RNA–Protein interactions for RNA: ENST00000346329.7

CTTN-202, Transcript of cortactin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-202ENST00000346329 PDXDC2PQ6P474 469 aa16.75■□□□□ 0.27
CTTN-202ENST00000346329 RBM43Q6ZSC3 357 aaKnown RBP16.75■□□□□ 0.27
CTTN-202ENST00000346329 EHD4Q9H223 541 aa16.75■□□□□ 0.27
CTTN-202ENST00000346329 EXOC1Q9NV70 894 aa16.75■□□□□ 0.27
CTTN-202ENST00000346329 HERC5Q9UII4 1024 aaKnown RBP16.75■□□□□ 0.27
CTTN-202ENST00000346329 N4BP3O15049 544 aa16.74■□□□□ 0.27
CTTN-202ENST00000346329 HDLBPQ00341 1268 aaKnown RBP16.74■□□□□ 0.27
CTTN-202ENST00000346329 PTPROQ16827 1216 aa16.74■□□□□ 0.27
CTTN-202ENST00000346329 PPP1R18Q6NYC8 613 aa16.74■□□□□ 0.27
CTTN-202ENST00000346329 PHF20L1A8MW92 1017 aa16.74■□□□□ 0.27
CTTN-202ENST00000346329 BAATQ14032 418 aaPredicted RBP16.74■□□□□ 0.27
CTTN-202ENST00000346329 HERC4Q5GLZ8 1057 aaPredicted RBP16.74■□□□□ 0.27
CTTN-202ENST00000346329 DDX12PQ92771 950 aa16.74■□□□□ 0.27
CTTN-202ENST00000346329 DCPSQ96C86 337 aaKnown RBP16.74■□□□□ 0.27
CTTN-202ENST00000346329 ZBTB10Q96DT7 871 aa16.74■□□□□ 0.27
CTTN-202ENST00000346329 TCEAL9Q9UHQ7 104 aa16.74■□□□□ 0.27
CTTN-202ENST00000346329 CD2APQ9Y5K6 639 aa16.74■□□□□ 0.27
CTTN-202ENST00000346329 TPM4P67936 248 aa16.74■□□□□ 0.27
CTTN-202ENST00000346329 CNTN2Q02246 1040 aa16.74■□□□□ 0.27
CTTN-202ENST00000346329 GPBP1Q86WP2 473 aa16.74■□□□□ 0.27
CTTN-202ENST00000346329 PNMA5Q96PV4 448 aa16.74■□□□□ 0.27
CTTN-202ENST00000346329 WDR18Q9BV38 432 aa16.74■□□□□ 0.27
CTTN-202ENST00000346329 ZNF831Q5JPB2 1677 aa16.73■□□□□ 0.27
CTTN-202ENST00000346329 MYO3BQ8WXR4 1341 aa16.73■□□□□ 0.27
CTTN-202ENST00000346329 GCOM1H8Y6P7 765 aaPredicted RBP16.73■□□□□ 0.27
CTTN-202ENST00000346329 CLIC2O15247 247 aa16.73■□□□□ 0.27
CTTN-202ENST00000346329 POLR2MP0CAP2 368 aa16.73■□□□□ 0.27
CTTN-202ENST00000346329 RCAN1P53805 252 aa16.73■□□□□ 0.27
CTTN-202ENST00000346329 RPS6P62753 249 aaKnown RBP16.73■□□□□ 0.27
CTTN-202ENST00000346329 VGLL4Q14135 290 aa16.73■□□□□ 0.27
CTTN-202ENST00000346329 NCAPG2Q86XI2 1143 aa16.73■□□□□ 0.27
CTTN-202ENST00000346329 CDK5RAP2Q96SN8 1893 aa16.73■□□□□ 0.27
CTTN-202ENST00000346329 TIAM2Q8IVF5 1701 aa16.73■□□□□ 0.27
CTTN-202ENST00000346329 NRXN2Q9P2S2 1712 aa16.73■□□□□ 0.27
CTTN-202ENST00000346329 IRF6O14896 467 aa16.73■□□□□ 0.27
CTTN-202ENST00000346329 MSH4O15457 936 aa16.73■□□□□ 0.27
CTTN-202ENST00000346329 NOLC1Q14978 699 aaKnown RBP eCLIP16.73■□□□□ 0.273e-7■□□□□ 8.1
CTTN-202ENST00000346329 PAXIP1Q6ZW49 1069 aaPredicted RBP16.73■□□□□ 0.27
CTTN-202ENST00000346329 INTS13Q9NVM9 706 aa16.73■□□□□ 0.27
CTTN-202ENST00000346329 CYP2C8P10632 490 aa16.72■□□□□ 0.27
CTTN-202ENST00000346329 DNA2P51530 1060 aa16.72■□□□□ 0.27
CTTN-202ENST00000346329 TNFAIP1Q13829 316 aa16.72■□□□□ 0.27
CTTN-202ENST00000346329 E2F4Q16254 413 aa16.72■□□□□ 0.27
CTTN-202ENST00000346329 DCAF4Q8WV16 495 aa16.72■□□□□ 0.27
CTTN-202ENST00000346329 FZD9O00144 591 aa16.72■□□□□ 0.27
CTTN-202ENST00000346329 HMGB2P26583 209 aaKnown RBP16.72■□□□□ 0.27
CTTN-202ENST00000346329 SEPT14Q6ZU15 432 aa16.72■□□□□ 0.27
CTTN-202ENST00000346329 DYDC2Q96IM9 177 aa16.72■□□□□ 0.27
CTTN-202ENST00000346329 TRERF1Q96PN7 1200 aa16.72■□□□□ 0.27
CTTN-202ENST00000346329 TUBE1Q9UJT0 475 aa16.72■□□□□ 0.27
CTTN-202ENST00000346329 PDE4DIPQ5VU43 2346 aa16.71■□□□□ 0.27
CTTN-202ENST00000346329 MORC3Q14149 939 aa16.71■□□□□ 0.27
CTTN-202ENST00000346329 LRCH2Q5VUJ6 765 aa16.71■□□□□ 0.27
CTTN-202ENST00000346329 ARMCX5Q6P1M9 558 aa16.71■□□□□ 0.27
CTTN-202ENST00000346329 SV2BQ7L1I2 683 aa16.71■□□□□ 0.27
CTTN-202ENST00000346329 IRX2Q9BZI1 471 aaPredicted RBP16.71■□□□□ 0.27
CTTN-202ENST00000346329 TISP43B9A030 160 aa16.71■□□□□ 0.27
CTTN-202ENST00000346329 GAS7O60861 476 aa16.71■□□□□ 0.27
CTTN-202ENST00000346329 ATP9AO75110 1047 aa16.71■□□□□ 0.27
CTTN-202ENST00000346329 PRPF6O94906 941 aaKnown RBP16.71■□□□□ 0.27
CTTN-202ENST00000346329 PTPRAP18433 802 aa16.71■□□□□ 0.27
CTTN-202ENST00000346329 TMEM63BQ5T3F8 832 aa16.71■□□□□ 0.27
CTTN-202ENST00000346329 GJC2Q5T442 439 aaPredicted RBP16.71■□□□□ 0.27
CTTN-202ENST00000346329 TMED8Q6PL24 325 aaPredicted RBP16.71■□□□□ 0.27
CTTN-202ENST00000346329 LARP4BQ92615 738 aaKnown RBP16.71■□□□□ 0.27
CTTN-202ENST00000346329 HINFPQ9BQA5 517 aa16.71■□□□□ 0.27
CTTN-202ENST00000346329 SLF1Q9BQI6 1058 aa16.71■□□□□ 0.27
CTTN-202ENST00000346329 KIFC3Q9BVG8 833 aa16.71■□□□□ 0.27
CTTN-202ENST00000346329 ZSWIM4Q9H7M6 989 aa16.71■□□□□ 0.27
CTTN-202ENST00000346329 B4DLN1 442 aa16.71■□□□□ 0.26
CTTN-202ENST00000346329 PPP1R3GB7ZBB8 358 aa16.71■□□□□ 0.26
CTTN-202ENST00000346329 RNF225M0QZC1 329 aaPredicted RBP16.71■□□□□ 0.26
CTTN-202ENST00000346329 LONP1P36776 959 aaKnown RBP16.71■□□□□ 0.26
CTTN-202ENST00000346329 UVSSAQ2YD98 709 aa16.71■□□□□ 0.26
CTTN-202ENST00000346329 ZC2HC1CQ53FD0 456 aaPredicted RBP16.71■□□□□ 0.26
CTTN-202ENST00000346329 PLA2G4FQ68DD2 849 aa16.71■□□□□ 0.26
CTTN-202ENST00000346329 CHURC1Q8WUH1 139 aa16.71■□□□□ 0.26
CTTN-202ENST00000346329 BLOC1S4Q9NUP1 217 aa16.71■□□□□ 0.26
CTTN-202ENST00000346329 GOLGA6L6A8MZA4 724 aa16.7■□□□□ 0.26
CTTN-202ENST00000346329 CATSPER3Q86XQ3 398 aa16.7■□□□□ 0.26
CTTN-202ENST00000346329 SMCR8Q8TEV9 937 aaPredicted RBP16.7■□□□□ 0.26
CTTN-202ENST00000346329 RMDN3Q96TC7 470 aa16.7■□□□□ 0.26
CTTN-202ENST00000346329 ZNF577Q9BSK1 485 aa16.7■□□□□ 0.26
CTTN-202ENST00000346329 GPRC5CQ9NQ84 441 aa16.7■□□□□ 0.26
CTTN-202ENST00000346329 SH3GLB2Q9NR46 395 aa16.7■□□□□ 0.26
CTTN-202ENST00000346329 RNF146Q9NTX7 359 aa16.7■□□□□ 0.26
CTTN-202ENST00000346329 MTIF2P46199 727 aaKnown RBP16.7■□□□□ 0.26
CTTN-202ENST00000346329 CASP5P51878 434 aa16.7■□□□□ 0.26
CTTN-202ENST00000346329 NPEPPSP55786 919 aa16.7■□□□□ 0.26
CTTN-202ENST00000346329 CSGALNACT2Q8N6G5 542 aa16.7■□□□□ 0.26
CTTN-202ENST00000346329 TFRCP02786 760 aaKnown RBP16.69■□□□□ 0.26
CTTN-202ENST00000346329 SFPQP23246 707 aaKnown RBP eCLIP16.69■□□□□ 0.266e-6■■□□□ 14.5
CTTN-202ENST00000346329 UBXN1Q04323 297 aa16.69■□□□□ 0.26
CTTN-202ENST00000346329 TCERG1LQ5VWI1 586 aa16.69■□□□□ 0.26
CTTN-202ENST00000346329 ANKRD40Q6AI12 368 aa16.69■□□□□ 0.26
CTTN-202ENST00000346329 TRIM9Q9C026 710 aa16.69■□□□□ 0.26
CTTN-202ENST00000346329 FAM207AQ9NSI2 230 aaPredicted RBP16.69■□□□□ 0.26
CTTN-202ENST00000346329 WRAP73Q9P2S5 460 aaPredicted RBP16.69■□□□□ 0.26
CTTN-202ENST00000346329 MYH4Q9Y623 1939 aa16.69■□□□□ 0.26
CTTN-202ENST00000346329 SMTNL1A8MU46 457 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms