENST00000354513 TJAP1Q5JTD0 557 aa18.49■□□□□ 0.55
PDGFA-201ENST00000354513 IFIT1BQ5T764 474 aaKnown RBP18.49■□□□□ 0.55
PDGFA-201ENST00000354513 PPP2R2DQ66LE6 453 aa18.49■□□□□ 0.55
PDGFA-201ENST00000354513 MCF2L2Q86YR7 1114 aa18.49■□□□□ 0.55
PDGFA-201ENST00000354513 IL31RAQ8NI17 732 aa18.49■□□□□ 0.55
PDGFA-201ENST00000354513 EMID1Q96A84 441 aaPredicted RBP18.49■□□□□ 0.55
PDGFA-201ENST00000354513 EPOPA6NHQ4 379 aa18.49■□□□□ 0.55
PDGFA-201ENST00000354513 KLRF2D3W0D1 207 aa18.49■□□□□ 0.55
PDGFA-201ENST00000354513 DHX16O60231 1041 aaKnown RBP18.49■□□□□ 0.55
PDGFA-201ENST00000354513 CFBP00751 764 aa18.49■□□□□ 0.55
PDGFA-201ENST00000354513 CA3P07451 260 aa18.49■□□□□ 0.55
PDGFA-201ENST00000354513 CYP21A2P08686 494 aa18.49■□□□□ 0.55
PDGFA-201ENST00000354513 CCDC85BQ15834 202 aaPredicted RBP18.49■□□□□ 0.55
PDGFA-201ENST00000354513 STOX1Q6ZVD7 989 aa18.49■□□□□ 0.55
PDGFA-201ENST00000354513 CHST3Q7LGC8 479 aa18.49■□□□□ 0.55
PDGFA-201ENST00000354513 UBAC1Q9BSL1 405 aa18.49■□□□□ 0.55
PDGFA-201ENST00000354513 AMNQ9BXJ7 453 aa18.49■□□□□ 0.55
PDGFA-201ENST00000354513 ATG2AQ2TAZ0 1938 aa18.48■□□□□ 0.55
PDGFA-201ENST00000354513 HAS3O00219 553 aa18.48■□□□□ 0.55
PDGFA-201ENST00000354513 CYTH3O43739 400 aa18.48■□□□□ 0.55
PDGFA-201ENST00000354513 NR3C2P08235 984 aa18.48■□□□□ 0.55
PDGFA-201ENST00000354513 HOXD8P13378 290 aaPredicted RBP18.48■□□□□ 0.55
PDGFA-201ENST00000354513 RBL2Q08999 1139 aa18.48■□□□□ 0.55
PDGFA-201ENST00000354513 HIC1Q14526 733 aa18.48■□□□□ 0.55
PDGFA-201ENST00000354513 GRM4Q14833 912 aa18.48■□□□□ 0.55
PDGFA-201ENST00000354513 PTGISQ16647 500 aa18.48■□□□□ 0.55
PDGFA-201ENST00000354513 ARHGEF16Q5VV41 709 aa18.48■□□□□ 0.55
PDGFA-201ENST00000354513 TRAF7Q6Q0C0 670 aa18.48■□□□□ 0.55
PDGFA-201ENST00000354513 SPRED2Q7Z698 418 aa18.48■□□□□ 0.55
PDGFA-201ENST00000354513 WNT8BQ93098 351 aa18.48■□□□□ 0.55
PDGFA-201ENST00000354513 PDCD2LQ9BRP1 358 aa18.48■□□□□ 0.55
PDGFA-201ENST00000354513 THEGQ9P2T0 379 aa18.48■□□□□ 0.55
PDGFA-201ENST00000354513 GTF2IRD1Q9UHL9 959 aa18.48■□□□□ 0.55
PDGFA-201ENST00000354513 NLRC5Q86WI3 1866 aa18.47■□□□□ 0.55
PDGFA-201ENST00000354513 TTC28Q96AY4 2481 aa18.47■□□□□ 0.55
PDGFA-201ENST00000354513 RFXAPO00287 272 aa18.47■□□□□ 0.55
PDGFA-201ENST00000354513 ZBTB5O15062 677 aa18.47■□□□□ 0.55
PDGFA-201ENST00000354513 EIF3JO75822 258 aaKnown RBP18.47■□□□□ 0.55
PDGFA-201ENST00000354513 F2P00734 622 aa18.47■□□□□ 0.55
PDGFA-201ENST00000354513 ZNF286BP0CG31 522 aa18.47■□□□□ 0.55
PDGFA-201ENST00000354513 IGFBP4P22692 258 aa18.47■□□□□ 0.55
PDGFA-201ENST00000354513 CHMP4BP1P59074 171 aa18.47■□□□□ 0.55
PDGFA-201ENST00000354513 TRIM71Q2Q1W2 868 aaKnown RBP18.47■□□□□ 0.55
PDGFA-201ENST00000354513 GPKOWQ92917 476 aaPredicted RBP eCLIP18.47■□□□□ 0.55
PDGFA-201ENST00000354513 SLC9A7Q96T83 725 aa18.47■□□□□ 0.55
PDGFA-201ENST00000354513 RIOX1Q9H6W3 641 aa18.47■□□□□ 0.55
PDGFA-201ENST00000354513 HDAC6Q9UBN7 1215 aa18.47■□□□□ 0.55
PDGFA-201ENST00000354513 PRRC2BQ5JSZ5 2229 aaKnown RBP18.46■□□□□ 0.55
PDGFA-201ENST00000354513 CHMLP26374 656 aa18.46■□□□□ 0.55
PDGFA-201ENST00000354513 HOXA13P31271 388 aaPredicted RBP18.46■□□□□ 0.55
PDGFA-201ENST00000354513 PSEN2P49810 448 aa18.46■□□□□ 0.55
PDGFA-201ENST00000354513 ANTXR2P58335 489 aa18.46■□□□□ 0.55
PDGFA-201ENST00000354513 SP2Q02086 613 aa18.46■□□□□ 0.55
PDGFA-201ENST00000354513 BFSP2Q13515 415 aa18.46■□□□□ 0.55
PDGFA-201ENST00000354513 PGM5Q15124 567 aa18.46■□□□□ 0.55
PDGFA-201ENST00000354513 HERC6Q8IVU3 1022 aa18.46■□□□□ 0.55
PDGFA-201ENST00000354513 AFAP1L1Q8TED9 768 aa18.46■□□□□ 0.55
PDGFA-201ENST00000354513 SYMPKQ92797 1274 aaKnown RBP18.46■□□□□ 0.55
PDGFA-201ENST00000354513 PIGSQ96S52 555 aa18.46■□□□□ 0.55
PDGFA-201ENST00000354513 SUPT16HQ9Y5B9 1047 aaKnown RBP18.46■□□□□ 0.55
PDGFA-201ENST00000354513 MRVI1Q9Y6F6 885 aa18.46■□□□□ 0.55
PDGFA-201ENST00000354513 NBNO60934 754 aa18.45■□□□□ 0.54
PDGFA-201ENST00000354513 ACTN1P12814 892 aa18.45■□□□□ 0.54
PDGFA-201ENST00000354513 TAP1Q03518 808 aa18.45■□□□□ 0.54
PDGFA-201ENST00000354513 TROAPQ12815 778 aa18.45■□□□□ 0.54
PDGFA-201ENST00000354513 DGKDQ16760 1214 aa18.45■□□□□ 0.54
PDGFA-201ENST00000354513 TMEM67Q5HYA8 995 aa18.45■□□□□ 0.54
PDGFA-201ENST00000354513 TMCO2Q7Z6W1 182 aaPredicted RBP18.45■□□□□ 0.54
PDGFA-201ENST00000354513 RETREG2Q8NC44 543 aa18.45■□□□□ 0.54
PDGFA-201ENST00000354513 PPTC7Q8NI37 304 aa18.45■□□□□ 0.54
PDGFA-201ENST00000354513 CAGE1Q8TC20 777 aa18.45■□□□□ 0.54
PDGFA-201ENST00000354513 ATXN2LQ8WWM7 1075 aaKnown RBP18.45■□□□□ 0.54
PDGFA-201ENST00000354513 ZFP91Q96JP5 570 aaPredicted RBP18.45■□□□□ 0.54
PDGFA-201ENST00000354513 BCAS3Q9H6U6 928 aa18.45■□□□□ 0.54
PDGFA-201ENST00000354513 CERS4Q9HA82 394 aa18.45■□□□□ 0.54
PDGFA-201ENST00000354513 FRMPD4Q14CM0 1322 aa18.45■□□□□ 0.54
PDGFA-201ENST00000354513 SORBS3O60504 671 aa18.44■□□□□ 0.54
PDGFA-201ENST00000354513 CXCL10P02778 98 aa18.44■□□□□ 0.54
PDGFA-201ENST00000354513 MYCLP12524 364 aaPredicted RBP18.44■□□□□ 0.54
PDGFA-201ENST00000354513 CASTP20810 708 aaKnown RBP18.44■□□□□ 0.54
PDGFA-201ENST00000354513 WDR5P61964 334 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms