RNA–Protein interactions for RNA: ENST00000340578.10

RANBP3-202, Transcript of RAN binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RANBP3, Length 3,233 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-202ENST00000340578 CACNB3P54284 484 aa12.66□□□□□ -0.38
RANBP3-202ENST00000340578 ZNF543Q08ER8 600 aa12.66□□□□□ -0.38
RANBP3-202ENST00000340578 KRT79Q5XKE5 535 aa12.66□□□□□ -0.38
RANBP3-202ENST00000340578 FAM114A1Q8IWE2 563 aa12.66□□□□□ -0.38
RANBP3-202ENST00000340578 ZNF713Q8N859 430 aaPredicted RBP12.66□□□□□ -0.38
RANBP3-202ENST00000340578 RABGGTAQ92696 567 aa12.66□□□□□ -0.38
RANBP3-202ENST00000340578 ZNHIT6Q9NWK9 470 aaKnown RBP12.66□□□□□ -0.38
RANBP3-202ENST00000340578 CAPN11Q9UMQ6 739 aa12.66□□□□□ -0.38
RANBP3-202ENST00000340578 PNMA6FA0A0J9YX94 578 aa12.65□□□□□ -0.38
RANBP3-202ENST00000340578 MYMKA6NI61 221 aa12.65□□□□□ -0.38
RANBP3-202ENST00000340578 FAM196BA6NMK8 535 aa12.65□□□□□ -0.38
RANBP3-202ENST00000340578 USP17L10C9JJH3 530 aa12.65□□□□□ -0.38
RANBP3-202ENST00000340578 SRGNP10124 158 aa12.65□□□□□ -0.38
RANBP3-202ENST00000340578 ARHGAP25P42331 645 aa12.65□□□□□ -0.38
RANBP3-202ENST00000340578 NOVP48745 357 aa12.65□□□□□ -0.38
RANBP3-202ENST00000340578 NFIAQ12857 509 aa12.65□□□□□ -0.38
RANBP3-202ENST00000340578 CDC42EP5Q6NZY7 148 aa12.65□□□□□ -0.38
RANBP3-202ENST00000340578 CEP112Q8N8E3 955 aa12.65□□□□□ -0.38
RANBP3-202ENST00000340578 KIAA0895Q8NCT3 520 aa12.65□□□□□ -0.38
RANBP3-202ENST00000340578 NUDT12Q9BQG2 462 aa12.65□□□□□ -0.38
RANBP3-202ENST00000340578 ONECUT3O60422 494 aaPredicted RBP12.65□□□□□ -0.38
RANBP3-202ENST00000340578 SSBP05455 408 aaKnown RBP eCLIP12.65□□□□□ -0.38
RANBP3-202ENST00000340578 SHMT1P34896 483 aa12.65□□□□□ -0.38
RANBP3-202ENST00000340578 ZC3H12AQ5D1E8 599 aaKnown RBP12.65□□□□□ -0.38
RANBP3-202ENST00000340578 TEKT1Q969V4 418 aa12.65□□□□□ -0.38
RANBP3-202ENST00000340578 DBNDD1Q9H9R9 158 aa12.65□□□□□ -0.38
RANBP3-202ENST00000340578 BLOC1S4Q9NUP1 217 aa12.65□□□□□ -0.38
RANBP3-202ENST00000340578 FAM53CQ9NYF3 392 aa12.65□□□□□ -0.38
RANBP3-202ENST00000340578 NKRFO15226 690 aaKnown RBP eCLIP12.64□□□□□ -0.391e-6■■■□□ 18.7
RANBP3-202ENST00000340578 ZRANB2O95218 330 aaKnown RBP eCLIP12.64□□□□□ -0.39
RANBP3-202ENST00000340578 CC2D1AQ6P1N0 951 aaPredicted RBP12.64□□□□□ -0.39
RANBP3-202ENST00000340578 TMC4Q7Z404 712 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 KIAA1328Q86T90 577 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 ZSCAN29Q8IWY8 852 aaPredicted RBP12.64□□□□□ -0.39
RANBP3-202ENST00000340578 PNMA5Q96PV4 448 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 DNAJC7Q99615 494 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 SEMA6BQ9H3T3 888 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 ARFGAP3Q9NP61 516 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 SWAP70Q9UH65 585 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 LY75O60449 1722 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 TRIM66O15016 1216 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 PPP1R11O60927 126 aaPredicted RBP12.64□□□□□ -0.39
RANBP3-202ENST00000340578 SNHG28P0DPA3 235 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 CCDC122Q5T0U0 273 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 FKBP15Q5T1M5 1219 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 WDR59Q6PJI9 974 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 KIAA0825Q8IV33 1275 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 CUL5Q93034 780 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 RIC8AQ9NPQ8 531 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 KCNQ5Q9NR82 932 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
RANBP3-202ENST00000340578 DDX25Q9UHL0 483 aaKnown RBP12.64□□□□□ -0.39
RANBP3-202ENST00000340578 REXO2Q9Y3B8 237 aaKnown RBP12.64□□□□□ -0.39
RANBP3-202ENST00000340578 IGKV6D-41A0A0C4DH26 115 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 KLRG2A4D1S0 409 aaPredicted RBP12.64□□□□□ -0.39
RANBP3-202ENST00000340578 ENC1O14682 589 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 IPO7O95373 1038 aaKnown RBP12.64□□□□□ -0.39
RANBP3-202ENST00000340578 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.39
RANBP3-202ENST00000340578 MRPL12P52815 198 aaKnown RBP12.64□□□□□ -0.39
RANBP3-202ENST00000340578 LRRC41Q15345 812 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 GPIHBP1Q8IV16 184 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 ZFPM1Q8IX07 1006 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 CCDC97Q96F63 343 aaPredicted RBP12.64□□□□□ -0.39
RANBP3-202ENST00000340578 PSTPIP2Q9H939 334 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 STK17AQ9UEE5 414 aa12.64□□□□□ -0.39
RANBP3-202ENST00000340578 EDIL3O43854 480 aa12.63□□□□□ -0.39
RANBP3-202ENST00000340578 RHOXF2BP0C7M4 288 aa12.63□□□□□ -0.39
RANBP3-202ENST00000340578 PPP1R2P41236 205 aa12.63□□□□□ -0.39
RANBP3-202ENST00000340578 PLA2G4AP47712 749 aa12.63□□□□□ -0.39
RANBP3-202ENST00000340578 ORC2Q13416 577 aaPredicted RBP12.63□□□□□ -0.39
RANBP3-202ENST00000340578 DDX12PQ92771 950 aa12.63□□□□□ -0.39
RANBP3-202ENST00000340578 RHOXF2Q9BQY4 288 aa12.63□□□□□ -0.39
RANBP3-202ENST00000340578 SUGT1Q9Y2Z0 365 aa12.63□□□□□ -0.39
RANBP3-202ENST00000340578 GOLGB1Q14789 3259 aaKnown RBP12.63□□□□□ -0.39
RANBP3-202ENST00000340578 POLR3GO15318 223 aaPredicted RBP12.63□□□□□ -0.39
RANBP3-202ENST00000340578 MTA1Q13330 715 aa12.63□□□□□ -0.39
RANBP3-202ENST00000340578 GPATCH4Q5T3I0 446 aaKnown RBP12.63□□□□□ -0.39
RANBP3-202ENST00000340578 UNC13DQ70J99 1090 aa12.63□□□□□ -0.39
RANBP3-202ENST00000340578 KCNK18Q7Z418 384 aa12.63□□□□□ -0.39
RANBP3-202ENST00000340578 RAD54LQ92698 747 aa12.63□□□□□ -0.39
RANBP3-202ENST00000340578 NUP58Q9BVL2 599 aa12.63□□□□□ -0.39
RANBP3-202ENST00000340578 PCDHAC2Q9Y5I4 1007 aa12.63□□□□□ -0.39
RANBP3-202ENST00000340578 PLIN4Q96Q06 1357 aa12.63□□□□□ -0.39
RANBP3-202ENST00000340578 USP17L15C9J2P7 530 aa12.62□□□□□ -0.39
RANBP3-202ENST00000340578 USP17L13C9JLJ4 530 aa12.62□□□□□ -0.39
RANBP3-202ENST00000340578 USP17L11C9JVI0 530 aa12.62□□□□□ -0.39
RANBP3-202ENST00000340578 USP17L18D6R9N7 530 aa12.62□□□□□ -0.39
RANBP3-202ENST00000340578 USP17L22D6RA61 530 aa12.62□□□□□ -0.39
RANBP3-202ENST00000340578 USP17L17D6RBQ6 530 aa12.62□□□□□ -0.39
RANBP3-202ENST00000340578 USP17L19D6RCP7 530 aa12.62□□□□□ -0.39
RANBP3-202ENST00000340578 USP17L20D6RJB6 530 aa12.62□□□□□ -0.39
RANBP3-202ENST00000340578 ZBTB5O15062 677 aa12.62□□□□□ -0.39
RANBP3-202ENST00000340578 NPR1P16066 1061 aa12.62□□□□□ -0.39
RANBP3-202ENST00000340578 CYLC1P35663 651 aaPredicted RBP12.62□□□□□ -0.39
RANBP3-202ENST00000340578 USP17L24Q0WX57 530 aa12.62□□□□□ -0.39
RANBP3-202ENST00000340578 APOBEC3HQ6NTF7 200 aaKnown RBP12.62□□□□□ -0.39
RANBP3-202ENST00000340578 USP17L6PQ6QN14 398 aa12.62□□□□□ -0.39
RANBP3-202ENST00000340578 NHEJ1Q9H9Q4 299 aaPredicted RBP12.62□□□□□ -0.39
RANBP3-202ENST00000340578 FAM207AQ9NSI2 230 aaPredicted RBP12.62□□□□□ -0.39
RANBP3-202ENST00000340578 MYO1AQ9UBC5 1043 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms