RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 FAM193AP78312 1265 aa18.49■□□□□ 0.55
PDAP1-201ENST00000350498 DCAF8Q5TAQ9 597 aa18.49■□□□□ 0.55
PDAP1-201ENST00000350498 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.49■□□□□ 0.55
PDAP1-201ENST00000350498 SV2BQ7L1I2 683 aa18.49■□□□□ 0.55
PDAP1-201ENST00000350498 KRT26Q7Z3Y9 468 aa18.49■□□□□ 0.55
PDAP1-201ENST00000350498 TXLNBQ8N3L3 684 aa18.49■□□□□ 0.55
PDAP1-201ENST00000350498 LARP4BQ92615 738 aaKnown RBP18.49■□□□□ 0.55
PDAP1-201ENST00000350498 CCDC102AQ96A19 550 aa18.49■□□□□ 0.55
PDAP1-201ENST00000350498 DHTKD1Q96HY7 919 aaPredicted RBP18.49■□□□□ 0.55
PDAP1-201ENST00000350498 NOC4LQ9BVI4 516 aaKnown RBP18.49■□□□□ 0.55
PDAP1-201ENST00000350498 TTYH3Q9C0H2 523 aa18.49■□□□□ 0.55
PDAP1-201ENST00000350498 CAPN11Q9UMQ6 739 aa18.49■□□□□ 0.55
PDAP1-201ENST00000350498 SSBP05455 408 aaKnown RBP eCLIP18.48■□□□□ 0.55
PDAP1-201ENST00000350498 RBM5P52756 815 aaKnown RBP eCLIP18.48■□□□□ 0.55
PDAP1-201ENST00000350498 JAG1P78504 1218 aa18.48■□□□□ 0.55
PDAP1-201ENST00000350498 MRPS25P82663 173 aaKnown RBP18.48■□□□□ 0.55
PDAP1-201ENST00000350498 ASPRV1Q53RT3 343 aa18.48■□□□□ 0.55
PDAP1-201ENST00000350498 SH3BP5LQ7L8J4 393 aa18.48■□□□□ 0.55
PDAP1-201ENST00000350498 KRT27Q7Z3Y8 459 aa18.48■□□□□ 0.55
PDAP1-201ENST00000350498 HNRNPLLQ8WVV9 542 aaKnown RBP18.48■□□□□ 0.55
PDAP1-201ENST00000350498 PNMA6FA0A0J9YX94 578 aa18.48■□□□□ 0.55
PDAP1-201ENST00000350498 MMP10P09238 476 aa18.48■□□□□ 0.55
PDAP1-201ENST00000350498 STAT3P40763 770 aa18.48■□□□□ 0.55
PDAP1-201ENST00000350498 CCDC122Q5T0U0 273 aa18.48■□□□□ 0.55
PDAP1-201ENST00000350498 SLC30A10Q6XR72 485 aa18.48■□□□□ 0.55
PDAP1-201ENST00000350498 RIN2Q8WYP3 895 aaPredicted RBP18.48■□□□□ 0.55
PDAP1-201ENST00000350498 DDX12PQ92771 950 aa18.48■□□□□ 0.55
PDAP1-201ENST00000350498 DNAJC7Q99615 494 aa18.48■□□□□ 0.55
PDAP1-201ENST00000350498 ESYT2A0FGR8 921 aa18.47■□□□□ 0.55
PDAP1-201ENST00000350498 E9PMD0 336 aa18.47■□□□□ 0.55
PDAP1-201ENST00000350498 GDF11O95390 407 aa18.47■□□□□ 0.55
PDAP1-201ENST00000350498 CRKP46108 304 aa18.47■□□□□ 0.55
PDAP1-201ENST00000350498 APBA1Q02410 837 aa18.47■□□□□ 0.55
PDAP1-201ENST00000350498 CERS3Q8IU89 383 aa18.47■□□□□ 0.55
PDAP1-201ENST00000350498 SMCR8Q8TEV9 937 aaPredicted RBP18.47■□□□□ 0.55
PDAP1-201ENST00000350498 FAM207AQ9NSI2 230 aaPredicted RBP18.47■□□□□ 0.55
PDAP1-201ENST00000350498 DDX25Q9UHL0 483 aaKnown RBP18.47■□□□□ 0.55
PDAP1-201ENST00000350498 EEF2P13639 858 aaKnown RBP18.47■□□□□ 0.55
PDAP1-201ENST00000350498 SMARCA1P28370 1054 aa18.47■□□□□ 0.55
PDAP1-201ENST00000350498 SLC27A3Q5K4L6 730 aa18.47■□□□□ 0.55
PDAP1-201ENST00000350498 CDK5RAP3Q96JB5 506 aa18.47■□□□□ 0.55
PDAP1-201ENST00000350498 PLEKHA4Q9H4M7 779 aa18.47■□□□□ 0.55
PDAP1-201ENST00000350498 BCAS3Q9H6U6 928 aa18.47■□□□□ 0.55
PDAP1-201ENST00000350498 RIC8AQ9NPQ8 531 aa18.47■□□□□ 0.55
PDAP1-201ENST00000350498 SMCHD1A6NHR9 2005 aa18.46■□□□□ 0.55
PDAP1-201ENST00000350498 MYH4Q9Y623 1939 aa18.46■□□□□ 0.55
PDAP1-201ENST00000350498 TULP2O00295 520 aa18.46■□□□□ 0.55
PDAP1-201ENST00000350498 TRIM66O15016 1216 aa18.46■□□□□ 0.55
PDAP1-201ENST00000350498 CLK2P49760 499 aaKnown RBP18.46■□□□□ 0.55
PDAP1-201ENST00000350498 DNM2P50570 870 aa18.46■□□□□ 0.55
PDAP1-201ENST00000350498 WHAMMP3Q1A5X7 153 aa18.46■□□□□ 0.55
PDAP1-201ENST00000350498 TRAPPC11Q7Z392 1133 aa18.46■□□□□ 0.55
PDAP1-201ENST00000350498 SIAH1Q8IUQ4 282 aa18.46■□□□□ 0.55
PDAP1-201ENST00000350498 BRWD3Q6RI45 1802 aa18.46■□□□□ 0.55
PDAP1-201ENST00000350498 PLIN4Q96Q06 1357 aa18.46■□□□□ 0.55
PDAP1-201ENST00000350498 MACROD2A1Z1Q3 448 aa18.46■□□□□ 0.55
PDAP1-201ENST00000350498 VGLL3A8MV65 326 aa18.46■□□□□ 0.55
PDAP1-201ENST00000350498 ZNF263O14978 683 aa18.46■□□□□ 0.55
PDAP1-201ENST00000350498 FXR2P51116 673 aaKnown RBP eCLIP18.46■□□□□ 0.552e-7■□□□□ 10.6
PDAP1-201ENST00000350498 QRICH1Q2TAL8 776 aa18.46■□□□□ 0.55
PDAP1-201ENST00000350498 ZSCAN29Q8IWY8 852 aaPredicted RBP18.46■□□□□ 0.55
PDAP1-201ENST00000350498 RAD54LQ92698 747 aa18.46■□□□□ 0.55
PDAP1-201ENST00000350498 TEKT1Q969V4 418 aa18.46■□□□□ 0.55
PDAP1-201ENST00000350498 CUEDC2Q9H467 287 aa18.46■□□□□ 0.55
PDAP1-201ENST00000350498 PSTPIP2Q9H939 334 aa18.46■□□□□ 0.55
PDAP1-201ENST00000350498 A0A1W2PQC6 194 aa18.45■□□□□ 0.54
PDAP1-201ENST00000350498 PDE2AO00408 941 aaPredicted RBP18.45■□□□□ 0.54
PDAP1-201ENST00000350498 MYL1P05976 194 aa18.45■□□□□ 0.54
PDAP1-201ENST00000350498 MYBL2P10244 700 aa18.45■□□□□ 0.54
PDAP1-201ENST00000350498 NT5C2P49902 561 aa18.45■□□□□ 0.54
PDAP1-201ENST00000350498 GPS2Q13227 327 aa18.45■□□□□ 0.54
PDAP1-201ENST00000350498 SEPT2Q15019 361 aa18.45■□□□□ 0.54
PDAP1-201ENST00000350498 EXOC4Q96A65 974 aa18.45■□□□□ 0.54
PDAP1-201ENST00000350498 NHEJ1Q9H9Q4 299 aaPredicted RBP18.45■□□□□ 0.54
PDAP1-201ENST00000350498 FAM198AQ9UFP1 575 aa18.45■□□□□ 0.54
PDAP1-201ENST00000350498 LRRC37AA6NMS7 1700 aa18.45■□□□□ 0.54
PDAP1-201ENST00000350498 ZBTB5O15062 677 aa18.45■□□□□ 0.54
PDAP1-201ENST00000350498 ERLIN1O75477 346 aa18.45■□□□□ 0.54
PDAP1-201ENST00000350498 TRIM14Q14142 442 aa18.45■□□□□ 0.54
PDAP1-201ENST00000350498 SKIDA1Q1XH10 827 aa18.45■□□□□ 0.54
PDAP1-201ENST00000350498 CENPPQ6IPU0 288 aa18.45■□□□□ 0.54
PDAP1-201ENST00000350498 SCN9AQ15858 1988 aa18.44■□□□□ 0.54
PDAP1-201ENST00000350498 MYH10P35580 1976 aa18.44■□□□□ 0.54
PDAP1-201ENST00000350498 POTEB3A0JP26 581 aa18.44■□□□□ 0.54
PDAP1-201ENST00000350498 POTECB2RU33 542 aa18.44■□□□□ 0.54
PDAP1-201ENST00000350498 ANKRD65E5RJM6 399 aa18.44■□□□□ 0.54
PDAP1-201ENST00000350498 MARCH6O60337 910 aa18.44■□□□□ 0.54
PDAP1-201ENST00000350498 CHRNA5P30532 468 aa18.44■□□□□ 0.54
PDAP1-201ENST00000350498 RRP1BQ14684 758 aaKnown RBP18.44■□□□□ 0.54
PDAP1-201ENST00000350498 USH1GQ495M9 461 aa18.44■□□□□ 0.54
PDAP1-201ENST00000350498 CNNM4Q6P4Q7 775 aa18.44■□□□□ 0.54
PDAP1-201ENST00000350498 POTEBQ6S5H4 581 aa18.44■□□□□ 0.54
PDAP1-201ENST00000350498 UNC13DQ70J99 1090 aa18.44■□□□□ 0.54
PDAP1-201ENST00000350498 KIAA1328Q86T90 577 aa18.44■□□□□ 0.54
PDAP1-201ENST00000350498 NELFCDQ8IXH7 590 aa18.44■□□□□ 0.54
PDAP1-201ENST00000350498 DRC1Q96MC2 740 aa18.44■□□□□ 0.54
PDAP1-201ENST00000350498 NPR1P16066 1061 aa18.43■□□□□ 0.54
PDAP1-201ENST00000350498 TNNT3P45378 269 aaPredicted RBP18.43■□□□□ 0.54
PDAP1-201ENST00000350498 AMPD3Q01432 767 aa18.43■□□□□ 0.54
PDAP1-201ENST00000350498 TMEM266Q2M3C6 531 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 177.3 ms