RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 USP17L8P0C7I0 530 aa13.68□□□□□ -0.22
RIOK3-201ENST00000339486 CETN2P41208 172 aa13.68□□□□□ -0.22
RIOK3-201ENST00000339486 SLC1A4P43007 532 aa13.68□□□□□ -0.22
RIOK3-201ENST00000339486 STK4Q13043 487 aa13.68□□□□□ -0.22
RIOK3-201ENST00000339486 SLF2Q8IX21 1173 aa13.68□□□□□ -0.22
RIOK3-201ENST00000339486 DYNLL2Q96FJ2 89 aa13.68□□□□□ -0.22
RIOK3-201ENST00000339486 ATP8A2Q9NTI2 1148 aa13.68□□□□□ -0.22
RIOK3-201ENST00000339486 BTG4Q9NY30 223 aa13.68□□□□□ -0.22
RIOK3-201ENST00000339486 FAM53CQ9NYF3 392 aa13.68□□□□□ -0.22
RIOK3-201ENST00000339486 CTTNBP2NLQ9P2B4 639 aa13.68□□□□□ -0.22
RIOK3-201ENST00000339486 COL4A3BPQ9Y5P4 624 aa13.68□□□□□ -0.22
RIOK3-201ENST00000339486 RIMS1Q86UR5 1692 aaKnown RBP13.67□□□□□ -0.22
RIOK3-201ENST00000339486 PLEKHG2Q9H7P9 1386 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 XRCC5P13010 732 aaKnown RBP13.67□□□□□ -0.22
RIOK3-201ENST00000339486 HERVK_113P62684 666 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 CCDC6Q16204 474 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 STXBP4Q6ZWJ1 553 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 RPAINQ86UA6 219 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 ANKRD42Q8N9B4 389 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 IFT74Q96LB3 600 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 CCT8L2Q96SF2 557 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 PLVAPQ9BX97 442 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 MTUS1Q9ULD2 1270 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 PCDHA12Q9UN75 941 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 SIGLEC1Q9BZZ2 1709 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 USP17L3A6NCW0 530 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 USP17L4A6NCW7 530 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 SPOPO43791 374 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 GNA14O95837 355 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 SERPING1P05155 500 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 LSP1P33241 339 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 EARS2Q5JPH6 523 aaKnown RBP13.67□□□□□ -0.22
RIOK3-201ENST00000339486 SEL1L2Q5TEA6 688 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 PAPD7Q5XG87 772 aaKnown RBP13.67□□□□□ -0.22
RIOK3-201ENST00000339486 USP17L1Q7RTZ2 530 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 PIGBQ92521 554 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 ATP6V1G3Q96LB4 118 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 EYA3Q99504 573 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 CCDC87Q9NVE4 849 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 CUL5Q93034 780 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 CCDC77Q9BR77 488 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 CXorf56Q9H5V9 222 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 ACTR5Q9H9F9 607 aaPredicted RBP13.67□□□□□ -0.22
RIOK3-201ENST00000339486 KANSL2Q9H9L4 492 aa13.67□□□□□ -0.22
RIOK3-201ENST00000339486 CSF1RP07333 972 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 STAT1P42224 750 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 ARHGAP44Q17R89 818 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 CCDC105Q8IYK2 499 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 INTS9Q9NV88 658 aaKnown RBP13.66□□□□□ -0.22
RIOK3-201ENST00000339486 CAPN6Q9Y6Q1 641 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 PLTPP55058 493 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 KCNB1Q14721 858 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 FBF1Q8TES7 1133 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 ANKRD2Q9GZV1 360 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 SH2D4AQ9H788 454 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 NKIRAS1Q9NYS0 192 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 CD2APQ9Y5K6 639 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 FRMPD2Q68DX3 1309 aaPredicted RBP13.66□□□□□ -0.22
RIOK3-201ENST00000339486 GMNCA6NCL1 334 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 ATP11AP98196 1134 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 EXOC3L4Q17RC7 722 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 SUSD4Q5VX71 490 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 HDAC7Q8WUI4 952 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 DDX47Q9H0S4 455 aaKnown RBP13.66□□□□□ -0.22
RIOK3-201ENST00000339486 PLCB1Q9NQ66 1216 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 KLC4Q9NSK0 619 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 SLIT1O75093 1534 aa13.66□□□□□ -0.22
RIOK3-201ENST00000339486 GJC1P36383 396 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 PEX19P40855 299 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 INTS8Q75QN2 995 aaKnown RBP13.65□□□□□ -0.22
RIOK3-201ENST00000339486 ZNF473Q8WTR7 871 aaKnown RBP13.65□□□□□ -0.22
RIOK3-201ENST00000339486 TRIM9Q9C026 710 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 EPN3Q9H201 632 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 RIC8AQ9NPQ8 531 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 ATP6V0A2Q9Y487 856 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 OVOS2A0A0G2JMS6 1433 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 JCADQ9P266 1359 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 NR2F2P24468 414 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 GCKP35557 465 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 RPS8P62241 208 aaKnown RBP13.65□□□□□ -0.22
RIOK3-201ENST00000339486 SETDB1Q15047 1291 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 FAM133BQ5BKY9 247 aaKnown RBP13.65□□□□□ -0.22
RIOK3-201ENST00000339486 FAM83BQ5T0W9 1011 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 USP17L2Q6R6M4 530 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 TAOK1Q7L7X3 1001 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 MMGT1Q8N4V1 131 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 RNPC3Q96LT9 517 aaKnown RBP13.65□□□□□ -0.22
RIOK3-201ENST00000339486 CCDC169A6NNP5 214 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 GCNT3O95395 438 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 SLCO1A2P46721 670 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 MAGOHP61326 146 aaKnown RBP13.65□□□□□ -0.22
RIOK3-201ENST00000339486 VSIG1Q86XK7 387 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 RNF10Q8N5U6 811 aaKnown RBP13.65□□□□□ -0.22
RIOK3-201ENST00000339486 MAGOHBQ96A72 148 aaKnown RBP13.65□□□□□ -0.22
RIOK3-201ENST00000339486 DNAJC7Q99615 494 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 ASIC3Q9UHC3 531 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 KIAA1024Q9UPX6 916 aa13.65□□□□□ -0.22
RIOK3-201ENST00000339486 PDS5AQ29RF7 1337 aaKnown RBP13.64□□□□□ -0.23
RIOK3-201ENST00000339486 PNPLA7Q6ZV29 1317 aa13.64□□□□□ -0.23
RIOK3-201ENST00000339486 SPDYE3A6NKU9 549 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms