RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SLC30A10Q6XR72 485 aa25.16■■□□□ 1.62
PDLIM2-203ENST00000339162 DYMQ7RTS9 669 aa25.16■■□□□ 1.62
PDLIM2-203ENST00000339162 NELFBQ8WX92 580 aa25.16■■□□□ 1.62
PDLIM2-203ENST00000339162 HPS3Q969F9 1004 aa25.16■■□□□ 1.62
PDLIM2-203ENST00000339162 KLRG1Q96E93 195 aa25.16■■□□□ 1.62
PDLIM2-203ENST00000339162 C7orf25Q9BPX7 421 aa25.16■■□□□ 1.62
PDLIM2-203ENST00000339162 INTS13Q9NVM9 706 aa25.16■■□□□ 1.62
PDLIM2-203ENST00000339162 ABCB11O95342 1321 aa25.16■■□□□ 1.62
PDLIM2-203ENST00000339162 SSC5DA1L4H1 1573 aa25.15■■□□□ 1.62
PDLIM2-203ENST00000339162 MYMKA6NI61 221 aa25.15■■□□□ 1.62
PDLIM2-203ENST00000339162 NFIBO00712 420 aa25.15■■□□□ 1.62
PDLIM2-203ENST00000339162 MSH4O15457 936 aa25.15■■□□□ 1.62
PDLIM2-203ENST00000339162 RHOBTB3O94955 611 aa25.15■■□□□ 1.62
PDLIM2-203ENST00000339162 BACE1P56817 501 aa25.15■■□□□ 1.62
PDLIM2-203ENST00000339162 KCNB1Q14721 858 aa25.15■■□□□ 1.62
PDLIM2-203ENST00000339162 LRRC8AQ8IWT6 810 aa25.15■■□□□ 1.62
PDLIM2-203ENST00000339162 SLFN12Q8IYM2 578 aa25.15■■□□□ 1.62
PDLIM2-203ENST00000339162 ZNF280CQ8ND82 737 aa25.15■■□□□ 1.62
PDLIM2-203ENST00000339162 RAD54LQ92698 747 aa25.15■■□□□ 1.62
PDLIM2-203ENST00000339162 STK17AQ9UEE5 414 aa25.15■■□□□ 1.62
PDLIM2-203ENST00000339162 POLR2AP24928 1970 aaKnown RBP25.15■■□□□ 1.62
PDLIM2-203ENST00000339162 ALAS1P13196 640 aa25.14■■□□□ 1.62
PDLIM2-203ENST00000339162 CIITAP33076 1130 aa25.14■■□□□ 1.62
PDLIM2-203ENST00000339162 AMPD3Q01432 767 aa25.14■■□□□ 1.62
PDLIM2-203ENST00000339162 PDE4DQ08499 809 aa25.14■■□□□ 1.62
PDLIM2-203ENST00000339162 PAK1Q13153 545 aa25.14■■□□□ 1.62
PDLIM2-203ENST00000339162 TMEM119Q4V9L6 283 aa25.14■■□□□ 1.62
PDLIM2-203ENST00000339162 HMGCS2P54868 508 aa25.14■■□□□ 1.61
PDLIM2-203ENST00000339162 WNK4Q96J92 1243 aa25.14■■□□□ 1.61
PDLIM2-203ENST00000339162 KIAA1024Q9UPX6 916 aa25.14■■□□□ 1.61
PDLIM2-203ENST00000339162 POTEB3A0JP26 581 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 POTECB2RU33 542 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 CBFA2T2O43439 604 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 CYP3A4P08684 503 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 FCER1AP12319 257 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 SPIRE1Q08AE8 756 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 TPD52L1Q16890 204 aaPredicted RBP25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 C9orf131Q5VYM1 1079 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 NCAPH2Q6IBW4 605 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 POTEBQ6S5H4 581 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 KIAA1524Q8TCG1 905 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 WDR18Q9BV38 432 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 SLC38A10Q9HBR0 1119 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 DOCK1Q14185 1865 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 IGLV3-22A0A075B6J6 115 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 TRIM49BA6NDI0 452 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 USP14P54578 494 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 ADSSL1Q8N142 457 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 GIMAP8Q8ND71 665 aaPredicted RBP25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 EXOC1Q9NV70 894 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 RWDD2AQ9UIY3 292 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 PPP1R9AQ9ULJ8 1098 aa25.13■■□□□ 1.61
PDLIM2-203ENST00000339162 E9PMD0 336 aa25.12■■□□□ 1.61
PDLIM2-203ENST00000339162 STK4Q13043 487 aa25.12■■□□□ 1.61
PDLIM2-203ENST00000339162 AS3MTQ9HBK9 375 aa25.12■■□□□ 1.61
PDLIM2-203ENST00000339162 MED24O75448 989 aa25.12■■□□□ 1.61
PDLIM2-203ENST00000339162 SSBP05455 408 aaKnown RBP eCLIP25.12■■□□□ 1.61
PDLIM2-203ENST00000339162 PMS1P54277 932 aaKnown RBP25.12■■□□□ 1.61
PDLIM2-203ENST00000339162 MUM1L1Q5H9M0 696 aa25.12■■□□□ 1.61
PDLIM2-203ENST00000339162 CLEC4DQ8WXI8 215 aa25.12■■□□□ 1.61
PDLIM2-203ENST00000339162 ADARB2Q9NS39 739 aaKnown RBP25.12■■□□□ 1.61
PDLIM2-203ENST00000339162 COL20A1Q9P218 1284 aa25.12■■□□□ 1.61
PDLIM2-203ENST00000339162 ADM5C9JUS6 153 aa25.11■■□□□ 1.61
PDLIM2-203ENST00000339162 TBX3O15119 743 aa25.11■■□□□ 1.61
PDLIM2-203ENST00000339162 NOLC1Q14978 699 aaKnown RBP eCLIP25.11■■□□□ 1.61
PDLIM2-203ENST00000339162 CDKAL1Q5VV42 579 aa25.11■■□□□ 1.61
PDLIM2-203ENST00000339162 ATG4CQ96DT6 458 aa25.11■■□□□ 1.61
PDLIM2-203ENST00000339162 SUPT20HL1Q3ZLR7 823 aa25.1■■□□□ 1.61
PDLIM2-203ENST00000339162 CREBRFQ8IUR6 639 aa25.1■■□□□ 1.61
PDLIM2-203ENST00000339162 IMPACTQ9P2X3 320 aa25.1■■□□□ 1.61
PDLIM2-203ENST00000339162 PPP2R3BQ9Y5P8 575 aa25.1■■□□□ 1.61
PDLIM2-203ENST00000339162 POTEFA5A3E0 1075 aa25.1■■□□□ 1.61
PDLIM2-203ENST00000339162 POTEIP0CG38 1075 aa25.1■■□□□ 1.61
PDLIM2-203ENST00000339162 POTEGQ6S5H5 508 aa25.1■■□□□ 1.61
PDLIM2-203ENST00000339162 POTEEQ6S8J3 1075 aa25.1■■□□□ 1.61
PDLIM2-203ENST00000339162 DDX12PQ92771 950 aa25.1■■□□□ 1.61
PDLIM2-203ENST00000339162 FAM20AQ96MK3 541 aa25.1■■□□□ 1.61
PDLIM2-203ENST00000339162 CTDP1Q9Y5B0 961 aaPredicted RBP25.1■■□□□ 1.61
PDLIM2-203ENST00000339162 USP2O75604 605 aaPredicted RBP25.09■■□□□ 1.61
PDLIM2-203ENST00000339162 IDEP14735 1019 aa25.09■■□□□ 1.61
PDLIM2-203ENST00000339162 ARMCX5Q6P1M9 558 aa25.09■■□□□ 1.61
PDLIM2-203ENST00000339162 APTXQ7Z2E3 356 aaKnown RBP25.09■■□□□ 1.61
PDLIM2-203ENST00000339162 VSTM4Q8IW00 320 aa25.09■■□□□ 1.61
PDLIM2-203ENST00000339162 SLC39A2Q9NP94 309 aa25.09■■□□□ 1.61
PDLIM2-203ENST00000339162 MEIS1O00470 390 aa25.09■■□□□ 1.61
PDLIM2-203ENST00000339162 HSD17B4P51659 736 aa25.09■■□□□ 1.61
PDLIM2-203ENST00000339162 HYIQ5T013 277 aa25.09■■□□□ 1.61
PDLIM2-203ENST00000339162 CATSPER3Q86XQ3 398 aa25.09■■□□□ 1.61
PDLIM2-203ENST00000339162 CCDC47Q96A33 483 aaKnown RBP25.09■■□□□ 1.61
PDLIM2-203ENST00000339162 NT5C3AQ9H0P0 336 aa25.09■■□□□ 1.61
PDLIM2-203ENST00000339162 KDM3AQ9Y4C1 1321 aa25.08■■□□□ 1.61
PDLIM2-203ENST00000339162 VAV3Q9UKW4 847 aa25.08■■□□□ 1.61
PDLIM2-203ENST00000339162 VWA5AO00534 786 aa25.08■■□□□ 1.6
PDLIM2-203ENST00000339162 CYP4A11Q02928 519 aa25.08■■□□□ 1.6
PDLIM2-203ENST00000339162 GOLGA8FQ08AF8 430 aa25.08■■□□□ 1.6
PDLIM2-203ENST00000339162 GOLGA8DPQ0D2H9 430 aa25.08■■□□□ 1.6
PDLIM2-203ENST00000339162 KIAA0895Q8NCT3 520 aa25.08■■□□□ 1.6
PDLIM2-203ENST00000339162 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.08■■□□□ 1.69e-7■□□□□ 8.4
PDLIM2-203ENST00000339162 DCPSQ96C86 337 aaKnown RBP25.08■■□□□ 1.6
PDLIM2-203ENST00000339162 EEF2KMTQ96G04 330 aa25.08■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms