RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 CLRN2A0PK11 232 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 NDUFA10O95299 355 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 POLD1P28340 1107 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 TSNAXIP1Q2TAA8 658 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 ODR4Q5SWX8 454 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 FYB2Q5VWT5 728 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 CCDC170Q8IYT3 715 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 EPB41L5Q9HCM4 733 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 ELF1P32519 619 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 GGCXP38435 758 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 PSMC4P43686 418 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 ABCB5Q2M3G0 1257 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 TCP11X2Q5H9J9 407 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 GKAP1Q5VSY0 366 aaPredicted RBP8.81□□□□□ -1
UBE4B-202ENST00000343090 ARHGEF16Q5VV41 709 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 FAM196AQ6ZSG2 479 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 DBNDD1Q9H9R9 158 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 STK32BQ9NY57 414 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.81□□□□□ -1
UBE4B-202ENST00000343090 ARAP3Q8WWN8 1544 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 LRRN2O75325 713 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 ADCY8P40145 1251 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 PDCLQ13371 301 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 TCP11Q8WWU5 503 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 VCXQ9H320 206 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 STIM2Q9P246 746 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 LAD1O00515 517 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 SEMA3EO15041 775 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 HSPA1LP34931 641 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 MESDQ14696 234 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 CLUL1Q15846 466 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 PACS2Q86VP3 889 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 RPUSD2Q8IZ73 545 aaKnown RBP8.8□□□□□ -1
UBE4B-202ENST00000343090 STMN2Q93045 179 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 TRIM4Q9C037 500 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 AZI2Q9H6S1 392 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 ZNF408Q9H9D4 720 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 LY9Q9HBG7 655 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 PLCB1Q9NQ66 1216 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 TAF6LQ9Y6J9 622 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 POLR1AO95602 1720 aaPredicted RBP8.8□□□□□ -1
UBE4B-202ENST00000343090 SRGAP2O75044 1071 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 HEXIM1O94992 359 aaKnown RBP8.8□□□□□ -1
UBE4B-202ENST00000343090 TTLL1O95922 423 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 HNRNPH1P31943 449 aaKnown RBP8.8□□□□□ -1
UBE4B-202ENST00000343090 MAN2A1Q16706 1144 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 ARHGEF2Q92974 986 aaKnown RBP8.8□□□□□ -1
UBE4B-202ENST00000343090 WDR24Q96S15 920 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 PCIF1Q9H4Z3 704 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 ERVV-1B6SEH8 477 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 MFAP3LO75121 409 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 GAS8O95995 478 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 ATF7P17544 494 aaPredicted RBP8.8□□□□□ -1
UBE4B-202ENST00000343090 PTPREP23469 700 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 PRDX5P30044 214 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 PDE6BP35913 854 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 FOXO4P98177 505 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 CCDC38Q502W7 563 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 EP400NLQ6ZTU2 488 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 DEPTORQ8TB45 409 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 SAAL1Q96ER3 474 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 AK8Q96MA6 479 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 TEKT3Q9BXF9 490 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 CUEDC2Q9H467 287 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 NRKQ7Z2Y5 1582 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 DKC1O60832 514 aaKnown RBP eCLIP8.8□□□□□ -11e-6■■■■■ 36.2
UBE4B-202ENST00000343090 LUC7L3O95232 432 aaKnown RBP8.8□□□□□ -1
UBE4B-202ENST00000343090 STX2P32856 288 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 ADCY1Q08828 1119 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 NNTQ13423 1086 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 ASPRV1Q53RT3 343 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 BSPRYQ5W0U4 402 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 KAZNQ674X7 775 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 CCDC89Q8N998 374 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 SH3RF3Q8TEJ3 882 aaPredicted RBP8.8□□□□□ -1
UBE4B-202ENST00000343090 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.8□□□□□ -1
UBE4B-202ENST00000343090 PANX2Q96RD6 677 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 AMNQ9BXJ7 453 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 ACTR5Q9H9F9 607 aaPredicted RBP8.8□□□□□ -1
UBE4B-202ENST00000343090 MAGEF1Q9HAY2 307 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 DONSONQ9NYP3 566 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 LEMD3Q9Y2U8 911 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 CDC42BPGQ6DT37 1551 aa8.8□□□□□ -1
UBE4B-202ENST00000343090 CCNE1P24864 410 aa8.79□□□□□ -1
UBE4B-202ENST00000343090 LIG4P49917 911 aa8.79□□□□□ -1
UBE4B-202ENST00000343090 CRB1P82279 1406 aa8.79□□□□□ -1
UBE4B-202ENST00000343090 MYL7Q01449 175 aa8.79□□□□□ -1
UBE4B-202ENST00000343090 CASC4Q6P4E1 433 aa8.79□□□□□ -1
UBE4B-202ENST00000343090 NIM1KQ8IY84 436 aa8.79□□□□□ -1
UBE4B-202ENST00000343090 PPFIBP2Q8ND30 876 aa8.79□□□□□ -1
UBE4B-202ENST00000343090 STAG1Q8WVM7 1258 aa8.79□□□□□ -1
UBE4B-202ENST00000343090 GLG1Q92896 1179 aa8.79□□□□□ -1
UBE4B-202ENST00000343090 RNF34Q969K3 372 aa8.79□□□□□ -1
UBE4B-202ENST00000343090 METTL14Q9HCE5 456 aaKnown RBP8.79□□□□□ -1
UBE4B-202ENST00000343090 DISC1Q9NRI5 854 aa8.79□□□□□ -1
UBE4B-202ENST00000343090 MRPL11Q9Y3B7 192 aaKnown RBP8.79□□□□□ -1
UBE4B-202ENST00000343090 UBN2Q6ZU65 1347 aa8.79□□□□□ -1
UBE4B-202ENST00000343090 LRRD1A4D1F6 860 aa8.79□□□□□ -1
UBE4B-202ENST00000343090 PPEF1O14829 653 aaPredicted RBP8.79□□□□□ -1
UBE4B-202ENST00000343090 DAPK3O43293 454 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms