RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 AFG1LQ8WV93 481 aa18.27■□□□□ 0.52
LINC01116-202ENST00000339037 KAT14Q9H8E8 782 aa18.27■□□□□ 0.52
LINC01116-202ENST00000339037 SCN5AQ14524 2016 aa18.27■□□□□ 0.51
LINC01116-202ENST00000339037 TANC1Q9C0D5 1861 aa18.26■□□□□ 0.51
LINC01116-202ENST00000339037 GH1P01241 217 aa18.26■□□□□ 0.51
LINC01116-202ENST00000339037 MMP3P08254 477 aa18.26■□□□□ 0.51
LINC01116-202ENST00000339037 SKIV2LQ15477 1246 aaKnown RBP18.26■□□□□ 0.51
LINC01116-202ENST00000339037 ASPRV1Q53RT3 343 aa18.26■□□□□ 0.51
LINC01116-202ENST00000339037 SEPT14Q6ZU15 432 aa18.26■□□□□ 0.51
LINC01116-202ENST00000339037 MCF2L2Q86YR7 1114 aa18.26■□□□□ 0.51
LINC01116-202ENST00000339037 HERC6Q8IVU3 1022 aa18.26■□□□□ 0.51
LINC01116-202ENST00000339037 ADGRF4Q8IZF3 695 aa18.26■□□□□ 0.51
LINC01116-202ENST00000339037 CAGE1Q8TC20 777 aa18.26■□□□□ 0.51
LINC01116-202ENST00000339037 SYTL5Q8TDW5 730 aaPredicted RBP18.26■□□□□ 0.51
LINC01116-202ENST00000339037 RMDN3Q96TC7 470 aa18.26■□□□□ 0.51
LINC01116-202ENST00000339037 CERS4Q9HA82 394 aa18.26■□□□□ 0.51
LINC01116-202ENST00000339037 KIF28PB7ZC32 967 aa18.25■□□□□ 0.51
LINC01116-202ENST00000339037 STK25O00506 426 aa18.25■□□□□ 0.51
LINC01116-202ENST00000339037 DHX16O60231 1041 aaKnown RBP18.25■□□□□ 0.51
LINC01116-202ENST00000339037 BAIAP3O94812 1187 aa18.25■□□□□ 0.51
LINC01116-202ENST00000339037 ARHGAP1Q07960 439 aa18.25■□□□□ 0.51
LINC01116-202ENST00000339037 STXBP2Q15833 593 aa18.25■□□□□ 0.51
LINC01116-202ENST00000339037 LY6KQ17RY6 165 aa18.25■□□□□ 0.51
LINC01116-202ENST00000339037 AAK1Q2M2I8 961 aa18.25■□□□□ 0.51
LINC01116-202ENST00000339037 CWC27Q6UX04 472 aaKnown RBP18.25■□□□□ 0.51
LINC01116-202ENST00000339037 CHST3Q7LGC8 479 aa18.25■□□□□ 0.51
LINC01116-202ENST00000339037 AFAP1L1Q8TED9 768 aa18.25■□□□□ 0.51
LINC01116-202ENST00000339037 TBC1D5Q92609 795 aa18.25■□□□□ 0.51
LINC01116-202ENST00000339037 TAAR1Q96RJ0 339 aa18.25■□□□□ 0.51
LINC01116-202ENST00000339037 IWS1Q96ST2 819 aa18.25■□□□□ 0.51
LINC01116-202ENST00000339037 ZSCAN10Q96SZ4 725 aaPredicted RBP18.25■□□□□ 0.51
LINC01116-202ENST00000339037 DIAPH3Q9NSV4 1193 aa18.25■□□□□ 0.51
LINC01116-202ENST00000339037 COL20A1Q9P218 1284 aa18.25■□□□□ 0.51
LINC01116-202ENST00000339037 MTCH2Q9Y6C9 303 aa18.25■□□□□ 0.51
LINC01116-202ENST00000339037 B4E1Z4 1266 aa18.24■□□□□ 0.51
LINC01116-202ENST00000339037 RFXAPO00287 272 aa18.24■□□□□ 0.51
LINC01116-202ENST00000339037 POU3F3P20264 500 aaPredicted RBP18.24■□□□□ 0.51
LINC01116-202ENST00000339037 KCNJ6P48051 423 aa18.24■□□□□ 0.51
LINC01116-202ENST00000339037 TFF2Q03403 129 aa18.24■□□□□ 0.51
LINC01116-202ENST00000339037 TAP1Q03518 808 aa18.24■□□□□ 0.51
LINC01116-202ENST00000339037 QRICH1Q2TAL8 776 aa18.24■□□□□ 0.51
LINC01116-202ENST00000339037 GDF6Q6KF10 455 aaPredicted RBP18.24■□□□□ 0.51
LINC01116-202ENST00000339037 B4GALNT3Q6L9W6 998 aa18.24■□□□□ 0.51
LINC01116-202ENST00000339037 SESTD1Q86VW0 696 aa18.24■□□□□ 0.51
LINC01116-202ENST00000339037 SMC5Q8IY18 1101 aa18.24■□□□□ 0.51
LINC01116-202ENST00000339037 ENAHQ8N8S7 591 aaPredicted RBP18.24■□□□□ 0.51
LINC01116-202ENST00000339037 ARNTL2Q8WYA1 636 aa18.24■□□□□ 0.51
LINC01116-202ENST00000339037 ANKS1AQ92625 1134 aa18.24■□□□□ 0.51
LINC01116-202ENST00000339037 MRPL11Q9Y3B7 192 aaKnown RBP18.24■□□□□ 0.51
LINC01116-202ENST00000339037 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.23■□□□□ 0.51
LINC01116-202ENST00000339037 EPOPA6NHQ4 379 aa18.23■□□□□ 0.51
LINC01116-202ENST00000339037 PARP1P09874 1014 aaKnown RBP18.23■□□□□ 0.51
LINC01116-202ENST00000339037 CASTP20810 708 aaKnown RBP18.23■□□□□ 0.51
LINC01116-202ENST00000339037 COL9A1P20849 921 aa18.23■□□□□ 0.51
LINC01116-202ENST00000339037 AAMPQ13685 434 aa18.23■□□□□ 0.51
LINC01116-202ENST00000339037 DGKDQ16760 1214 aa18.23■□□□□ 0.51
LINC01116-202ENST00000339037 ARHGEF16Q5VV41 709 aa18.23■□□□□ 0.51
LINC01116-202ENST00000339037 FBXO11Q86XK2 927 aa18.23■□□□□ 0.51
LINC01116-202ENST00000339037 EXOC6Q8TAG9 804 aa18.23■□□□□ 0.51
LINC01116-202ENST00000339037 KAT2BQ92831 832 aa18.23■□□□□ 0.51
LINC01116-202ENST00000339037 ZFP91Q96JP5 570 aaPredicted RBP18.23■□□□□ 0.51
LINC01116-202ENST00000339037 CTAGE1Q96RT6 745 aa18.23■□□□□ 0.51
LINC01116-202ENST00000339037 TET1Q8NFU7 2136 aa18.23■□□□□ 0.51
LINC01116-202ENST00000339037 HIP1O00291 1037 aa18.22■□□□□ 0.51
LINC01116-202ENST00000339037 TLL1O43897 1013 aa18.22■□□□□ 0.51
LINC01116-202ENST00000339037 ARHGEF15O94989 841 aa18.22■□□□□ 0.51
LINC01116-202ENST00000339037 SELPP16109 830 aa18.22■□□□□ 0.51
LINC01116-202ENST00000339037 EIF2AK2P19525 551 aaKnown RBP18.22■□□□□ 0.51
LINC01116-202ENST00000339037 IMMTQ16891 758 aaKnown RBP18.22■□□□□ 0.51
LINC01116-202ENST00000339037 LRRC8DQ7L1W4 858 aa18.22■□□□□ 0.51
LINC01116-202ENST00000339037 CHD1LQ86WJ1 897 aa18.22■□□□□ 0.51
LINC01116-202ENST00000339037 PLEKHM2Q8IWE5 1019 aa18.22■□□□□ 0.51
LINC01116-202ENST00000339037 C7orf31Q8N865 590 aa18.22■□□□□ 0.51
LINC01116-202ENST00000339037 UBAC1Q9BSL1 405 aa18.22■□□□□ 0.51
LINC01116-202ENST00000339037 RWDD1Q9H446 243 aaPredicted RBP18.22■□□□□ 0.51
LINC01116-202ENST00000339037 OSBPL3Q9H4L5 887 aa18.22■□□□□ 0.51
LINC01116-202ENST00000339037 JMJD4Q9H9V9 463 aa18.22■□□□□ 0.51
LINC01116-202ENST00000339037 MRVI1Q9Y6F6 885 aa18.22■□□□□ 0.51
LINC01116-202ENST00000339037 EIF3JO75822 258 aaKnown RBP18.21■□□□□ 0.51
LINC01116-202ENST00000339037 PARNO95453 639 aaKnown RBP18.21■□□□□ 0.51
LINC01116-202ENST00000339037 IGHDP01880 384 aa18.21■□□□□ 0.51
LINC01116-202ENST00000339037 BMP1P13497 986 aa18.21■□□□□ 0.51
LINC01116-202ENST00000339037 WDR5P61964 334 aaKnown RBP18.21■□□□□ 0.51
LINC01116-202ENST00000339037 DHX38Q92620 1227 aaKnown RBP18.21■□□□□ 0.51
LINC01116-202ENST00000339037 EMID1Q96A84 441 aaPredicted RBP18.21■□□□□ 0.51
LINC01116-202ENST00000339037 NECAB3Q96P71 396 aaPredicted RBP18.21■□□□□ 0.51
LINC01116-202ENST00000339037 DSCC1Q9BVC3 393 aa18.21■□□□□ 0.51
LINC01116-202ENST00000339037 KATNAL1Q9BW62 490 aa18.21■□□□□ 0.51
LINC01116-202ENST00000339037 KRT23Q9C075 422 aa18.21■□□□□ 0.51
LINC01116-202ENST00000339037 VAT1LQ9HCJ6 419 aa18.21■□□□□ 0.51
LINC01116-202ENST00000339037 PXMP2Q9NR77 195 aa18.21■□□□□ 0.51
LINC01116-202ENST00000339037 ZSWIM5Q9P217 1185 aa18.21■□□□□ 0.51
LINC01116-202ENST00000339037 GTF2IRD1Q9UHL9 959 aa18.21■□□□□ 0.51
LINC01116-202ENST00000339037 DDX41Q9UJV9 622 aaKnown RBP18.21■□□□□ 0.51
LINC01116-202ENST00000339037 MYH6P13533 1939 aa18.21■□□□□ 0.51
LINC01116-202ENST00000339037 CFBP00751 764 aa18.2■□□□□ 0.5
LINC01116-202ENST00000339037 NR3C2P08235 984 aa18.2■□□□□ 0.5
LINC01116-202ENST00000339037 KCNQ1P51787 676 aa18.2■□□□□ 0.5
LINC01116-202ENST00000339037 NUCB1Q02818 461 aa18.2■□□□□ 0.5
LINC01116-202ENST00000339037 RBL2Q08999 1139 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms