RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 EXT2Q93063 718 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 GPR101Q96P66 508 aaPredicted RBP12.81□□□□□ -0.36
TRAF3-201ENST00000347662 PCCAP05165 728 aaPredicted RBP12.81□□□□□ -0.36
TRAF3-201ENST00000347662 ANO4Q32M45 955 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 FAM173BQ6P4H8 233 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 METTL23Q86XA0 190 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 U2AF1L4Q8WU68 220 aaKnown RBP12.81□□□□□ -0.36
TRAF3-201ENST00000347662 DNAJC7Q99615 494 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 EPAS1Q99814 870 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 ZBED2Q9BTP6 218 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 PPP1R2P41236 205 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 PIK3CAP42336 1068 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 ART3Q13508 389 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 THOC5Q13769 683 aaKnown RBP12.81□□□□□ -0.36
TRAF3-201ENST00000347662 TJAP1Q5JTD0 557 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 PLXNC1O60486 1568 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 TTC37Q6PGP7 1564 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 TYW1BQ6NUM6 668 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 BRAPQ7Z569 592 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 GRK7Q8WTQ7 553 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 ADGRL2O95490 1459 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 DLATP10515 647 aaKnown RBP12.8□□□□□ -0.36
TRAF3-201ENST00000347662 PMLP29590 882 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 PPARAQ07869 468 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 TRIM14Q14142 442 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 DIS3L2Q8IYB7 885 aaKnown RBP12.8□□□□□ -0.36
TRAF3-201ENST00000347662 NCLNQ969V3 563 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 GDAP1L1Q96MZ0 367 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 USP26Q9BXU7 913 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 CLCA2Q9UQC9 943 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 PTPN22Q9Y2R2 807 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 KDM5DQ9BY66 1539 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 MAN1A2O60476 641 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 DDAH1O94760 285 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 YWHAGP61981 247 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRAF3-201ENST00000347662 RNF207Q6ZRF8 634 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 LRRC8CQ8TDW0 803 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 SUPT3HB4E1H0 165 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 INHBAP08476 426 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 CTNNA1P35221 906 aaKnown RBP12.8□□□□□ -0.36
TRAF3-201ENST00000347662 NSUN2Q08J23 767 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRAF3-201ENST00000347662 DPP9Q86TI2 863 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 DNAAF3Q8N9W5 541 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.8□□□□□ -0.36
TRAF3-201ENST00000347662 XDHP47989 1333 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 RFX6Q8HWS3 928 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 CCNYQ8ND76 341 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 PRDM5Q9NQX1 630 aaPredicted RBP12.8□□□□□ -0.36
TRAF3-201ENST00000347662 KDRP35968 1356 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 TUBB4AP04350 444 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 ICA1Q05084 483 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 MIGA2Q7L4E1 593 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 BBOF1Q8ND07 529 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 DNAJC5Q9H3Z4 198 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 ERBB3P21860 1342 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 KRT87PA6NCN2 255 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 SYCE1LA8MT33 242 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 SEC24BO95487 1268 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 HSPA8P11142 646 aaKnown RBP12.8□□□□□ -0.36
TRAF3-201ENST00000347662 EN1Q05925 392 aaPredicted RBP12.8□□□□□ -0.36
TRAF3-201ENST00000347662 TMTC3Q6ZXV5 915 aa12.8□□□□□ -0.36
TRAF3-201ENST00000347662 G3BP2Q9UN86 482 aaKnown RBP12.8□□□□□ -0.36
TRAF3-201ENST00000347662 BRD1O95696 1058 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 PAK1Q13153 545 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 MAGI3Q5TCQ9 1506 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 FRA10AC1Q70Z53 315 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 NUP58Q9BVL2 599 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 LSM14BQ9BX40 385 aaKnown RBP12.79□□□□□ -0.36
TRAF3-201ENST00000347662 ARHGAP6O43182 974 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 SKIP12755 728 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 UBE3AQ05086 875 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 KIF19Q2TAC6 998 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 RNF219Q5W0B1 726 aaPredicted RBP12.79□□□□□ -0.36
TRAF3-201ENST00000347662 AKT3Q9Y243 479 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 RPSAP08865 295 aaKnown RBP12.79□□□□□ -0.36
TRAF3-201ENST00000347662 REXO1Q8N1G1 1221 aaKnown RBP12.79□□□□□ -0.36
TRAF3-201ENST00000347662 CFAP36Q96G28 342 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 IFIH1Q9BYX4 1025 aaKnown RBP12.79□□□□□ -0.36
TRAF3-201ENST00000347662 TXLNGQ9NUQ3 528 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 KIF17Q9P2E2 1029 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 DDX42Q86XP3 938 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRAF3-201ENST00000347662 SH3BGRP55822 239 aaPredicted RBP12.79□□□□□ -0.36
TRAF3-201ENST00000347662 BFSP1Q12934 665 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 TRIM67Q6ZTA4 783 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 FASTKD5Q7L8L6 764 aaKnown RBP12.79□□□□□ -0.36
TRAF3-201ENST00000347662 STAMQ92783 540 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 ARPP21Q9UBL0 812 aaPredicted RBP12.79□□□□□ -0.36
TRAF3-201ENST00000347662 HECW2Q9P2P5 1572 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 ORC4O43929 436 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 ELF1P32519 619 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 PDXDC1Q6P996 788 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 EAF2Q96CJ1 260 aaPredicted RBP12.79□□□□□ -0.36
TRAF3-201ENST00000347662 SLC38A10Q9HBR0 1119 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 CAPN7Q9Y6W3 813 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 SAMD9LQ8IVG5 1584 aa12.79□□□□□ -0.36
TRAF3-201ENST00000347662 PDE8BO95263 885 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 ACTN1P12814 892 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 TMOD1P28289 359 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 ABCB5Q2M3G0 1257 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 NEMP1O14524 444 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms