RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 RBM28Q9NW13 759 aaKnown RBP23.14■■□□□ 1.29
CEACAM3-201ENST00000344550 MYL3P08590 195 aa23.13■■□□□ 1.29
CEACAM3-201ENST00000344550 CASTP20810 708 aaKnown RBP23.13■■□□□ 1.29
CEACAM3-201ENST00000344550 PTGS1P23219 599 aa23.13■■□□□ 1.29
CEACAM3-201ENST00000344550 ARHGAP1Q07960 439 aa23.13■■□□□ 1.29
CEACAM3-201ENST00000344550 SRBD1Q8N5C6 995 aaKnown RBP23.13■■□□□ 1.29
CEACAM3-201ENST00000344550 CUL5Q93034 780 aa23.13■■□□□ 1.29
CEACAM3-201ENST00000344550 MYL10Q9BUA6 226 aa23.13■■□□□ 1.29
CEACAM3-201ENST00000344550 MRVI1Q9Y6F6 885 aa23.13■■□□□ 1.29
CEACAM3-201ENST00000344550 KIAA1217Q5T5P2 1943 aa23.13■■□□□ 1.29
CEACAM3-201ENST00000344550 HOXA13P31271 388 aaPredicted RBP23.12■■□□□ 1.29
CEACAM3-201ENST00000344550 LY6KQ17RY6 165 aa23.12■■□□□ 1.29
CEACAM3-201ENST00000344550 GNPTABQ3T906 1256 aa23.12■■□□□ 1.29
CEACAM3-201ENST00000344550 C9orf50Q5SZB4 431 aa23.12■■□□□ 1.29
CEACAM3-201ENST00000344550 PPTC7Q8NI37 304 aa23.12■■□□□ 1.29
CEACAM3-201ENST00000344550 HIPK3Q9H422 1215 aa23.12■■□□□ 1.29
CEACAM3-201ENST00000344550 SCN10AQ9Y5Y9 1956 aa23.12■■□□□ 1.29
CEACAM3-201ENST00000344550 B4GALT4O60513 344 aa23.11■■□□□ 1.29
CEACAM3-201ENST00000344550 PSMC6P62333 389 aa23.11■■□□□ 1.29
CEACAM3-201ENST00000344550 DGKDQ16760 1214 aa23.11■■□□□ 1.29
CEACAM3-201ENST00000344550 PSRC1Q6PGN9 363 aaPredicted RBP23.11■■□□□ 1.29
CEACAM3-201ENST00000344550 APOA5Q6Q788 366 aa23.11■■□□□ 1.29
CEACAM3-201ENST00000344550 TMTC3Q6ZXV5 915 aa23.11■■□□□ 1.29
CEACAM3-201ENST00000344550 SESTD1Q86VW0 696 aa23.11■■□□□ 1.29
CEACAM3-201ENST00000344550 RASEFQ8IZ41 740 aa23.11■■□□□ 1.29
CEACAM3-201ENST00000344550 FBXL16Q8N461 479 aa23.11■■□□□ 1.29
CEACAM3-201ENST00000344550 AFG1LQ8WV93 481 aa23.11■■□□□ 1.29
CEACAM3-201ENST00000344550 COPS5Q92905 334 aa23.11■■□□□ 1.29
CEACAM3-201ENST00000344550 PPFIA4O75335 1185 aa23.1■■□□□ 1.29
CEACAM3-201ENST00000344550 MMP3P08254 477 aa23.1■■□□□ 1.29
CEACAM3-201ENST00000344550 MYCLP12524 364 aaPredicted RBP23.1■■□□□ 1.29
CEACAM3-201ENST00000344550 HOXD8P13378 290 aaPredicted RBP23.1■■□□□ 1.29
CEACAM3-201ENST00000344550 HSPA4P34932 840 aa23.1■■□□□ 1.29
CEACAM3-201ENST00000344550 NBPF20Q3BBV1 942 aa23.1■■□□□ 1.29
CEACAM3-201ENST00000344550 FCHSD1Q86WN1 690 aa23.1■■□□□ 1.29
CEACAM3-201ENST00000344550 DEFB123Q8N688 67 aa23.1■■□□□ 1.29
CEACAM3-201ENST00000344550 RNPC3Q96LT9 517 aaKnown RBP23.1■■□□□ 1.29
CEACAM3-201ENST00000344550 NOC4LQ9BVI4 516 aaKnown RBP23.1■■□□□ 1.29
CEACAM3-201ENST00000344550 KATNAL1Q9BW62 490 aa23.1■■□□□ 1.29
CEACAM3-201ENST00000344550 TRPV6Q9H1D0 765 aa23.1■■□□□ 1.29
CEACAM3-201ENST00000344550 TMEM265A0A087WTH1 108 aa23.09■■□□□ 1.29
CEACAM3-201ENST00000344550 RGS20O76081 388 aa23.09■■□□□ 1.29
CEACAM3-201ENST00000344550 PLEKHA8P1O95397 391 aa23.09■■□□□ 1.29
CEACAM3-201ENST00000344550 ICAM3P32942 547 aa23.09■■□□□ 1.29
CEACAM3-201ENST00000344550 EPHB4P54760 987 aa23.09■■□□□ 1.29
CEACAM3-201ENST00000344550 COL9A3Q14050 684 aaPredicted RBP23.09■■□□□ 1.29
CEACAM3-201ENST00000344550 MICU3Q86XE3 530 aa23.09■■□□□ 1.29
CEACAM3-201ENST00000344550 DHX37Q8IY37 1157 aaKnown RBP23.09■■□□□ 1.29
CEACAM3-201ENST00000344550 SMARCC2Q8TAQ2 1214 aa23.09■■□□□ 1.29
CEACAM3-201ENST00000344550 INPP4AQ96PE3 977 aaPredicted RBP23.09■■□□□ 1.29
CEACAM3-201ENST00000344550 IL23AQ9NPF7 189 aa23.09■■□□□ 1.29
CEACAM3-201ENST00000344550 hCG_1984214I3L0E3 225 aa23.08■■□□□ 1.29
CEACAM3-201ENST00000344550 ZBTB43O43298 467 aa23.08■■□□□ 1.29
CEACAM3-201ENST00000344550 PFKMP08237 780 aa23.08■■□□□ 1.29
CEACAM3-201ENST00000344550 CELF3Q5SZQ8 465 aaKnown RBP23.08■■□□□ 1.29
CEACAM3-201ENST00000344550 MYSM1Q5VVJ2 828 aa23.08■■□□□ 1.29
CEACAM3-201ENST00000344550 RPUSD2Q8IZ73 545 aaKnown RBP23.08■■□□□ 1.29
CEACAM3-201ENST00000344550 ZNF713Q8N859 430 aaPredicted RBP23.08■■□□□ 1.29
CEACAM3-201ENST00000344550 LRRC2Q9BYS8 371 aa23.08■■□□□ 1.29
CEACAM3-201ENST00000344550 MTIF3Q9H2K0 278 aaKnown RBP23.08■■□□□ 1.29
CEACAM3-201ENST00000344550 PSTPIP2Q9H939 334 aa23.08■■□□□ 1.29
CEACAM3-201ENST00000344550 CCDC196A0A1B0GTZ2 297 aa23.07■■□□□ 1.28
CEACAM3-201ENST00000344550 PITPNM1O00562 1244 aa23.07■■□□□ 1.28
CEACAM3-201ENST00000344550 MEIS2O14770 477 aa23.07■■□□□ 1.28
CEACAM3-201ENST00000344550 CSF2RAP15509 400 aa23.07■■□□□ 1.28
CEACAM3-201ENST00000344550 ADCK5Q3MIX3 580 aa23.07■■□□□ 1.28
CEACAM3-201ENST00000344550 RASIP1Q5U651 963 aa23.07■■□□□ 1.28
CEACAM3-201ENST00000344550 PCNX4Q63HM2 1172 aa23.07■■□□□ 1.28
CEACAM3-201ENST00000344550 PPP1R12CQ9BZL4 782 aa23.07■■□□□ 1.28
CEACAM3-201ENST00000344550 MTMR10Q9NXD2 777 aa23.07■■□□□ 1.28
CEACAM3-201ENST00000344550 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.06■■□□□ 1.28
CEACAM3-201ENST00000344550 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.06■■□□□ 1.28
CEACAM3-201ENST00000344550 PSMA5P28066 241 aa23.06■■□□□ 1.28
CEACAM3-201ENST00000344550 CYP2C18P33260 490 aa23.06■■□□□ 1.28
CEACAM3-201ENST00000344550 NEDD9Q14511 834 aa23.06■■□□□ 1.28
CEACAM3-201ENST00000344550 RTN1Q16799 776 aa23.06■■□□□ 1.28
CEACAM3-201ENST00000344550 TMEM240Q5SV17 173 aa23.06■■□□□ 1.28
CEACAM3-201ENST00000344550 IL31RAQ8NI17 732 aa23.06■■□□□ 1.28
CEACAM3-201ENST00000344550 PIBF1Q8WXW3 757 aa23.06■■□□□ 1.28
CEACAM3-201ENST00000344550 SENP7Q9BQF6 1050 aa23.06■■□□□ 1.28
CEACAM3-201ENST00000344550 GLT8D2Q9H1C3 349 aa23.06■■□□□ 1.28
CEACAM3-201ENST00000344550 SPATA31C2B4DYI2 1134 aa23.05■■□□□ 1.28
CEACAM3-201ENST00000344550 FIBPO43427 364 aa23.05■■□□□ 1.28
CEACAM3-201ENST00000344550 F2P00734 622 aa23.05■■□□□ 1.28
CEACAM3-201ENST00000344550 RXRAP19793 462 aa23.05■■□□□ 1.28
CEACAM3-201ENST00000344550 RFC2P35250 354 aa23.05■■□□□ 1.28
CEACAM3-201ENST00000344550 FAM47CQ5HY64 1035 aa23.05■■□□□ 1.28
CEACAM3-201ENST00000344550 PPP1R18Q6NYC8 613 aa23.05■■□□□ 1.28
CEACAM3-201ENST00000344550 C16orf59Q7L2K0 433 aa23.05■■□□□ 1.28
CEACAM3-201ENST00000344550 GIMAP8Q8ND71 665 aaPredicted RBP23.05■■□□□ 1.28
CEACAM3-201ENST00000344550 CDHR1Q96JP9 859 aa23.05■■□□□ 1.28
CEACAM3-201ENST00000344550 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.05■■□□□ 1.28
CEACAM3-201ENST00000344550 TRMT13Q9NUP7 481 aaKnown RBP23.05■■□□□ 1.28
CEACAM3-201ENST00000344550 PPP4R2Q9NY27 417 aa23.05■■□□□ 1.28
CEACAM3-201ENST00000344550 MRPS9P82933 396 aaKnown RBP23.04■■□□□ 1.28
CEACAM3-201ENST00000344550 FGD1P98174 961 aa23.04■■□□□ 1.28
CEACAM3-201ENST00000344550 BFSP2Q13515 415 aa23.04■■□□□ 1.28
CEACAM3-201ENST00000344550 ZNF697Q5TEC3 545 aa23.04■■□□□ 1.28
CEACAM3-201ENST00000344550 USP17L6PQ6QN14 398 aa23.04■■□□□ 1.28
CEACAM3-201ENST00000344550 BLOC1S2Q6QNY1 142 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms