RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 NUTM2EB1AL46 878 aaPredicted RBP10.66□□□□□ -0.7
RPE-201ENST00000354506 RPS6KA4O75676 772 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 LDHBP07195 334 aaKnown RBP10.66□□□□□ -0.7
RPE-201ENST00000354506 TECP42680 631 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 GUCY2FP51841 1108 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 NONOQ15233 471 aaKnown RBP eCLIP10.66□□□□□ -0.7
RPE-201ENST00000354506 TRADDQ15628 312 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 NEK8Q86SG6 692 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 C2CD5Q86YS7 1000 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 ZNF444Q8N0Y2 327 aaPredicted RBP10.66□□□□□ -0.7
RPE-201ENST00000354506 SETDB2Q96T68 719 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 SELENOOQ9BVL4 669 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 TSGA10Q9BZW7 698 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 TANGO6Q9C0B7 1094 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 LEMD3Q9Y2U8 911 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 NHSQ6T4R5 1651 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 ASIC1P78348 528 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 CKAP4Q07065 602 aaKnown RBP10.66□□□□□ -0.7
RPE-201ENST00000354506 MAP9Q49MG5 647 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 VWA3BQ502W6 1294 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 AMIGO3Q86WK7 504 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 GLIS3Q8NEA6 775 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 TGFBRAP1Q8WUH2 860 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 DEF6Q9H4E7 631 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 SH2D4AQ9H788 454 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 SNX12Q9UMY4 172 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 JRKLQ9Y4A0 524 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 ATAD5Q96QE3 1844 aa10.66□□□□□ -0.7
RPE-201ENST00000354506 GPR75-ASB3A0A0A6YYF3 556 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 KDM4FA0A1W2PPD8 638 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 MYMKA6NI61 221 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 PJA2O43164 708 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 IPO7O95373 1038 aaKnown RBP10.65□□□□□ -0.7
RPE-201ENST00000354506 SSBP05455 408 aaKnown RBP eCLIP10.65□□□□□ -0.7
RPE-201ENST00000354506 ADRA2BP18089 450 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 GNA11P29992 359 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 CDK8P49336 464 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 AMPD3Q01432 767 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 CACNB1Q02641 598 aaPredicted RBP10.65□□□□□ -0.7
RPE-201ENST00000354506 DIXDC1Q155Q3 683 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 FBXW10Q5XX13 1052 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 FNBP4Q8N3X1 1017 aaPredicted RBP10.65□□□□□ -0.7
RPE-201ENST00000354506 AENQ8WTP8 325 aaKnown RBP10.65□□□□□ -0.7
RPE-201ENST00000354506 BAP1Q92560 729 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 RUBCNQ92622 972 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 SRP68Q9UHB9 627 aaKnown RBP10.65□□□□□ -0.7
RPE-201ENST00000354506 BAG3O95817 575 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 KRT14P02533 472 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 HOXA7P31268 230 aaPredicted RBP10.65□□□□□ -0.7
RPE-201ENST00000354506 MYH10P35580 1976 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 GSTO1P78417 241 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 PDCLQ13371 301 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 PDIA5Q14554 519 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 TPTE2Q6XPS3 522 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 UNC13DQ70J99 1090 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 TBCKQ8TEA7 893 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 ZNHIT6Q9NWK9 470 aaKnown RBP10.65□□□□□ -0.7
RPE-201ENST00000354506 PCDHA13Q9Y5I0 950 aa10.65□□□□□ -0.7
RPE-201ENST00000354506 ATP2C2O75185 946 aa10.65□□□□□ -0.71
RPE-201ENST00000354506 EIF6P56537 245 aaKnown RBP10.65□□□□□ -0.71
RPE-201ENST00000354506 LRRC55Q6ZSA7 311 aa10.65□□□□□ -0.71
RPE-201ENST00000354506 NBPF5PQ86XG9 351 aaPredicted RBP10.65□□□□□ -0.71
RPE-201ENST00000354506 POTEDQ86YR6 584 aa10.65□□□□□ -0.71
RPE-201ENST00000354506 ARL8AQ96BM9 186 aa10.65□□□□□ -0.71
RPE-201ENST00000354506 FAM163AQ96GL9 167 aaPredicted RBP10.65□□□□□ -0.71
RPE-201ENST00000354506 NDST4Q9H3R1 872 aa10.65□□□□□ -0.71
RPE-201ENST00000354506 C6orf50Q9HD87 102 aa10.65□□□□□ -0.71
RPE-201ENST00000354506 RBAK-RBAKDNI3L0D1 243 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 SHOX2O60902 331 aaPredicted RBP10.64□□□□□ -0.71
RPE-201ENST00000354506 USP17L2Q6R6M4 530 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 ARHGAP27Q6ZUM4 889 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 PTF1AQ7RTS3 328 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 GUF1Q8N442 669 aaKnown RBP10.64□□□□□ -0.71
RPE-201ENST00000354506 SECISBP2LQ93073 1101 aaKnown RBP10.64□□□□□ -0.71
RPE-201ENST00000354506 STK17AQ9UEE5 414 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 PLIN4Q96Q06 1357 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 TAF1LQ8IZX4 1826 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 GOLGA6CA6NDK9 693 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 GOLGA6DP0CG33 693 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 NAPAP54920 295 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 RHBDL3P58872 404 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 KIF5AQ12840 1032 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 TTC31Q49AM3 519 aaPredicted RBP10.64□□□□□ -0.71
RPE-201ENST00000354506 TMEM119Q4V9L6 283 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 TDRD12Q587J7 1177 aaKnown RBP10.64□□□□□ -0.71
RPE-201ENST00000354506 HGSNATQ68CP4 663 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 TRIM58Q8NG06 486 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 BCAS4Q8TDM0 211 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 CCDC42Q96M95 316 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 GOLGA6AQ9NYA3 693 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 SALL4Q9UJQ4 1053 aa10.64□□□□□ -0.71
RPE-201ENST00000354506 GOLGA6BA6NDN3 693 aa10.63□□□□□ -0.71
RPE-201ENST00000354506 AKR1B10O60218 316 aa10.63□□□□□ -0.71
RPE-201ENST00000354506 IVLP07476 585 aa10.63□□□□□ -0.71
RPE-201ENST00000354506 SNHG28P0DPA3 235 aa10.63□□□□□ -0.71
RPE-201ENST00000354506 CLK2P49760 499 aaKnown RBP10.63□□□□□ -0.71
RPE-201ENST00000354506 GTF2A1P52655 376 aaPredicted RBP10.63□□□□□ -0.71
RPE-201ENST00000354506 GNGT1P63211 74 aa10.63□□□□□ -0.71
RPE-201ENST00000354506 KCNMA1Q12791 1236 aa10.63□□□□□ -0.71
RPE-201ENST00000354506 GRAPQ13588 217 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms