RNA–Protein interactions for RNA: ENST00000343742.6

LRRK2-202, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5 BASIC

Gene LRRK2, Length 4,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-202ENST00000343742 ZFPM1Q8IX07 1006 aa13.79□□□□□ -0.2
LRRK2-202ENST00000343742 TRERF1Q96PN7 1200 aa13.79□□□□□ -0.2
LRRK2-202ENST00000343742 NUP58Q9BVL2 599 aa13.79□□□□□ -0.2
LRRK2-202ENST00000343742 SAMD7Q7Z3H4 446 aa13.79□□□□□ -0.2
LRRK2-202ENST00000343742 DDX4Q9NQI0 724 aaKnown RBP13.79□□□□□ -0.2
LRRK2-202ENST00000343742 RWDD2AQ9UIY3 292 aa13.79□□□□□ -0.2
LRRK2-202ENST00000343742 STX10O60499 249 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 CDC25BP30305 580 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 SFMBT2Q5VUG0 894 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 LEKR1Q6ZMV7 388 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 SPTLC3Q9NUV7 552 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 COL4A3BPQ9Y5P4 624 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 GCFC2P16383 781 aaKnown RBP13.78□□□□□ -0.2
LRRK2-202ENST00000343742 MAP9Q49MG5 647 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 TCP11X2Q5H9J9 407 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 SECISBP2LQ93073 1101 aaKnown RBP13.78□□□□□ -0.2
LRRK2-202ENST00000343742 DCPSQ96C86 337 aaKnown RBP13.78□□□□□ -0.2
LRRK2-202ENST00000343742 EMILIN3Q9NT22 766 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 RGPD2P0DJD1 1756 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 CCNE1P24864 410 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 SARM1Q6SZW1 724 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 SPZ1Q9BXG8 430 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 JMJD4Q9H9V9 463 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 PRM3Q9NNZ6 103 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 FAM205AQ6ZU69 1335 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 DLATP10515 647 aaKnown RBP13.78□□□□□ -0.2
LRRK2-202ENST00000343742 SEPT14Q6ZU15 432 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 MPHOSPH6Q99547 160 aaKnown RBP13.78□□□□□ -0.2
LRRK2-202ENST00000343742 MAP3K14Q99558 947 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 RGL1Q9NZL6 768 aa13.78□□□□□ -0.2
LRRK2-202ENST00000343742 CCDC172P0C7W6 258 aa13.77□□□□□ -0.2
LRRK2-202ENST00000343742 ECE1P42892 770 aa13.77□□□□□ -0.2
LRRK2-202ENST00000343742 DHTKD1Q96HY7 919 aaPredicted RBP13.77□□□□□ -0.2
LRRK2-202ENST00000343742 AS3MTQ9HBK9 375 aa13.77□□□□□ -0.2
LRRK2-202ENST00000343742 FBXO28Q9NVF7 368 aa13.77□□□□□ -0.2
LRRK2-202ENST00000343742 NPHP3-ACAD11A0A0J9YXS1 232 aa13.77□□□□□ -0.21
LRRK2-202ENST00000343742 GTF2F1P35269 517 aaKnown RBP eCLIP13.77□□□□□ -0.21
LRRK2-202ENST00000343742 UTP14CQ5TAP6 766 aaKnown RBP13.77□□□□□ -0.21
LRRK2-202ENST00000343742 IFT74Q96LB3 600 aa13.77□□□□□ -0.21
LRRK2-202ENST00000343742 TNFAIP3P21580 790 aa13.77□□□□□ -0.21
LRRK2-202ENST00000343742 MTF1Q14872 753 aa13.77□□□□□ -0.21
LRRK2-202ENST00000343742 DNAJC21Q5F1R6 531 aaKnown RBP13.77□□□□□ -0.21
LRRK2-202ENST00000343742 ARMCX5Q6P1M9 558 aa13.77□□□□□ -0.21
LRRK2-202ENST00000343742 HHIPL2Q6UWX4 724 aa13.77□□□□□ -0.21
LRRK2-202ENST00000343742 TOGARAM2Q6ZUX3 1019 aa13.77□□□□□ -0.21
LRRK2-202ENST00000343742 CUEDC2Q9H467 287 aa13.77□□□□□ -0.21
LRRK2-202ENST00000343742 FKBP3Q00688 224 aaKnown RBP13.76□□□□□ -0.21
LRRK2-202ENST00000343742 CKAP4Q07065 602 aaKnown RBP13.76□□□□□ -0.21
LRRK2-202ENST00000343742 SLC30A10Q6XR72 485 aa13.76□□□□□ -0.21
LRRK2-202ENST00000343742 USP37Q86T82 979 aa13.76□□□□□ -0.21
LRRK2-202ENST00000343742 BANK1Q8NDB2 785 aa13.76□□□□□ -0.21
LRRK2-202ENST00000343742 ACER1Q8TDN7 264 aa13.76□□□□□ -0.21
LRRK2-202ENST00000343742 LARSQ9P2J5 1176 aaKnown RBP13.76□□□□□ -0.21
LRRK2-202ENST00000343742 ABCB11O95342 1321 aa13.76□□□□□ -0.21
LRRK2-202ENST00000343742 SETD1AO15047 1707 aaKnown RBP13.76□□□□□ -0.21
LRRK2-202ENST00000343742 MAATS1Q7Z4T9 603 aa13.76□□□□□ -0.21
LRRK2-202ENST00000343742 SLC35F6Q8N357 371 aa13.76□□□□□ -0.21
LRRK2-202ENST00000343742 ZNF526Q8TF50 670 aaPredicted RBP13.76□□□□□ -0.21
LRRK2-202ENST00000343742 DCAF4Q8WV16 495 aa13.76□□□□□ -0.21
LRRK2-202ENST00000343742 STK17AQ9UEE5 414 aa13.76□□□□□ -0.21
LRRK2-202ENST00000343742 ZNRF3Q9ULT6 936 aa13.76□□□□□ -0.21
LRRK2-202ENST00000343742 MCF2L2Q86YR7 1114 aa13.76□□□□□ -0.21
LRRK2-202ENST00000343742 KRT222Q8N1A0 295 aa13.76□□□□□ -0.21
LRRK2-202ENST00000343742 NAA15Q9BXJ9 866 aaKnown RBP13.76□□□□□ -0.21
LRRK2-202ENST00000343742 IMPG2Q9BZV3 1241 aa13.76□□□□□ -0.21
LRRK2-202ENST00000343742 GSTTP1A0A1W2PQM5 241 aa13.76□□□□□ -0.21
LRRK2-202ENST00000343742 hCG_1984214I3L0E3 225 aa13.76□□□□□ -0.21
LRRK2-202ENST00000343742 IFFO1Q0D2I5 559 aa13.76□□□□□ -0.21
LRRK2-202ENST00000343742 ZNF713Q8N859 430 aaPredicted RBP13.76□□□□□ -0.21
LRRK2-202ENST00000343742 SYNCQ9H7C4 482 aa13.76□□□□□ -0.21
LRRK2-202ENST00000343742 MLXIPQ9HAP2 919 aa13.76□□□□□ -0.21
LRRK2-202ENST00000343742 DPY19L2Q6NUT2 758 aa13.75□□□□□ -0.21
LRRK2-202ENST00000343742 METTL13Q8N6R0 699 aa13.75□□□□□ -0.21
LRRK2-202ENST00000343742 ZNF70Q9UC06 446 aaPredicted RBP13.75□□□□□ -0.21
LRRK2-202ENST00000343742 ZHX1Q9UKY1 873 aaPredicted RBP13.75□□□□□ -0.21
LRRK2-202ENST00000343742 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.75□□□□□ -0.21
LRRK2-202ENST00000343742 TUBB4AP04350 444 aa13.75□□□□□ -0.21
LRRK2-202ENST00000343742 LMAN1P49257 510 aa13.75□□□□□ -0.21
LRRK2-202ENST00000343742 CDR1P51861 262 aa13.75□□□□□ -0.21
LRRK2-202ENST00000343742 STK4Q13043 487 aa13.75□□□□□ -0.21
LRRK2-202ENST00000343742 LLGL1Q15334 1064 aa13.75□□□□□ -0.21
LRRK2-202ENST00000343742 MICALL2Q8IY33 904 aa13.75□□□□□ -0.21
LRRK2-202ENST00000343742 VTI1AQ96AJ9 217 aa13.75□□□□□ -0.21
LRRK2-202ENST00000343742 FUCA2Q9BTY2 467 aa13.75□□□□□ -0.21
LRRK2-202ENST00000343742 ACTN4O43707 911 aaKnown RBP13.75□□□□□ -0.21
LRRK2-202ENST00000343742 TNNI1P19237 187 aa13.75□□□□□ -0.21
LRRK2-202ENST00000343742 RASSF7Q02833 373 aa13.75□□□□□ -0.21
LRRK2-202ENST00000343742 U2AF1L4Q8WU68 220 aaKnown RBP13.75□□□□□ -0.21
LRRK2-202ENST00000343742 IRX2Q9BZI1 471 aaPredicted RBP13.75□□□□□ -0.21
LRRK2-202ENST00000343742 TRIM31Q9BZY9 425 aa13.75□□□□□ -0.21
LRRK2-202ENST00000343742 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.75□□□□□ -0.21
LRRK2-202ENST00000343742 SUGT1Q9Y2Z0 365 aa13.75□□□□□ -0.21
LRRK2-202ENST00000343742 IVNS1ABPQ9Y6Y0 642 aa13.75□□□□□ -0.21
LRRK2-202ENST00000343742 SALL1Q9NSC2 1324 aa13.75□□□□□ -0.21
LRRK2-202ENST00000343742 CTNNA2P26232 953 aa13.75□□□□□ -0.21
LRRK2-202ENST00000343742 EEF1GP26641 437 aaKnown RBP13.75□□□□□ -0.21
LRRK2-202ENST00000343742 IFI16Q16666 785 aaKnown RBP13.75□□□□□ -0.21
LRRK2-202ENST00000343742 DHX37Q8IY37 1157 aaKnown RBP13.75□□□□□ -0.21
LRRK2-202ENST00000343742 AZI2Q9H6S1 392 aa13.75□□□□□ -0.21
LRRK2-202ENST00000343742 TOPAZ1Q8N9V7 1692 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms