RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 GPRC5DQ9NZD1 345 aa18.23■□□□□ 0.51
LITAF-201ENST00000339430 TDP2O95551 362 aa18.22■□□□□ 0.51
LITAF-201ENST00000339430 KLK7P49862 253 aa18.22■□□□□ 0.51
LITAF-201ENST00000339430 FAM83AQ86UY5 434 aa18.22■□□□□ 0.51
LITAF-201ENST00000339430 TUBGCP2Q9BSJ2 902 aa18.22■□□□□ 0.51
LITAF-201ENST00000339430 CUEDC2Q9H467 287 aa18.22■□□□□ 0.51
LITAF-201ENST00000339430 TRIM10Q9UDY6 481 aa18.22■□□□□ 0.51
LITAF-201ENST00000339430 SLC37A4O43826 429 aa18.22■□□□□ 0.51
LITAF-201ENST00000339430 DDNO94850 711 aaPredicted RBP18.22■□□□□ 0.51
LITAF-201ENST00000339430 ARHGAP25P42331 645 aa18.22■□□□□ 0.51
LITAF-201ENST00000339430 CERKLQ49MI3 558 aaPredicted RBP18.22■□□□□ 0.51
LITAF-201ENST00000339430 TATDN1Q6P1N9 297 aa18.22■□□□□ 0.51
LITAF-201ENST00000339430 P2RX5Q93086 422 aa18.22■□□□□ 0.51
LITAF-201ENST00000339430 CCDC47Q96A33 483 aaKnown RBP18.22■□□□□ 0.51
LITAF-201ENST00000339430 CALML4Q96GE6 196 aa18.22■□□□□ 0.51
LITAF-201ENST00000339430 PARD6BQ9BYG5 372 aa18.22■□□□□ 0.51
LITAF-201ENST00000339430 TFR2Q9UP52 801 aa18.22■□□□□ 0.51
LITAF-201ENST00000339430 LUC7L2Q9Y383 392 aaKnown RBP18.22■□□□□ 0.51
LITAF-201ENST00000339430 PLIN4Q96Q06 1357 aa18.21■□□□□ 0.51
LITAF-201ENST00000339430 CTAGE9A4FU28 777 aa18.21■□□□□ 0.51
LITAF-201ENST00000339430 NKRFO15226 690 aaKnown RBP eCLIP18.21■□□□□ 0.51
LITAF-201ENST00000339430 CHMP4BP1P59074 171 aa18.21■□□□□ 0.51
LITAF-201ENST00000339430 ATP2B2Q01814 1243 aa18.21■□□□□ 0.51
LITAF-201ENST00000339430 GABPB1Q06547 395 aaPredicted RBP18.21■□□□□ 0.51
LITAF-201ENST00000339430 CALCRLQ16602 461 aa18.21■□□□□ 0.51
LITAF-201ENST00000339430 SHROOM1Q2M3G4 852 aaPredicted RBP18.21■□□□□ 0.51
LITAF-201ENST00000339430 OR8K1Q8NGG5 319 aa18.21■□□□□ 0.51
LITAF-201ENST00000339430 DHTKD1Q96HY7 919 aaPredicted RBP18.21■□□□□ 0.51
LITAF-201ENST00000339430 C7orf25Q9BPX7 421 aa18.21■□□□□ 0.51
LITAF-201ENST00000339430 SLC39A2Q9NP94 309 aa18.21■□□□□ 0.51
LITAF-201ENST00000339430 CDC23Q9UJX2 597 aa18.21■□□□□ 0.51
LITAF-201ENST00000339430 EPN1Q9Y6I3 576 aaPredicted RBP18.21■□□□□ 0.51
LITAF-201ENST00000339430 NDUFA10O95299 355 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 CCNE1P24864 410 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 EPS15P42566 896 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 PLA2G4AP47712 749 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 NOVP48745 357 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 ADCY7P51828 1080 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 ZNF771Q7L3S4 317 aaPredicted RBP18.2■□□□□ 0.5
LITAF-201ENST00000339430 CNOT6LQ96LI5 555 aaKnown RBP18.2■□□□□ 0.5
LITAF-201ENST00000339430 CCDC17Q96LX7 622 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 MAGEF1Q9HAY2 307 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 LRWD1Q9UFC0 647 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 HACL1Q9UJ83 578 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 REXO2Q9Y3B8 237 aaKnown RBP18.2■□□□□ 0.5
LITAF-201ENST00000339430 IGKV6D-41A0A0C4DH26 115 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 POTEMA6NI47 508 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 SMARCA1P28370 1054 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 MCM6Q14566 821 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 RASA3Q14644 834 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 UBE2SQ16763 222 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 DYMQ7RTS9 669 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 SRGAP1Q7Z6B7 1085 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 RABGGTAQ92696 567 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.2■□□□□ 0.53e-7■■■□□ 18
LITAF-201ENST00000339430 AGPAT5Q9NUQ2 364 aa18.2■□□□□ 0.5
LITAF-201ENST00000339430 A0A1W2PQC6 194 aa18.19■□□□□ 0.5
LITAF-201ENST00000339430 EDIL3O43854 480 aa18.19■□□□□ 0.5
LITAF-201ENST00000339430 MTIF2P46199 727 aaKnown RBP18.19■□□□□ 0.5
LITAF-201ENST00000339430 TNNI2P48788 182 aa18.19■□□□□ 0.5
LITAF-201ENST00000339430 GRB10Q13322 594 aa18.19■□□□□ 0.5
LITAF-201ENST00000339430 TTBK2Q6IQ55 1244 aa18.19■□□□□ 0.5
LITAF-201ENST00000339430 CC2D1AQ6P1N0 951 aaPredicted RBP18.19■□□□□ 0.5
LITAF-201ENST00000339430 WDR59Q6PJI9 974 aa18.19■□□□□ 0.5
LITAF-201ENST00000339430 KIAA0895Q8NCT3 520 aa18.19■□□□□ 0.5
LITAF-201ENST00000339430 TRPM4Q8TD43 1214 aa18.19■□□□□ 0.5
LITAF-201ENST00000339430 PCMTD1Q96MG8 357 aaPredicted RBP18.19■□□□□ 0.5
LITAF-201ENST00000339430 GUCA1BQ9UMX6 200 aa18.19■□□□□ 0.5
LITAF-201ENST00000339430 GDF11O95390 407 aa18.19■□□□□ 0.5
LITAF-201ENST00000339430 SLC16A2P36021 539 aa18.19■□□□□ 0.5
LITAF-201ENST00000339430 DNM2P50570 870 aa18.19■□□□□ 0.5
LITAF-201ENST00000339430 ASPRV1Q53RT3 343 aa18.19■□□□□ 0.5
LITAF-201ENST00000339430 MIGA2Q7L4E1 593 aa18.19■□□□□ 0.5
LITAF-201ENST00000339430 GJA10Q969M2 543 aa18.19■□□□□ 0.5
LITAF-201ENST00000339430 MTMR9Q96QG7 549 aa18.19■□□□□ 0.5
LITAF-201ENST00000339430 UIMC1Q96RL1 719 aa18.19■□□□□ 0.5
LITAF-201ENST00000339430 HERC5Q9UII4 1024 aaKnown RBP18.19■□□□□ 0.5
LITAF-201ENST00000339430 CAPN11Q9UMQ6 739 aa18.19■□□□□ 0.5
LITAF-201ENST00000339430 ESYT2A0FGR8 921 aa18.18■□□□□ 0.5
LITAF-201ENST00000339430 TRIM21P19474 475 aaKnown RBP18.18■□□□□ 0.5
LITAF-201ENST00000339430 AMPD3Q01432 767 aa18.18■□□□□ 0.5
LITAF-201ENST00000339430 TBC1D8BQ0IIM8 1120 aa18.18■□□□□ 0.5
LITAF-201ENST00000339430 TNFAIP1Q13829 316 aa18.18■□□□□ 0.5
LITAF-201ENST00000339430 SV2BQ7L1I2 683 aa18.18■□□□□ 0.5
LITAF-201ENST00000339430 CDK5RAP3Q96JB5 506 aa18.18■□□□□ 0.5
LITAF-201ENST00000339430 PNMA5Q96PV4 448 aa18.18■□□□□ 0.5
LITAF-201ENST00000339430 NAPGQ99747 312 aaPredicted RBP18.18■□□□□ 0.5
LITAF-201ENST00000339430 BLOC1S4Q9NUP1 217 aa18.18■□□□□ 0.5
LITAF-201ENST00000339430 PGAP2Q9UHJ9 254 aa18.18■□□□□ 0.5
LITAF-201ENST00000339430 BICDL2A1A5D9 508 aa18.18■□□□□ 0.5
LITAF-201ENST00000339430 SASH3O75995 380 aa18.18■□□□□ 0.5
LITAF-201ENST00000339430 RRP1BQ14684 758 aaKnown RBP18.18■□□□□ 0.5
LITAF-201ENST00000339430 TERF2Q15554 542 aa18.18■□□□□ 0.5
LITAF-201ENST00000339430 TSR1Q2NL82 804 aaKnown RBP18.18■□□□□ 0.5
LITAF-201ENST00000339430 ADGRF4Q8IZF3 695 aa18.18■□□□□ 0.5
LITAF-201ENST00000339430 NOC3LQ8WTT2 800 aaKnown RBP18.18■□□□□ 0.5
LITAF-201ENST00000339430 DNAJC7Q99615 494 aa18.18■□□□□ 0.5
LITAF-201ENST00000339430 NUDT12Q9BQG2 462 aa18.18■□□□□ 0.5
LITAF-201ENST00000339430 SEMA6BQ9H3T3 888 aa18.18■□□□□ 0.5
LITAF-201ENST00000339430 JMJD4Q9H9V9 463 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms