RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 SIK3Q9Y2K2 1263 aa24.63■■□□□ 1.53
UPF3A-201ENST00000351487 KRT86O43790 486 aa24.63■■□□□ 1.53
UPF3A-201ENST00000351487 TRIM37O94972 964 aa24.63■■□□□ 1.53
UPF3A-201ENST00000351487 SLC16A2P36021 539 aa24.63■■□□□ 1.53
UPF3A-201ENST00000351487 NFIAQ12857 509 aa24.63■■□□□ 1.53
UPF3A-201ENST00000351487 LONRF2Q1L5Z9 754 aa24.63■■□□□ 1.53
UPF3A-201ENST00000351487 PROM2Q8N271 834 aa24.63■■□□□ 1.53
UPF3A-201ENST00000351487 PCMTD1Q96MG8 357 aaPredicted RBP24.63■■□□□ 1.53
UPF3A-201ENST00000351487 NDST4Q9H3R1 872 aa24.63■■□□□ 1.53
UPF3A-201ENST00000351487 MPHOSPH10O00566 681 aaKnown RBP24.62■■□□□ 1.53
UPF3A-201ENST00000351487 TFRCP02786 760 aaKnown RBP24.62■■□□□ 1.53
UPF3A-201ENST00000351487 LRRC55Q6ZSA7 311 aa24.62■■□□□ 1.53
UPF3A-201ENST00000351487 KCTD1Q719H9 257 aa24.62■■□□□ 1.53
UPF3A-201ENST00000351487 KIAA1328Q86T90 577 aa24.62■■□□□ 1.53
UPF3A-201ENST00000351487 NLGN1Q8N2Q7 840 aa24.62■■□□□ 1.53
UPF3A-201ENST00000351487 JAKMIP2Q96AA8 810 aa24.62■■□□□ 1.53
UPF3A-201ENST00000351487 ZDHHC15Q96MV8 337 aa24.62■■□□□ 1.53
UPF3A-201ENST00000351487 DNAJC18Q9H819 358 aa24.62■■□□□ 1.53
UPF3A-201ENST00000351487 ZNF646O15015 1829 aaPredicted RBP24.62■■□□□ 1.53
UPF3A-201ENST00000351487 KDM3AQ9Y4C1 1321 aa24.62■■□□□ 1.53
UPF3A-201ENST00000351487 IPO7O95373 1038 aaKnown RBP24.62■■□□□ 1.53
UPF3A-201ENST00000351487 ZNF771Q7L3S4 317 aaPredicted RBP24.62■■□□□ 1.53
UPF3A-201ENST00000351487 PURBQ96QR8 312 aaKnown RBP24.62■■□□□ 1.53
UPF3A-201ENST00000351487 PLAGL2Q9UPG8 496 aa24.62■■□□□ 1.53
UPF3A-201ENST00000351487 CRKP46108 304 aa24.61■■□□□ 1.53
UPF3A-201ENST00000351487 ECM1Q16610 540 aa24.61■■□□□ 1.53
UPF3A-201ENST00000351487 PAPD7Q5XG87 772 aaKnown RBP24.61■■□□□ 1.53
UPF3A-201ENST00000351487 MKL1Q969V6 931 aa24.61■■□□□ 1.53
UPF3A-201ENST00000351487 DNAJC19Q96DA6 116 aa24.61■■□□□ 1.53
UPF3A-201ENST00000351487 PNKPQ96T60 521 aa24.61■■□□□ 1.53
UPF3A-201ENST00000351487 EP400Q96L91 3159 aa24.61■■□□□ 1.53
UPF3A-201ENST00000351487 SLC26A4O43511 780 aa24.61■■□□□ 1.53
UPF3A-201ENST00000351487 TUBBP07437 444 aa24.61■■□□□ 1.53
UPF3A-201ENST00000351487 IDEP14735 1019 aa24.61■■□□□ 1.53
UPF3A-201ENST00000351487 NT5C3AQ9H0P0 336 aa24.61■■□□□ 1.53
UPF3A-201ENST00000351487 ZHX1Q9UKY1 873 aaPredicted RBP24.61■■□□□ 1.53
UPF3A-201ENST00000351487 MAP2K7O14733 419 aa24.6■■□□□ 1.53
UPF3A-201ENST00000351487 ATP2B2Q01814 1243 aa24.6■■□□□ 1.53
UPF3A-201ENST00000351487 CCDC84Q86UT8 332 aaPredicted RBP24.6■■□□□ 1.53
UPF3A-201ENST00000351487 DCAF4Q8WV16 495 aa24.6■■□□□ 1.53
UPF3A-201ENST00000351487 MRIQ9BWK5 157 aa24.6■■□□□ 1.53
UPF3A-201ENST00000351487 DHX36Q9H2U1 1008 aaKnown RBP24.6■■□□□ 1.53
UPF3A-201ENST00000351487 PCDHA12Q9UN75 941 aa24.6■■□□□ 1.53
UPF3A-201ENST00000351487 BEND6Q5SZJ8 279 aaPredicted RBP24.59■■□□□ 1.53
UPF3A-201ENST00000351487 PODNQ7Z5L7 613 aa24.59■■□□□ 1.53
UPF3A-201ENST00000351487 NYAP2Q9P242 653 aa24.59■■□□□ 1.53
UPF3A-201ENST00000351487 PDE6BP35913 854 aa24.59■■□□□ 1.53
UPF3A-201ENST00000351487 COASYQ13057 564 aa24.59■■□□□ 1.53
UPF3A-201ENST00000351487 ZCWPW2Q504Y3 356 aa24.59■■□□□ 1.53
UPF3A-201ENST00000351487 KRT27Q7Z3Y8 459 aa24.59■■□□□ 1.53
UPF3A-201ENST00000351487 ZFPM1Q8IX07 1006 aa24.59■■□□□ 1.53
UPF3A-201ENST00000351487 TSG101Q99816 390 aa24.59■■□□□ 1.53
UPF3A-201ENST00000351487 LACRTQ9GZZ8 138 aa24.59■■□□□ 1.53
UPF3A-201ENST00000351487 RCCD1A6NED2 376 aa24.58■■□□□ 1.53
UPF3A-201ENST00000351487 ERLIN1O75477 346 aa24.58■■□□□ 1.53
UPF3A-201ENST00000351487 VAV2P52735 878 aa24.58■■□□□ 1.53
UPF3A-201ENST00000351487 QRICH1Q2TAL8 776 aa24.58■■□□□ 1.53
UPF3A-201ENST00000351487 NCAPH2Q6IBW4 605 aa24.58■■□□□ 1.53
UPF3A-201ENST00000351487 TFR2Q9UP52 801 aa24.58■■□□□ 1.53
UPF3A-201ENST00000351487 ANO9A1A5B4 782 aa24.58■■□□□ 1.52
UPF3A-201ENST00000351487 G3V3G9 751 aa24.58■■□□□ 1.52
UPF3A-201ENST00000351487 ATP1A1P05023 1023 aaKnown RBP24.58■■□□□ 1.52
UPF3A-201ENST00000351487 USP11P51784 963 aa24.58■■□□□ 1.52
UPF3A-201ENST00000351487 FKBP1AP62942 108 aaKnown RBP24.58■■□□□ 1.52
UPF3A-201ENST00000351487 SMC1AQ14683 1233 aaKnown RBP24.58■■□□□ 1.52
UPF3A-201ENST00000351487 DCAF8Q5TAQ9 597 aa24.58■■□□□ 1.52
UPF3A-201ENST00000351487 MYOCDQ8IZQ8 938 aa24.58■■□□□ 1.52
UPF3A-201ENST00000351487 MSL3Q8N5Y2 521 aaKnown RBP24.58■■□□□ 1.52
UPF3A-201ENST00000351487 MASTLQ96GX5 879 aa24.58■■□□□ 1.52
UPF3A-201ENST00000351487 MBOAT7Q96N66 472 aa24.58■■□□□ 1.52
UPF3A-201ENST00000351487 TSGA10Q9BZW7 698 aa24.58■■□□□ 1.52
UPF3A-201ENST00000351487 KCNMB3Q9NPA1 279 aa24.58■■□□□ 1.52
UPF3A-201ENST00000351487 SAR1BQ9Y6B6 198 aa24.58■■□□□ 1.52
UPF3A-201ENST00000351487 MOXD1Q6UVY6 613 aa24.57■■□□□ 1.52
UPF3A-201ENST00000351487 IDI2Q9BXS1 227 aa24.57■■□□□ 1.52
UPF3A-201ENST00000351487 TMX4Q9H1E5 349 aaPredicted RBP24.57■■□□□ 1.52
UPF3A-201ENST00000351487 QTRT2Q9H974 415 aaKnown RBP24.57■■□□□ 1.52
UPF3A-201ENST00000351487 KANSL2Q9H9L4 492 aa24.57■■□□□ 1.52
UPF3A-201ENST00000351487 SCN9AQ15858 1988 aa24.57■■□□□ 1.52
UPF3A-201ENST00000351487 CYP3A7-CYP3A51PA0A087WV96 503 aa24.57■■□□□ 1.52
UPF3A-201ENST00000351487 EPHB6O15197 1021 aa24.57■■□□□ 1.52
UPF3A-201ENST00000351487 MARCH6O60337 910 aa24.57■■□□□ 1.52
UPF3A-201ENST00000351487 CYP3A7P24462 503 aa24.57■■□□□ 1.52
UPF3A-201ENST00000351487 NOA1Q8NC60 698 aaKnown RBP24.57■■□□□ 1.52
UPF3A-201ENST00000351487 GLIS3Q8NEA6 775 aa24.57■■□□□ 1.52
UPF3A-201ENST00000351487 CCDC42Q96M95 316 aa24.57■■□□□ 1.52
UPF3A-201ENST00000351487 ENC1O14682 589 aa24.56■■□□□ 1.52
UPF3A-201ENST00000351487 LCA5LO95447 670 aa24.56■■□□□ 1.52
UPF3A-201ENST00000351487 SLURP2P0DP57 97 aa24.56■■□□□ 1.52
UPF3A-201ENST00000351487 EEF2P13639 858 aaKnown RBP24.56■■□□□ 1.52
UPF3A-201ENST00000351487 HDLBPQ00341 1268 aaKnown RBP24.56■■□□□ 1.52
UPF3A-201ENST00000351487 FAM26FQ5R3K3 315 aa24.56■■□□□ 1.52
UPF3A-201ENST00000351487 ANO3Q9BYT9 981 aa24.56■■□□□ 1.52
UPF3A-201ENST00000351487 PCDHA1Q9Y5I3 950 aa24.56■■□□□ 1.52
UPF3A-201ENST00000351487 ZNF263O14978 683 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 NPM3O75607 178 aaKnown RBP24.55■■□□□ 1.52
UPF3A-201ENST00000351487 SLC1A4P43007 532 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 AP3B2Q13367 1082 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 ARHGAP27Q6ZUM4 889 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 COL23A1Q86Y22 540 aaPredicted RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms