RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 ZKSCAN8Q15776 578 aaPredicted RBP11.93□□□□□ -0.5
RPL28-201ENST00000344063 RAD9BQ6WBX8 426 aa11.93□□□□□ -0.5
RPL28-201ENST00000344063 ENAHQ8N8S7 591 aaPredicted RBP11.93□□□□□ -0.5
RPL28-201ENST00000344063 ZNF512BQ96KM6 892 aaPredicted RBP11.93□□□□□ -0.5
RPL28-201ENST00000344063 ARHGEF10LQ9HCE6 1279 aa11.93□□□□□ -0.5
RPL28-201ENST00000344063 STIM2Q9P246 746 aa11.93□□□□□ -0.5
RPL28-201ENST00000344063 TPX2Q9ULW0 747 aaKnown RBP11.93□□□□□ -0.5
RPL28-201ENST00000344063 BZW2Q9Y6E2 419 aaKnown RBP11.93□□□□□ -0.5
RPL28-201ENST00000344063 SASH3O75995 380 aa11.93□□□□□ -0.5
RPL28-201ENST00000344063 PLCG1P19174 1290 aa11.93□□□□□ -0.5
RPL28-201ENST00000344063 SEMA3FQ13275 785 aa11.93□□□□□ -0.5
RPL28-201ENST00000344063 CUL4BQ13620 913 aa11.93□□□□□ -0.5
RPL28-201ENST00000344063 LLGL1Q15334 1064 aa11.93□□□□□ -0.5
RPL28-201ENST00000344063 TBC1D1Q86TI0 1168 aaPredicted RBP11.93□□□□□ -0.5
RPL28-201ENST00000344063 REXO1L1PQ8IX06 675 aa11.93□□□□□ -0.5
RPL28-201ENST00000344063 PPFIBP2Q8ND30 876 aa11.93□□□□□ -0.5
RPL28-201ENST00000344063 PLCB1Q9NQ66 1216 aa11.93□□□□□ -0.5
RPL28-201ENST00000344063 BSDC1Q9NW68 430 aaPredicted RBP11.93□□□□□ -0.5
RPL28-201ENST00000344063 PCDHB13Q9Y5F0 798 aa11.93□□□□□ -0.5
RPL28-201ENST00000344063 TRIM49BA6NDI0 452 aa11.93□□□□□ -0.5
RPL28-201ENST00000344063 ZNF185O15231 689 aa11.93□□□□□ -0.5
RPL28-201ENST00000344063 GCFC2P16383 781 aaKnown RBP11.93□□□□□ -0.5
RPL28-201ENST00000344063 ANTXR2P58335 489 aa11.93□□□□□ -0.5
RPL28-201ENST00000344063 PLCB3Q01970 1234 aa11.93□□□□□ -0.5
RPL28-201ENST00000344063 PFKFB3Q16875 520 aaPredicted RBP11.93□□□□□ -0.5
RPL28-201ENST00000344063 TBCKQ8TEA7 893 aa11.93□□□□□ -0.5
RPL28-201ENST00000344063 COG1Q8WTW3 980 aa11.93□□□□□ -0.5
RPL28-201ENST00000344063 FRMPD2Q68DX3 1309 aaPredicted RBP11.93□□□□□ -0.5
RPL28-201ENST00000344063 USP14P54578 494 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 GUCY1A3Q02108 690 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 CEP128Q6ZU80 1094 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 IGDCC4Q8TDY8 1250 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 SPATS2LQ9NUQ6 558 aaKnown RBP11.92□□□□□ -0.5
RPL28-201ENST00000344063 TNS3Q68CZ2 1445 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 HIP1RO75146 1068 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 CCDC38Q502W7 563 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 GPATCH4Q5T3I0 446 aaKnown RBP11.92□□□□□ -0.5
RPL28-201ENST00000344063 CCDC197Q8NCU1 140 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 U2AF1L4Q8WU68 220 aaKnown RBP11.92□□□□□ -0.5
RPL28-201ENST00000344063 STMN2Q93045 179 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 MMS19Q96T76 1030 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 HOMER2Q9NSB8 354 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 EIF4A3P38919 411 aaKnown RBP11.92□□□□□ -0.5
RPL28-201ENST00000344063 MECOMQ03112 1051 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 ERFEQ4G0M1 354 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 LRRC47Q8N1G4 583 aaKnown RBP11.92□□□□□ -0.5
RPL28-201ENST00000344063 TC2NQ8N9U0 490 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 ASIC3Q9UHC3 531 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 TFR2Q9UP52 801 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 ATP8A1Q9Y2Q0 1164 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 ANO9A1A5B4 782 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 SLCO1A2P46721 670 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 VPS41P49754 854 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 GTF2IP78347 998 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 PSMD2Q13200 908 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 PPP1R14CQ8TAE6 165 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 CHP1Q99653 195 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 MLXIPQ9HAP2 919 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 USP40Q9NVE5 1235 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 SUFUQ9UMX1 484 aa11.92□□□□□ -0.5
RPL28-201ENST00000344063 SLIT1O75093 1534 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 XDHP47989 1333 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 SNAP23O00161 211 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 NCK2O43639 380 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 CSF1RP07333 972 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 GBP1P32455 592 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 LRRC63Q05C16 580 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 SEPT2Q15019 361 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 RBM26Q5T8P6 1007 aaKnown RBP11.91□□□□□ -0.5
RPL28-201ENST00000344063 CLEC4GQ6UXB4 293 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 DPP8Q6V1X1 898 aaPredicted RBP11.91□□□□□ -0.5
RPL28-201ENST00000344063 TAOK1Q7L7X3 1001 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 SMCR8Q8TEV9 937 aaPredicted RBP11.91□□□□□ -0.5
RPL28-201ENST00000344063 NDST4Q9H3R1 872 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 PARP2Q9UGN5 583 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 COL4A3BPQ9Y5P4 624 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 TFRCP02786 760 aaKnown RBP11.91□□□□□ -0.5
RPL28-201ENST00000344063 USP17L8P0C7I0 530 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 ALDH3A1P30838 453 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 SMTNP53814 917 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 FAM98CQ17RN3 349 aaKnown RBP11.91□□□□□ -0.5
RPL28-201ENST00000344063 TSNAXIP1Q2TAA8 658 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 CCDC105Q8IYK2 499 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 EXOC7Q9UPT5 735 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 A0A0G2JLW4 131 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 A0A1B0GTH6 734 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 MYO1FO00160 1098 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 UAP1Q16222 522 aaPredicted RBP11.91□□□□□ -0.5
RPL28-201ENST00000344063 KIF11P52732 1056 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 CORO7P57737 925 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 ATP2C1P98194 919 aaPredicted RBP11.91□□□□□ -0.5
RPL28-201ENST00000344063 EXOC3L4Q17RC7 722 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 NFRKBQ6P4R8 1299 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 ELOA2Q8IYF1 753 aaPredicted RBP11.91□□□□□ -0.5
RPL28-201ENST00000344063 RNF10Q8N5U6 811 aaKnown RBP11.91□□□□□ -0.5
RPL28-201ENST00000344063 IQCGQ9H095 443 aaKnown RBP11.91□□□□□ -0.5
RPL28-201ENST00000344063 ZBTB21Q9ULJ3 1066 aa11.91□□□□□ -0.5
RPL28-201ENST00000344063 CYP19A1P11511 503 aaPredicted RBP11.9□□□□□ -0.5
RPL28-201ENST00000344063 USH1GQ495M9 461 aa11.9□□□□□ -0.5
RPL28-201ENST00000344063 LRRC31Q6UY01 552 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms