RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 TRIM29Q14134 588 aa19.13■□□□□ 0.65
SFN-201ENST00000339276 PCNX4Q63HM2 1172 aa19.13■□□□□ 0.65
SFN-201ENST00000339276 GALNT17Q6IS24 598 aa19.13■□□□□ 0.65
SFN-201ENST00000339276 OXER1Q8TDS5 423 aa19.13■□□□□ 0.65
SFN-201ENST00000339276 C8orf76Q96K31 380 aa19.13■□□□□ 0.65
SFN-201ENST00000339276 EHMT1Q9H9B1 1298 aa19.13■□□□□ 0.65
SFN-201ENST00000339276 FAM184BQ9ULE4 1060 aa19.13■□□□□ 0.65
SFN-201ENST00000339276 SMC3Q9UQE7 1217 aa19.13■□□□□ 0.65
SFN-201ENST00000339276 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.13■□□□□ 0.65
SFN-201ENST00000339276 MYH7BA7E2Y1 1941 aa19.12■□□□□ 0.65
SFN-201ENST00000339276 EIF3JO75822 258 aaKnown RBP19.12■□□□□ 0.65
SFN-201ENST00000339276 RGS20O76081 388 aa19.12■□□□□ 0.65
SFN-201ENST00000339276 MMP1P03956 469 aa19.12■□□□□ 0.65
SFN-201ENST00000339276 GJB1P08034 283 aa19.12■□□□□ 0.65
SFN-201ENST00000339276 PTGS1P23219 599 aa19.12■□□□□ 0.65
SFN-201ENST00000339276 SREBF1P36956 1147 aa19.12■□□□□ 0.65
SFN-201ENST00000339276 TMEM63BQ5T3F8 832 aa19.12■□□□□ 0.65
SFN-201ENST00000339276 LHX8Q68G74 356 aa19.12■□□□□ 0.65
SFN-201ENST00000339276 MCTP2Q6DN12 878 aa19.12■□□□□ 0.65
SFN-201ENST00000339276 SEPT14Q6ZU15 432 aa19.12■□□□□ 0.65
SFN-201ENST00000339276 U2AF1L4Q8WU68 220 aaKnown RBP19.12■□□□□ 0.65
SFN-201ENST00000339276 POTEFA5A3E0 1075 aa19.11■□□□□ 0.65
SFN-201ENST00000339276 FOXD4L1Q9NU39 408 aa19.11■□□□□ 0.65
SFN-201ENST00000339276 RTEL1Q9NZ71 1219 aa19.11■□□□□ 0.65
SFN-201ENST00000339276 RBM47A0AV96 593 aaKnown RBP19.1■□□□□ 0.65
SFN-201ENST00000339276 MSCO60682 206 aa19.1■□□□□ 0.65
SFN-201ENST00000339276 ARIH2O95376 493 aa19.1■□□□□ 0.65
SFN-201ENST00000339276 SGPL1O95470 568 aa19.1■□□□□ 0.65
SFN-201ENST00000339276 SMPD1P17405 629 aa19.1■□□□□ 0.65
SFN-201ENST00000339276 KRT2P35908 639 aa19.1■□□□□ 0.65
SFN-201ENST00000339276 GJA8P48165 433 aa19.1■□□□□ 0.65
SFN-201ENST00000339276 SOX10P56693 466 aa19.1■□□□□ 0.65
SFN-201ENST00000339276 ARHGAP4P98171 946 aa19.1■□□□□ 0.65
SFN-201ENST00000339276 TNFAIP2Q03169 654 aa19.1■□□□□ 0.65
SFN-201ENST00000339276 NR5A1Q13285 461 aa19.1■□□□□ 0.65
SFN-201ENST00000339276 GJC2Q5T442 439 aaPredicted RBP19.1■□□□□ 0.65
SFN-201ENST00000339276 XRRA1Q6P2D8 792 aa19.1■□□□□ 0.65
SFN-201ENST00000339276 SCFD2Q8WU76 684 aa19.1■□□□□ 0.65
SFN-201ENST00000339276 CRYGNQ8WXF5 182 aa19.1■□□□□ 0.65
SFN-201ENST00000339276 WDR11Q9BZH6 1224 aa19.1■□□□□ 0.65
SFN-201ENST00000339276 KIF3AQ9Y496 699 aa19.1■□□□□ 0.65
SFN-201ENST00000339276 KIAA0100Q14667 2235 aaKnown RBP19.1■□□□□ 0.65
SFN-201ENST00000339276 STAM2O75886 525 aa19.09■□□□□ 0.65
SFN-201ENST00000339276 RARBP10826 455 aa19.09■□□□□ 0.65
SFN-201ENST00000339276 IQSEC1Q6DN90 963 aa19.09■□□□□ 0.65
SFN-201ENST00000339276 DIS3L2Q8IYB7 885 aaKnown RBP19.09■□□□□ 0.65
SFN-201ENST00000339276 FBXO18Q8NFZ0 1043 aa19.09■□□□□ 0.65
SFN-201ENST00000339276 INTS4Q96HW7 963 aaKnown RBP19.09■□□□□ 0.65
SFN-201ENST00000339276 INPP4AQ96PE3 977 aaPredicted RBP19.09■□□□□ 0.65
SFN-201ENST00000339276 CRISPLD2Q9H0B8 497 aa19.09■□□□□ 0.65
SFN-201ENST00000339276 BRMS1Q9HCU9 246 aa19.09■□□□□ 0.65
SFN-201ENST00000339276 BTBD18B2RXH4 712 aa19.08■□□□□ 0.65
SFN-201ENST00000339276 ITGB5P18084 799 aa19.08■□□□□ 0.65
SFN-201ENST00000339276 TTLL4Q14679 1199 aa19.08■□□□□ 0.65
SFN-201ENST00000339276 EARS2Q5JPH6 523 aaKnown RBP19.08■□□□□ 0.65
SFN-201ENST00000339276 CCDC62Q6P9F0 684 aa19.08■□□□□ 0.65
SFN-201ENST00000339276 KRT25Q7Z3Z0 450 aa19.08■□□□□ 0.65
SFN-201ENST00000339276 TNFRSF25Q93038 417 aa19.08■□□□□ 0.65
SFN-201ENST00000339276 XPNPEP3Q9NQH7 507 aa19.08■□□□□ 0.65
SFN-201ENST00000339276 GNEQ9Y223 722 aaKnown RBP19.08■□□□□ 0.65
SFN-201ENST00000339276 UBIAD1Q9Y5Z9 338 aa19.08■□□□□ 0.65
SFN-201ENST00000339276 MRVI1Q9Y6F6 885 aa19.08■□□□□ 0.65
SFN-201ENST00000339276 SYNRGQ9UMZ2 1314 aa19.07■□□□□ 0.64
SFN-201ENST00000339276 CCDC194A0A1B0GVG4 234 aa19.07■□□□□ 0.64
SFN-201ENST00000339276 FAM205CA6NFA0 338 aa19.07■□□□□ 0.64
SFN-201ENST00000339276 EDIL3O43854 480 aa19.07■□□□□ 0.64
SFN-201ENST00000339276 DUSP11O75319 330 aaKnown RBP19.07■□□□□ 0.64
SFN-201ENST00000339276 PGK1P00558 417 aa19.07■□□□□ 0.64
SFN-201ENST00000339276 TFRCP02786 760 aaKnown RBP19.07■□□□□ 0.64
SFN-201ENST00000339276 TXNP10599 105 aaKnown RBP19.07■□□□□ 0.64
SFN-201ENST00000339276 EN2P19622 333 aaPredicted RBP19.07■□□□□ 0.64
SFN-201ENST00000339276 SEMA3FQ13275 785 aa19.07■□□□□ 0.64
SFN-201ENST00000339276 NONOQ15233 471 aaKnown RBP eCLIP19.07■□□□□ 0.64
SFN-201ENST00000339276 LY6KQ17RY6 165 aa19.07■□□□□ 0.64
SFN-201ENST00000339276 GNPTABQ3T906 1256 aa19.07■□□□□ 0.64
SFN-201ENST00000339276 DUSP28Q4G0W2 176 aa19.07■□□□□ 0.64
SFN-201ENST00000339276 PIK3AP1Q6ZUJ8 805 aa19.07■□□□□ 0.64
SFN-201ENST00000339276 CYP2W1Q8TAV3 490 aa19.07■□□□□ 0.64
SFN-201ENST00000339276 TBCKQ8TEA7 893 aa19.07■□□□□ 0.64
SFN-201ENST00000339276 COPS5Q92905 334 aa19.07■□□□□ 0.64
SFN-201ENST00000339276 OGDHLQ9ULD0 1010 aa19.07■□□□□ 0.64
SFN-201ENST00000339276 CYP3A4P08684 503 aa19.06■□□□□ 0.64
SFN-201ENST00000339276 IRX5P78411 483 aaPredicted RBP19.06■□□□□ 0.64
SFN-201ENST00000339276 SAFBQ15424 915 aaKnown RBP eCLIP19.06■□□□□ 0.64
SFN-201ENST00000339276 INF2Q27J81 1249 aa19.06■□□□□ 0.64
SFN-201ENST00000339276 TLK2Q86UE8 772 aa19.06■□□□□ 0.64
SFN-201ENST00000339276 MXRA8Q9BRK3 442 aa19.06■□□□□ 0.64
SFN-201ENST00000339276 JADE2Q9NQC1 790 aa19.06■□□□□ 0.64
SFN-201ENST00000339276 DDX41Q9UJV9 622 aaKnown RBP19.06■□□□□ 0.64
SFN-201ENST00000339276 MYADML2A6NDP7 307 aa19.05■□□□□ 0.64
SFN-201ENST00000339276 SPATA31C2B4DYI2 1134 aa19.05■□□□□ 0.64
SFN-201ENST00000339276 FAM86B1E9PN63 330 aa19.05■□□□□ 0.64
SFN-201ENST00000339276 FIBPO43427 364 aa19.05■□□□□ 0.64
SFN-201ENST00000339276 ADAMTS4O75173 837 aa19.05■□□□□ 0.64
SFN-201ENST00000339276 MYCNP04198 464 aaPredicted RBP19.05■□□□□ 0.64
SFN-201ENST00000339276 FAM86B2P0C5J1 330 aa19.05■□□□□ 0.64
SFN-201ENST00000339276 ICAM3P32942 547 aa19.05■□□□□ 0.64
SFN-201ENST00000339276 ZNF76P36508 570 aa19.05■□□□□ 0.64
SFN-201ENST00000339276 SP2Q02086 613 aa19.05■□□□□ 0.64
SFN-201ENST00000339276 CEP55Q53EZ4 464 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms