RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 CCDC138Q96M89 665 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 SLC30A1Q9Y6M5 507 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 CDK13Q14004 1512 aaKnown RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 GFPT2O94808 682 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 ASMTLO95671 621 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 PRLRP16471 622 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 KRT2P35908 639 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 LIFRP42702 1097 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 MSH2P43246 934 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 RAD23BP54727 409 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 HPCAP84074 193 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 NEPROQ6NW34 567 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 C8orf74Q6P047 294 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 CNTROBQ8N137 903 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 DDHD1Q8NEL9 900 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 DDI1Q8WTU0 396 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 INPP5DQ92835 1189 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 OTUD5Q96G74 571 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 CEP19Q96LK0 163 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 IMPG2Q9BZV3 1241 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 VPS16Q9H269 839 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 CAAP1Q9H8G2 361 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 KLHL14Q9P2G3 628 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 TRIM35Q9UPQ4 493 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 L3MBTL1Q9Y468 752 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 DYTNA2CJ06 578 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 AKR1B10O60218 316 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 SERPINB3P29508 390 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 CDK7P50613 346 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 OLR1P78380 273 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 CUL1Q13616 776 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 FYB2Q5VWT5 728 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 TWF2Q6IBS0 349 aaKnown RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 CCDC62Q6P9F0 684 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 RASGRP2Q7LDG7 609 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 TOR1AIP2Q8NFQ8 470 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 TRIM63Q969Q1 353 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 RNPEPL1Q9HAU8 725 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 CLK4Q9HAZ1 481 aaKnown RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 MOV10Q9HCE1 1003 aaKnown RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 CYP39A1Q9NYL5 469 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 GPC6Q9Y625 555 aaPredicted RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 NRXN1Q9ULB1 1477 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 STAMBPO95630 424 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 PTPN2P17706 415 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 CETN2P41208 172 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 MXI1P50539 228 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 AK2P54819 239 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 CLUL1Q15846 466 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 PAPD7Q5XG87 772 aaKnown RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 ANO7Q6IWH7 933 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 ANKRD13DQ6ZTN6 518 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 ENDOVQ8N8Q3 282 aaKnown RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 PRPF18Q99633 342 aaKnown RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 PASKQ96RG2 1323 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 POGZQ7Z3K3 1410 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 KMOO15229 486 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 RNMTO43148 476 aaKnown RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 ENDOUP21128 410 aaKnown RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 ME1P48163 572 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 PDE1AP54750 535 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 CDK17Q00537 523 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 MCL1Q07820 350 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 KARSQ15046 597 aaKnown RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 LIN52Q52LA3 116 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 NEK10Q6ZWH5 1172 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 SLC7A5P1Q8MH63 180 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 RASSF5Q8WWW0 418 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 C8orf76Q96K31 380 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 RNPC3Q96LT9 517 aaKnown RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 UBE2OQ9C0C9 1292 aaKnown RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 NDEL1Q9GZM8 345 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 EPC1Q9H2F5 836 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 PPANQ9NQ55 473 aaKnown RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 SAMSN1Q9NSI8 373 aaKnown RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 EPS15L1Q9UBC2 864 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 ATPIF1Q9UII2 106 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 ZNF711Q9Y462 761 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 HYOU1Q9Y4L1 999 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 PCDHB2Q9Y5E7 798 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 ABCC4O15439 1325 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 MROH7Q68CQ1 1323 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 DAPK1P53355 1430 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 CARMIL2Q6F5E8 1435 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 GLRX3O76003 335 aaKnown RBP4.51□□□□□ -1.69
NEDD4-201ENST00000338963 COPS2P61201 443 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 FXNQ16595 210 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 SPDYAQ5MJ70 313 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 TCERG1LQ5VWI1 586 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 FAM228AQ86W67 206 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 NUP93Q8N1F7 819 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 CLASRPQ8N2M8 674 aaKnown RBP4.51□□□□□ -1.69
NEDD4-201ENST00000338963 LZTFL1Q9NQ48 299 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 EFCAB6Q5THR3 1501 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 NUP155O75694 1391 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 PLEKHG1Q9ULL1 1385 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 GRID2IPA4D2P6 1211 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 XPOTO43592 962 aaKnown RBP4.51□□□□□ -1.69
NEDD4-201ENST00000338963 ORC4O43929 436 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 CSB-PGBD3P0DP91 1061 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms