RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 CHMP6Q96FZ7 201 aa19.63■□□□□ 0.73
SMC4-201ENST00000344722 FGFR1OP2Q9NVK5 253 aa19.63■□□□□ 0.73
SMC4-201ENST00000344722 STK17AQ9UEE5 414 aa19.63■□□□□ 0.73
SMC4-201ENST00000344722 A1BGP04217 495 aa19.63■□□□□ 0.73
SMC4-201ENST00000344722 RASSF10A6NK89 507 aa19.63■□□□□ 0.73
SMC4-201ENST00000344722 PPP1R37O75864 691 aa19.63■□□□□ 0.73
SMC4-201ENST00000344722 CHGBP05060 677 aa19.63■□□□□ 0.73
SMC4-201ENST00000344722 MRPS25P82663 173 aaKnown RBP19.63■□□□□ 0.73
SMC4-201ENST00000344722 ADCY1Q08828 1119 aa19.63■□□□□ 0.73
SMC4-201ENST00000344722 ZC3H18Q86VM9 953 aaKnown RBP19.63■□□□□ 0.73
SMC4-201ENST00000344722 PITPNM3Q9BZ71 974 aa19.63■□□□□ 0.73
SMC4-201ENST00000344722 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.63■□□□□ 0.73
SMC4-201ENST00000344722 PKD2L1Q9P0L9 805 aa19.63■□□□□ 0.73
SMC4-201ENST00000344722 CFAP74Q9C0B2 1584 aa19.63■□□□□ 0.73
SMC4-201ENST00000344722 INHBAP08476 426 aa19.63■□□□□ 0.73
SMC4-201ENST00000344722 ESRRAP11474 423 aaPredicted RBP19.63■□□□□ 0.73
SMC4-201ENST00000344722 BRD2P25440 801 aaKnown RBP19.63■□□□□ 0.73
SMC4-201ENST00000344722 ATP10AO60312 1499 aa19.62■□□□□ 0.73
SMC4-201ENST00000344722 ATF7P17544 494 aaPredicted RBP19.62■□□□□ 0.73
SMC4-201ENST00000344722 NR2F2P24468 414 aa19.62■□□□□ 0.73
SMC4-201ENST00000344722 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.62■□□□□ 0.735e-7■■■■□ 23.7
SMC4-201ENST00000344722 STMN1P16949 149 aa19.62■□□□□ 0.73
SMC4-201ENST00000344722 EIF6P56537 245 aaKnown RBP19.62■□□□□ 0.73
SMC4-201ENST00000344722 PSMD2Q13200 908 aa19.62■□□□□ 0.73
SMC4-201ENST00000344722 HNRNPLLQ8WVV9 542 aaKnown RBP19.62■□□□□ 0.73
SMC4-201ENST00000344722 PODXLO00592 558 aa19.62■□□□□ 0.73
SMC4-201ENST00000344722 BACH1O14867 736 aa19.62■□□□□ 0.73
SMC4-201ENST00000344722 PALMO75781 387 aa19.62■□□□□ 0.73
SMC4-201ENST00000344722 LIFRP42702 1097 aa19.62■□□□□ 0.73
SMC4-201ENST00000344722 TCIRG1Q13488 830 aa19.62■□□□□ 0.73
SMC4-201ENST00000344722 HADHQ16836 314 aaKnown RBP19.62■□□□□ 0.73
SMC4-201ENST00000344722 ARL6IP4Q66PJ3 421 aaKnown RBP19.62■□□□□ 0.73
SMC4-201ENST00000344722 ASXL2Q76L83 1435 aa19.62■□□□□ 0.73
SMC4-201ENST00000344722 TMEM60Q9H2L4 133 aa19.62■□□□□ 0.73
SMC4-201ENST00000344722 DDX25Q9UHL0 483 aaKnown RBP19.62■□□□□ 0.73
SMC4-201ENST00000344722 LRRC63Q05C16 580 aa19.61■□□□□ 0.73
SMC4-201ENST00000344722 MAEAQ7L5Y9 396 aa19.61■□□□□ 0.73
SMC4-201ENST00000344722 SMCR8Q8TEV9 937 aaPredicted RBP19.61■□□□□ 0.73
SMC4-201ENST00000344722 ATP7BP35670 1465 aa19.61■□□□□ 0.73
SMC4-201ENST00000344722 FAM170AA1A519 330 aa19.61■□□□□ 0.73
SMC4-201ENST00000344722 MSH2P43246 934 aa19.61■□□□□ 0.73
SMC4-201ENST00000344722 ZNF473Q8WTR7 871 aaKnown RBP19.61■□□□□ 0.73
SMC4-201ENST00000344722 HDAC6Q9UBN7 1215 aa19.61■□□□□ 0.73
SMC4-201ENST00000344722 PARP3Q9Y6F1 533 aa19.61■□□□□ 0.73
SMC4-201ENST00000344722 UNC13AQ9UPW8 1703 aa19.61■□□□□ 0.73
SMC4-201ENST00000344722 PRPF3O43395 683 aaKnown RBP19.61■□□□□ 0.73
SMC4-201ENST00000344722 SPECC1L-ADORA2AF8WAN1 911 aa19.61■□□□□ 0.73
SMC4-201ENST00000344722 MDH1P40925 334 aaKnown RBP19.61■□□□□ 0.73
SMC4-201ENST00000344722 CTSWP56202 376 aa19.61■□□□□ 0.73
SMC4-201ENST00000344722 KSR1Q8IVT5 923 aa19.61■□□□□ 0.73
SMC4-201ENST00000344722 ECT2Q9H8V3 914 aa19.61■□□□□ 0.73
SMC4-201ENST00000344722 L2HGDHQ9H9P8 463 aa19.61■□□□□ 0.73
SMC4-201ENST00000344722 GCFC2P16383 781 aaKnown RBP19.61■□□□□ 0.73
SMC4-201ENST00000344722 TPH2Q8IWU9 490 aa19.61■□□□□ 0.73
SMC4-201ENST00000344722 TAF1DQ9H5J8 278 aaPredicted RBP19.61■□□□□ 0.73
SMC4-201ENST00000344722 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.61■□□□□ 0.73
SMC4-201ENST00000344722 MYL7Q01449 175 aa19.6■□□□□ 0.73
SMC4-201ENST00000344722 TTC16Q8NEE8 873 aa19.6■□□□□ 0.73
SMC4-201ENST00000344722 HPCAL4Q9UM19 191 aa19.6■□□□□ 0.73
SMC4-201ENST00000344722 HARSP12081 509 aaKnown RBP19.6■□□□□ 0.73
SMC4-201ENST00000344722 PLA2G4AP47712 749 aa19.6■□□□□ 0.73
SMC4-201ENST00000344722 AIFM3Q96NN9 605 aa19.6■□□□□ 0.73
SMC4-201ENST00000344722 TBK1Q9UHD2 729 aa19.6■□□□□ 0.73
SMC4-201ENST00000344722 ATP1A1P05023 1023 aaKnown RBP19.6■□□□□ 0.73
SMC4-201ENST00000344722 GNPTABQ3T906 1256 aa19.6■□□□□ 0.73
SMC4-201ENST00000344722 CADPS2Q86UW7 1296 aa19.6■□□□□ 0.73
SMC4-201ENST00000344722 FAM167BQ9BTA0 163 aa19.6■□□□□ 0.73
SMC4-201ENST00000344722 KLRF2D3W0D1 207 aa19.6■□□□□ 0.73
SMC4-201ENST00000344722 GUCY1A3Q02108 690 aa19.6■□□□□ 0.73
SMC4-201ENST00000344722 SDR42E1Q8WUS8 393 aa19.6■□□□□ 0.73
SMC4-201ENST00000344722 TRIM11Q96F44 468 aa19.6■□□□□ 0.73
SMC4-201ENST00000344722 DRC3Q9H069 523 aa19.6■□□□□ 0.73
SMC4-201ENST00000344722 GOLGA8QA0A0J9YX86 632 aa19.59■□□□□ 0.73
SMC4-201ENST00000344722 GOLGA8OA6NCC3 632 aa19.59■□□□□ 0.73
SMC4-201ENST00000344722 GOLGA8NF8WBI6 632 aa19.59■□□□□ 0.73
SMC4-201ENST00000344722 H2AFXP16104 143 aaPredicted RBP19.59■□□□□ 0.73
SMC4-201ENST00000344722 SLC1A4P43007 532 aa19.59■□□□□ 0.73
SMC4-201ENST00000344722 NXNQ6DKJ4 435 aa19.59■□□□□ 0.73
SMC4-201ENST00000344722 CYP4F22Q6NT55 531 aa19.59■□□□□ 0.73
SMC4-201ENST00000344722 SASH1O94885 1247 aa19.59■□□□□ 0.73
SMC4-201ENST00000344722 PDHA1P08559 390 aa19.59■□□□□ 0.73
SMC4-201ENST00000344722 OTUD6AQ7L8S5 288 aa19.59■□□□□ 0.73
SMC4-201ENST00000344722 EXOC1LA0A1B0GW35 172 aa19.59■□□□□ 0.73
SMC4-201ENST00000344722 MYO1FO00160 1098 aa19.59■□□□□ 0.73
SMC4-201ENST00000344722 OSBP2Q969R2 916 aa19.59■□□□□ 0.73
SMC4-201ENST00000344722 EPS15L1Q9UBC2 864 aa19.59■□□□□ 0.73
SMC4-201ENST00000344722 MED14O60244 1454 aa19.59■□□□□ 0.73
SMC4-201ENST00000344722 STK36Q9NRP7 1315 aa19.59■□□□□ 0.73
SMC4-201ENST00000344722 TEX33O43247 280 aa19.59■□□□□ 0.73
SMC4-201ENST00000344722 FGGP02679 453 aa19.59■□□□□ 0.73
SMC4-201ENST00000344722 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.59■□□□□ 0.731e-8■■■■■ 268.2
SMC4-201ENST00000344722 FHOD1Q9Y613 1164 aa19.59■□□□□ 0.73
SMC4-201ENST00000344722 GIPC1O14908 333 aa19.58■□□□□ 0.73
SMC4-201ENST00000344722 ADD2P35612 726 aa19.58■□□□□ 0.73
SMC4-201ENST00000344722 DTNBP1Q96EV8 351 aa19.58■□□□□ 0.73
SMC4-201ENST00000344722 UIMC1Q96RL1 719 aa19.58■□□□□ 0.73
SMC4-201ENST00000344722 OSBPL1AQ9BXW6 950 aa19.58■□□□□ 0.73
SMC4-201ENST00000344722 SH2D4AQ9H788 454 aa19.58■□□□□ 0.73
SMC4-201ENST00000344722 IFT122Q9HBG6 1241 aa19.58■□□□□ 0.73
SMC4-201ENST00000344722 CDK12Q9NYV4 1490 aaPredicted RBP19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms