RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 PPP1R2P41236 205 aa16.58■□□□□ 0.24
VIPAS39-202ENST00000343765 CYP27A1Q02318 531 aa16.58■□□□□ 0.24
VIPAS39-202ENST00000343765 SEPT2Q15019 361 aa16.58■□□□□ 0.24
VIPAS39-202ENST00000343765 RHOXF2Q9BQY4 288 aa16.58■□□□□ 0.24
VIPAS39-202ENST00000343765 IKQ13123 557 aaPredicted RBP16.57■□□□□ 0.24
VIPAS39-202ENST00000343765 TMEM119Q4V9L6 283 aa16.57■□□□□ 0.24
VIPAS39-202ENST00000343765 SLFN13Q68D06 897 aa16.57■□□□□ 0.24
VIPAS39-202ENST00000343765 MYO3BQ8WXR4 1341 aa16.57■□□□□ 0.24
VIPAS39-202ENST00000343765 PVALEFA0A1B0GWK0 134 aa16.57■□□□□ 0.24
VIPAS39-202ENST00000343765 EPHB6O15197 1021 aa16.57■□□□□ 0.24
VIPAS39-202ENST00000343765 PLEKP08567 350 aaPredicted RBP16.57■□□□□ 0.24
VIPAS39-202ENST00000343765 STAT3P40763 770 aa16.57■□□□□ 0.24
VIPAS39-202ENST00000343765 ZBED6P86452 979 aa16.57■□□□□ 0.24
VIPAS39-202ENST00000343765 GABPB1Q06547 395 aaPredicted RBP16.57■□□□□ 0.24
VIPAS39-202ENST00000343765 CDC37Q16543 378 aaPredicted RBP16.57■□□□□ 0.24
VIPAS39-202ENST00000343765 JAKMIP2Q96AA8 810 aa16.57■□□□□ 0.24
VIPAS39-202ENST00000343765 ZDHHC15Q96MV8 337 aa16.57■□□□□ 0.24
VIPAS39-202ENST00000343765 NUP58Q9BVL2 599 aa16.57■□□□□ 0.24
VIPAS39-202ENST00000343765 MMRN2Q9H8L6 949 aa16.57■□□□□ 0.24
VIPAS39-202ENST00000343765 ARFGAP3Q9NP61 516 aa16.57■□□□□ 0.24
VIPAS39-202ENST00000343765 FAM198AQ9UFP1 575 aa16.57■□□□□ 0.24
VIPAS39-202ENST00000343765 RCCD1A6NED2 376 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 E9PMD0 336 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 TBC1D8O95759 1140 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 MEA1Q16626 185 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 USH1GQ495M9 461 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 VWA3BQ502W6 1294 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 UTP14CQ5TAP6 766 aaKnown RBP16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 SH3BP5LQ7L8J4 393 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 ANKZF1Q9H8Y5 726 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 MYO6Q9UM54 1294 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 KIAA1024Q9UPX6 916 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 NPHP3-ACAD11A0A0J9YXS1 232 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 POTEB3A0JP26 581 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 POTECB2RU33 542 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 IPO7O95373 1038 aaKnown RBP16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 APBA3O96018 575 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 CYLC1P35663 651 aaPredicted RBP16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 POTEBQ6S5H4 581 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 CCDC17Q96LX7 622 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 PNKPQ96T60 521 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 FGFBP2Q9BYJ0 223 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 TANGO6Q9C0B7 1094 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 LACRTQ9GZZ8 138 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 NDST4Q9H3R1 872 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 HAUS4Q9H6D7 363 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 MYO1AQ9UBC5 1043 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 DUSP10Q9Y6W6 482 aa16.56■□□□□ 0.24
VIPAS39-202ENST00000343765 POLR3GO15318 223 aaPredicted RBP16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 ECE2O60344 883 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 ICA1Q05084 483 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 COASYQ13057 564 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 PODNQ7Z5L7 613 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 C2CD5Q86YS7 1000 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 GUF1Q8N442 669 aaKnown RBP16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 CCDC155Q8N6L0 562 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 RNF216Q9NWF9 866 aaPredicted RBP16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 MYH4Q9Y623 1939 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 MACROD2A1Z1Q3 448 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 CTAGE15A4D2H0 777 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 SRGAP2O75044 1071 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 CTAGE8P0CG41 777 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 KRT83P78385 493 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 KRT26Q7Z3Y9 468 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 CTAGE6Q86UF2 777 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 CTAGE4Q8IX94 777 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 NELFCDQ8IXH7 590 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 RETREG2Q8NC44 543 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 MTMR8Q96EF0 704 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 ERGIC2Q96RQ1 377 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 ANO3Q9BYT9 981 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 EHD4Q9H223 541 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 ZHX3Q9H4I2 956 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 BRWD3Q6RI45 1802 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 ATP1A1P05023 1023 aaKnown RBP16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 TERF2Q15554 542 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 COBLL1Q53SF7 1204 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 PANK4Q9NVE7 773 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 PI4KBQ9UBF8 816 aa16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 ATF5Q9Y2D1 282 aaPredicted RBP16.55■□□□□ 0.24
VIPAS39-202ENST00000343765 MYH7BA7E2Y1 1941 aa16.54■□□□□ 0.24
VIPAS39-202ENST00000343765 AMPD2Q01433 879 aa16.54■□□□□ 0.24
VIPAS39-202ENST00000343765 NOA1Q8NC60 698 aaKnown RBP16.54■□□□□ 0.24
VIPAS39-202ENST00000343765 AKT1S1Q96B36 256 aa16.54■□□□□ 0.24
VIPAS39-202ENST00000343765 DNAJC19Q96DA6 116 aa16.54■□□□□ 0.24
VIPAS39-202ENST00000343765 CAPZA3Q96KX2 299 aa16.54■□□□□ 0.24
VIPAS39-202ENST00000343765 KANSL2Q9H9L4 492 aa16.54■□□□□ 0.24
VIPAS39-202ENST00000343765 GCFC2P16383 781 aaKnown RBP16.54■□□□□ 0.24
VIPAS39-202ENST00000343765 MAN2A1Q16706 1144 aa16.54■□□□□ 0.24
VIPAS39-202ENST00000343765 WHAMMP3Q1A5X7 153 aa16.54■□□□□ 0.24
VIPAS39-202ENST00000343765 DACT2Q5SW24 774 aa16.54■□□□□ 0.24
VIPAS39-202ENST00000343765 LRRC55Q6ZSA7 311 aa16.54■□□□□ 0.24
VIPAS39-202ENST00000343765 MYOCDQ8IZQ8 938 aa16.54■□□□□ 0.24
VIPAS39-202ENST00000343765 CCDC42Q96M95 316 aa16.54■□□□□ 0.24
VIPAS39-202ENST00000343765 TSG101Q99816 390 aa16.54■□□□□ 0.24
VIPAS39-202ENST00000343765 TDRD3Q9H7E2 651 aaKnown RBP16.54■□□□□ 0.24
VIPAS39-202ENST00000343765 QSER1Q2KHR3 1735 aa16.54■□□□□ 0.24
VIPAS39-202ENST00000343765 COL11A2P13942 1736 aaPredicted RBP16.53■□□□□ 0.24
VIPAS39-202ENST00000343765 CHRNA5P30532 468 aa16.53■□□□□ 0.24
VIPAS39-202ENST00000343765 AOC3Q16853 763 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms