RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 DAGLBQ8NCG7 672 aa15.5■□□□□ 0.07
TRIM4-201ENST00000349062 CNOT6LQ96LI5 555 aaKnown RBP15.5■□□□□ 0.07
TRIM4-201ENST00000349062 HINFPQ9BQA5 517 aa15.5■□□□□ 0.07
TRIM4-201ENST00000349062 TUBGCP2Q9BSJ2 902 aa15.5■□□□□ 0.07
TRIM4-201ENST00000349062 DHX36Q9H2U1 1008 aaKnown RBP15.5■□□□□ 0.07
TRIM4-201ENST00000349062 BCAS3Q9H6U6 928 aa15.5■□□□□ 0.07
TRIM4-201ENST00000349062 KLRC4O43908 158 aa15.5■□□□□ 0.07
TRIM4-201ENST00000349062 IRX5P78411 483 aaPredicted RBP15.5■□□□□ 0.07
TRIM4-201ENST00000349062 HERC4Q5GLZ8 1057 aaPredicted RBP15.5■□□□□ 0.07
TRIM4-201ENST00000349062 DRC1Q96MC2 740 aa15.5■□□□□ 0.07
TRIM4-201ENST00000349062 PNMA5Q96PV4 448 aa15.5■□□□□ 0.07
TRIM4-201ENST00000349062 PYM1Q9BRP8 204 aaKnown RBP15.5■□□□□ 0.07
TRIM4-201ENST00000349062 CCSER1Q9C0I3 900 aa15.5■□□□□ 0.07
TRIM4-201ENST00000349062 RIC8AQ9NPQ8 531 aa15.5■□□□□ 0.07
TRIM4-201ENST00000349062 KBTBD4Q9NVX7 518 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 SUGT1Q9Y2Z0 365 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 CCDC175P0C221 793 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 TNNT3P45378 269 aaPredicted RBP15.49■□□□□ 0.07
TRIM4-201ENST00000349062 SYDE2Q5VT97 1194 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 CDKAL1Q5VV42 579 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 TMCO3Q6UWJ1 677 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 TMEM179Q6ZVK1 233 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 REXO1L1PQ8IX06 675 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 AGPAT5Q9NUQ2 364 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 DDX60LQ5H9U9 1706 aaKnown RBP15.49■□□□□ 0.07
TRIM4-201ENST00000349062 TTC26A0AVF1 554 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 TRAF5O00463 557 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 CLCN6P51797 869 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 SKIDA1Q1XH10 827 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 KIAA1755Q5JYT7 1200 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 APTXQ7Z2E3 356 aaKnown RBP15.49■□□□□ 0.07
TRIM4-201ENST00000349062 GPBP1Q86WP2 473 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 PIGOQ8TEQ8 1089 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 P2RX5Q93086 422 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 P2RX7Q99572 595 aaKnown RBP15.49■□□□□ 0.07
TRIM4-201ENST00000349062 AMNQ9BXJ7 453 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 ZNF446Q9NWS9 450 aa15.49■□□□□ 0.07
TRIM4-201ENST00000349062 SLX4Q8IY92 1834 aa15.48■□□□□ 0.07
TRIM4-201ENST00000349062 EGFRP00533 1210 aa15.48■□□□□ 0.07
TRIM4-201ENST00000349062 CYP27A1Q02318 531 aa15.48■□□□□ 0.07
TRIM4-201ENST00000349062 KIF4BQ2VIQ3 1234 aa15.48■□□□□ 0.07
TRIM4-201ENST00000349062 STYK1Q6J9G0 422 aa15.48■□□□□ 0.07
TRIM4-201ENST00000349062 IRF2BP1Q8IU81 584 aa15.48■□□□□ 0.07
TRIM4-201ENST00000349062 NIM1KQ8IY84 436 aa15.48■□□□□ 0.07
TRIM4-201ENST00000349062 SMCR8Q8TEV9 937 aaPredicted RBP15.48■□□□□ 0.07
TRIM4-201ENST00000349062 HAS1Q92839 578 aa15.48■□□□□ 0.07
TRIM4-201ENST00000349062 FGFBP2Q9BYJ0 223 aa15.48■□□□□ 0.07
TRIM4-201ENST00000349062 BLOC1S4Q9NUP1 217 aa15.48■□□□□ 0.07
TRIM4-201ENST00000349062 RGL1Q9NZL6 768 aa15.48■□□□□ 0.07
TRIM4-201ENST00000349062 HDAC9Q9UKV0 1011 aa15.48■□□□□ 0.07
TRIM4-201ENST00000349062 EDIL3O43854 480 aa15.48■□□□□ 0.07
TRIM4-201ENST00000349062 MFAP3LO75121 409 aa15.48■□□□□ 0.07
TRIM4-201ENST00000349062 GYS2P54840 703 aa15.48■□□□□ 0.07
TRIM4-201ENST00000349062 TMEM139Q8IV31 216 aa15.48■□□□□ 0.07
TRIM4-201ENST00000349062 KIAA0895Q8NCT3 520 aa15.48■□□□□ 0.07
TRIM4-201ENST00000349062 ZNF70Q9UC06 446 aaPredicted RBP15.48■□□□□ 0.07
TRIM4-201ENST00000349062 LUC7L2Q9Y383 392 aaKnown RBP15.48■□□□□ 0.07
TRIM4-201ENST00000349062 IGKV6D-41A0A0C4DH26 115 aa15.47■□□□□ 0.07
TRIM4-201ENST00000349062 ENC1O14682 589 aa15.47■□□□□ 0.07
TRIM4-201ENST00000349062 FANCGO15287 622 aa15.47■□□□□ 0.07
TRIM4-201ENST00000349062 PSMC6P62333 389 aa15.47■□□□□ 0.07
TRIM4-201ENST00000349062 ARHGAP4P98171 946 aa15.47■□□□□ 0.07
TRIM4-201ENST00000349062 CCDC93Q567U6 631 aa15.47■□□□□ 0.07
TRIM4-201ENST00000349062 NLRC4Q9NPP4 1024 aa15.47■□□□□ 0.07
TRIM4-201ENST00000349062 PSDA5PKW4 1024 aaPredicted RBP15.47■□□□□ 0.07
TRIM4-201ENST00000349062 ZBTB39O15060 712 aa15.47■□□□□ 0.07
TRIM4-201ENST00000349062 STX10O60499 249 aa15.47■□□□□ 0.07
TRIM4-201ENST00000349062 HNRNPH2P55795 449 aaKnown RBP15.47■□□□□ 0.07
TRIM4-201ENST00000349062 APBA1Q02410 837 aa15.47■□□□□ 0.07
TRIM4-201ENST00000349062 CCDC40Q4G0X9 1142 aa15.47■□□□□ 0.07
TRIM4-201ENST00000349062 PRR12Q9ULL5 1215 aa15.47■□□□□ 0.07
TRIM4-201ENST00000349062 SMCHD1A6NHR9 2005 aa15.47■□□□□ 0.07
TRIM4-201ENST00000349062 H7C1D1 291 aa15.47■□□□□ 0.07
TRIM4-201ENST00000349062 LAD1O00515 517 aa15.47■□□□□ 0.07
TRIM4-201ENST00000349062 TBX2Q13207 712 aaPredicted RBP15.47■□□□□ 0.07
TRIM4-201ENST00000349062 SAMD7Q7Z3H4 446 aa15.47■□□□□ 0.07
TRIM4-201ENST00000349062 TPH2Q8IWU9 490 aa15.47■□□□□ 0.07
TRIM4-201ENST00000349062 SERPINA10Q9UK55 444 aa15.47■□□□□ 0.07
TRIM4-201ENST00000349062 ASTN2O75129 1339 aaPredicted RBP15.46■□□□□ 0.07
TRIM4-201ENST00000349062 SP4Q02446 784 aa15.46■□□□□ 0.07
TRIM4-201ENST00000349062 CTTNQ14247 550 aaKnown RBP15.46■□□□□ 0.07
TRIM4-201ENST00000349062 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.46■□□□□ 0.077e-11■■■■■ 260.8
TRIM4-201ENST00000349062 PANK4Q9NVE7 773 aa15.46■□□□□ 0.07
TRIM4-201ENST00000349062 CALCOCO1Q9P1Z2 691 aa15.46■□□□□ 0.07
TRIM4-201ENST00000349062 LAMB1P07942 1786 aa15.46■□□□□ 0.07
TRIM4-201ENST00000349062 SNHG28P0DPA3 235 aa15.46■□□□□ 0.07
TRIM4-201ENST00000349062 ERVK-24P63145 666 aa15.46■□□□□ 0.07
TRIM4-201ENST00000349062 SPAG1Q07617 926 aa15.46■□□□□ 0.07
TRIM4-201ENST00000349062 CNNM4Q6P4Q7 775 aa15.46■□□□□ 0.07
TRIM4-201ENST00000349062 RSBN1LQ6PCB5 846 aaPredicted RBP15.46■□□□□ 0.07
TRIM4-201ENST00000349062 ANKRD13CQ8N6S4 541 aa15.46■□□□□ 0.07
TRIM4-201ENST00000349062 GIMAP8Q8ND71 665 aaPredicted RBP15.46■□□□□ 0.07
TRIM4-201ENST00000349062 JDP2Q8WYK2 163 aa15.46■□□□□ 0.07
TRIM4-201ENST00000349062 AK8Q96MA6 479 aa15.46■□□□□ 0.07
TRIM4-201ENST00000349062 MTMR9Q96QG7 549 aa15.46■□□□□ 0.07
TRIM4-201ENST00000349062 SEMA6BQ9H3T3 888 aa15.46■□□□□ 0.07
TRIM4-201ENST00000349062 ARGLU1Q9NWB6 273 aaPredicted RBP15.46■□□□□ 0.07
TRIM4-201ENST00000349062 PRPHP41219 470 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 KIAA1328Q86T90 577 aa15.45■□□□□ 0.06
TRIM4-201ENST00000349062 CNGA4Q8IV77 575 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms