RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 WDR11Q9BZH6 1224 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 FAM217BQ9NTX9 383 aaPredicted RBP15.85■□□□□ 0.13
TPM4-202ENST00000344824 RBM28Q9NW13 759 aaKnown RBP15.85■□□□□ 0.13
TPM4-202ENST00000344824 CNTNAP5Q8WYK1 1306 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 NID2Q14112 1375 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 MOXD2PA6NHM9 499 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 CTDNEP1O95476 244 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 ASGR1P07306 291 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 EDNRBP24530 442 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 HSD17B4P51659 736 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 ACLYP53396 1101 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 GJA9P57773 515 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 CPLX2Q6PUV4 134 aaKnown RBP15.85■□□□□ 0.13
TPM4-202ENST00000344824 HEATR3Q7Z4Q2 680 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 PCSK9Q8NBP7 692 aaKnown RBP15.85■□□□□ 0.13
TPM4-202ENST00000344824 NSUN7Q8NE18 718 aaKnown RBP15.85■□□□□ 0.13
TPM4-202ENST00000344824 OR6J1Q8NGC5 347 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 SMARCC2Q8TAQ2 1214 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 GPKOWQ92917 476 aaPredicted RBP eCLIP15.85■□□□□ 0.131e-6■■□□□ 12.4
TPM4-202ENST00000344824 CUL5Q93034 780 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 INTS4Q96HW7 963 aaKnown RBP15.85■□□□□ 0.13
TPM4-202ENST00000344824 UPF3AQ9H1J1 476 aaKnown RBP15.85■□□□□ 0.13
TPM4-202ENST00000344824 PXMP2Q9NR77 195 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 PRKAG2Q9UGJ0 569 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 CCDC196A0A1B0GTZ2 297 aa15.84■□□□□ 0.13
TPM4-202ENST00000344824 PQBP1O60828 265 aaKnown RBP15.84■□□□□ 0.13
TPM4-202ENST00000344824 GJB2P29033 226 aa15.84■□□□□ 0.13
TPM4-202ENST00000344824 FOSBP53539 338 aa15.84■□□□□ 0.13
TPM4-202ENST00000344824 RCAN1P53805 252 aa15.84■□□□□ 0.13
TPM4-202ENST00000344824 FSCN1Q16658 493 aaKnown RBP15.84■□□□□ 0.13
TPM4-202ENST00000344824 DUSP28Q4G0W2 176 aa15.84■□□□□ 0.13
TPM4-202ENST00000344824 IQSEC1Q6DN90 963 aa15.84■□□□□ 0.13
TPM4-202ENST00000344824 KLHDC9Q8NEP7 349 aa15.84■□□□□ 0.13
TPM4-202ENST00000344824 SCFD2Q8WU76 684 aa15.84■□□□□ 0.13
TPM4-202ENST00000344824 PHKBQ93100 1093 aa15.84■□□□□ 0.13
TPM4-202ENST00000344824 GLT1D1Q96MS3 346 aa15.84■□□□□ 0.13
TPM4-202ENST00000344824 TSEN34Q9BSV6 310 aaKnown RBP15.84■□□□□ 0.13
TPM4-202ENST00000344824 COLQQ9Y215 455 aaPredicted RBP15.84■□□□□ 0.13
TPM4-202ENST00000344824 GNEQ9Y223 722 aaKnown RBP15.84■□□□□ 0.13
TPM4-202ENST00000344824 NR3C2P08235 984 aa15.83■□□□□ 0.12
TPM4-202ENST00000344824 TXNP10599 105 aaKnown RBP15.83■□□□□ 0.12
TPM4-202ENST00000344824 CST5P28325 142 aaPredicted RBP15.83■□□□□ 0.12
TPM4-202ENST00000344824 SMARCA1P28370 1054 aa15.83■□□□□ 0.12
TPM4-202ENST00000344824 TTLL4Q14679 1199 aa15.83■□□□□ 0.12
TPM4-202ENST00000344824 STXBP2Q15833 593 aa15.83■□□□□ 0.12
TPM4-202ENST00000344824 COPS5Q92905 334 aa15.83■□□□□ 0.12
TPM4-202ENST00000344824 ZFP91Q96JP5 570 aaPredicted RBP15.83■□□□□ 0.12
TPM4-202ENST00000344824 SLC26A6Q9BXS9 759 aa15.83■□□□□ 0.12
TPM4-202ENST00000344824 MAF1Q9H063 256 aa15.83■□□□□ 0.12
TPM4-202ENST00000344824 ZEB2O60315 1214 aa15.82■□□□□ 0.12
TPM4-202ENST00000344824 CDKL5O76039 1030 aa15.82■□□□□ 0.12
TPM4-202ENST00000344824 USP17L6PQ6QN14 398 aa15.82■□□□□ 0.12
TPM4-202ENST00000344824 CXCL17Q6UXB2 119 aa15.82■□□□□ 0.12
TPM4-202ENST00000344824 IL31RAQ8NI17 732 aa15.82■□□□□ 0.12
TPM4-202ENST00000344824 IWS1Q96ST2 819 aa15.82■□□□□ 0.12
TPM4-202ENST00000344824 PDCD2LQ9BRP1 358 aa15.82■□□□□ 0.12
TPM4-202ENST00000344824 LLPHQ9BRT6 129 aaKnown RBP15.82■□□□□ 0.12
TPM4-202ENST00000344824 SORBS3O60504 671 aa15.81■□□□□ 0.12
TPM4-202ENST00000344824 ARIH2O95376 493 aa15.81■□□□□ 0.12
TPM4-202ENST00000344824 MYL3P08590 195 aa15.81■□□□□ 0.12
TPM4-202ENST00000344824 CCND2P30279 289 aa15.81■□□□□ 0.12
TPM4-202ENST00000344824 NAPAP54920 295 aa15.81■□□□□ 0.12
TPM4-202ENST00000344824 MDM2Q00987 491 aaPredicted RBP15.81■□□□□ 0.12
TPM4-202ENST00000344824 SSRP1Q08945 709 aaKnown RBP15.81■□□□□ 0.12
TPM4-202ENST00000344824 PGM5Q15124 567 aa15.81■□□□□ 0.12
TPM4-202ENST00000344824 UBE2SQ16763 222 aa15.81■□□□□ 0.12
TPM4-202ENST00000344824 CCSAPQ6IQ19 270 aaPredicted RBP15.81■□□□□ 0.12
TPM4-202ENST00000344824 FAM184AQ8NB25 1140 aa15.81■□□□□ 0.12
TPM4-202ENST00000344824 MAP3K20Q9NYL2 800 aaKnown RBP15.81■□□□□ 0.12
TPM4-202ENST00000344824 ORC3Q9UBD5 711 aaPredicted RBP15.81■□□□□ 0.12
TPM4-202ENST00000344824 MRVI1Q9Y6F6 885 aa15.81■□□□□ 0.12
TPM4-202ENST00000344824 A0A0U1RQG5 324 aaPredicted RBP15.8■□□□□ 0.12
TPM4-202ENST00000344824 RBM47A0AV96 593 aaKnown RBP15.8■□□□□ 0.12
TPM4-202ENST00000344824 NKRFO15226 690 aaKnown RBP eCLIP15.8■□□□□ 0.123e-8■■■□□ 18
TPM4-202ENST00000344824 CTAGE5O15320 804 aa15.8■□□□□ 0.12
TPM4-202ENST00000344824 MAGEA10P43363 369 aaPredicted RBP15.8■□□□□ 0.12
TPM4-202ENST00000344824 CPT1AP50416 773 aa15.8■□□□□ 0.12
TPM4-202ENST00000344824 CHMP4BP1P59074 171 aa15.8■□□□□ 0.12
TPM4-202ENST00000344824 GHRHRQ02643 423 aa15.8■□□□□ 0.12
TPM4-202ENST00000344824 TLE2Q04725 743 aa15.8■□□□□ 0.12
TPM4-202ENST00000344824 NTRK3Q16288 839 aa15.8■□□□□ 0.12
TPM4-202ENST00000344824 LY6KQ17RY6 165 aa15.8■□□□□ 0.12
TPM4-202ENST00000344824 BRDTQ58F21 947 aaPredicted RBP15.8■□□□□ 0.12
TPM4-202ENST00000344824 WWC2Q6AWC2 1192 aa15.8■□□□□ 0.12
TPM4-202ENST00000344824 SAMD3Q8N6K7 520 aa15.8■□□□□ 0.12
TPM4-202ENST00000344824 RBM27Q9P2N5 1060 aaKnown RBP15.8■□□□□ 0.12
TPM4-202ENST00000344824 IFNAR1P17181 557 aa15.79■□□□□ 0.12
TPM4-202ENST00000344824 HMGN5P82970 282 aaKnown RBP15.79■□□□□ 0.12
TPM4-202ENST00000344824 AKAP17AQ02040 695 aaKnown RBP15.79■□□□□ 0.12
TPM4-202ENST00000344824 SNX17Q15036 470 aa15.79■□□□□ 0.12
TPM4-202ENST00000344824 TRIM22Q8IYM9 498 aa15.79■□□□□ 0.12
TPM4-202ENST00000344824 LBHD1Q9BQE6 289 aaPredicted RBP15.79■□□□□ 0.12
TPM4-202ENST00000344824 PSTPIP2Q9H939 334 aa15.79■□□□□ 0.12
TPM4-202ENST00000344824 PDLIM7Q9NR12 457 aa15.79■□□□□ 0.12
TPM4-202ENST00000344824 Q9Y3F1 56 aa15.79■□□□□ 0.12
TPM4-202ENST00000344824 V9GY48 417 aaPredicted RBP15.79■□□□□ 0.12
TPM4-202ENST00000344824 RANBP2P49792 3224 aaKnown RBP15.79■□□□□ 0.12
TPM4-202ENST00000344824 SCN10AQ9Y5Y9 1956 aa15.79■□□□□ 0.12
TPM4-202ENST00000344824 EIF3JO75822 258 aaKnown RBP15.78■□□□□ 0.12
TPM4-202ENST00000344824 CLTBP09497 229 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms