RNA–Protein interactions for RNA: ENST00000338790.4

TBC1D3P4-201, Transcript of TBC1 domain family member 3 pseudogene 4, humanhuman

BASIC

Gene TBC1D3P4, Length 1,075 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3P4-201ENST00000338790 GNAT2P19087 354 aa12.24□□□□□ -0.45
TBC1D3P4-201ENST00000338790 RFC2P35250 354 aa12.24□□□□□ -0.45
TBC1D3P4-201ENST00000338790 KCNQ1P51787 676 aa12.24□□□□□ -0.45
TBC1D3P4-201ENST00000338790 SLFN13Q68D06 897 aa12.24□□□□□ -0.45
TBC1D3P4-201ENST00000338790 TAPT1Q6NXT6 567 aa12.24□□□□□ -0.45
TBC1D3P4-201ENST00000338790 SIRT2Q8IXJ6 389 aa12.24□□□□□ -0.45
TBC1D3P4-201ENST00000338790 LRRC47Q8N1G4 583 aaKnown RBP12.24□□□□□ -0.45
TBC1D3P4-201ENST00000338790 PHOSPHO2Q8TCD6 241 aa12.24□□□□□ -0.45
TBC1D3P4-201ENST00000338790 SCLYQ96I15 445 aa12.24□□□□□ -0.45
TBC1D3P4-201ENST00000338790 GMCL1Q96IK5 515 aa12.24□□□□□ -0.45
TBC1D3P4-201ENST00000338790 SLC9A7Q96T83 725 aa12.24□□□□□ -0.45
TBC1D3P4-201ENST00000338790 POLR3EQ9NVU0 708 aa12.24□□□□□ -0.45
TBC1D3P4-201ENST00000338790 TANC1Q9C0D5 1861 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 ZNF536O15090 1300 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 TNKSO95271 1327 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 LOC102724159A0A0B4J2E5 919 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 S1PR4O95977 384 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 ADH1BP00325 375 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 PSMC6P62333 389 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 TTLL4Q14679 1199 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 PWP2Q15269 919 aaKnown RBP12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 DUSP28Q4G0W2 176 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 TMEM31Q5JXX7 168 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 STK11IPQ8N1F8 1099 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 NEDD1Q8NHV4 660 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 MORC4Q8TE76 937 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 STAG1Q8WVM7 1258 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 TRERF1Q96PN7 1200 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 LRFN3Q9BTN0 628 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 BCL11AQ9H165 835 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 CYP39A1Q9NYL5 469 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 TET1Q8NFU7 2136 aa12.23□□□□□ -0.45
TBC1D3P4-201ENST00000338790 KIF28PB7ZC32 967 aa12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 PRDM1O75626 825 aa12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 ZFYP08048 801 aaPredicted RBP12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 TSPY3P0CV98 308 aa12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 TSPY8P0CW00 308 aa12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 ALAS1P13196 640 aa12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 SLC1A4P43007 532 aa12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 TDO2P48775 406 aa12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 CPT1AP50416 773 aa12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 PDE4BQ07343 736 aa12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 IKQ13123 557 aaPredicted RBP12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 FBXO16Q8IX29 292 aaPredicted RBP12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 KBTBD3Q8NAB2 608 aa12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 APPBP2Q92624 585 aa12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 OSBP2Q969R2 916 aa12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 CHMP4BQ9H444 224 aaKnown RBP12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 EPB41L4AQ9HCS5 686 aaPredicted RBP12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 PDGFCQ9NRA1 345 aa12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 ZBTB40Q9NUA8 1239 aa12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 TRMT13Q9NUP7 481 aaKnown RBP12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 ISY1Q9ULR0 285 aaKnown RBP12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 DDX19BQ9UMR2 479 aa12.22□□□□□ -0.45
TBC1D3P4-201ENST00000338790 GPR37L1O60883 481 aa12.21□□□□□ -0.45
TBC1D3P4-201ENST00000338790 SLC3A2P08195 630 aaKnown RBP12.21□□□□□ -0.45
TBC1D3P4-201ENST00000338790 CYP2C9P11712 490 aa12.21□□□□□ -0.45
TBC1D3P4-201ENST00000338790 USP46P62068 366 aa12.21□□□□□ -0.45
TBC1D3P4-201ENST00000338790 PURAQ00577 322 aaKnown RBP12.21□□□□□ -0.45
TBC1D3P4-201ENST00000338790 BRDTQ58F21 947 aaPredicted RBP12.21□□□□□ -0.45
TBC1D3P4-201ENST00000338790 BRICD5Q6PL45 260 aa12.21□□□□□ -0.45
TBC1D3P4-201ENST00000338790 KIAA1211Q6ZU35 1233 aa12.21□□□□□ -0.45
TBC1D3P4-201ENST00000338790 DEFB128Q7Z7B8 93 aa12.21□□□□□ -0.45
TBC1D3P4-201ENST00000338790 SPSB2Q99619 263 aa12.21□□□□□ -0.45
TBC1D3P4-201ENST00000338790 LRRCC1Q9C099 1032 aa12.21□□□□□ -0.45
TBC1D3P4-201ENST00000338790 EPHX3Q9H6B9 360 aa12.21□□□□□ -0.45
TBC1D3P4-201ENST00000338790 ADD3Q9UEY8 706 aaKnown RBP12.21□□□□□ -0.45
TBC1D3P4-201ENST00000338790 TRIP12Q14669 1992 aaPredicted RBP12.21□□□□□ -0.46
TBC1D3P4-201ENST00000338790 EPOPA6NHQ4 379 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 RFXAPO00287 272 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 RNF113AO15541 343 aaKnown RBP12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 GPAA1O43292 621 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 BAIAP3O94812 1187 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 APPP05067 770 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 NDUFV2P19404 249 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 PTGS1P23219 599 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 TAP1Q03518 808 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 RCSD1Q6JBY9 416 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 NFRKBQ6P4R8 1299 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 EEPD1Q7L9B9 569 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 HERC6Q8IVU3 1022 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 FAM160A2Q8N612 972 aaPredicted RBP12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 RETREG2Q8NC44 543 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 ARNTL2Q8WYA1 636 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 MTG1Q9BT17 334 aaPredicted RBP12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 WDR11Q9BZH6 1224 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 NACAP1Q9BZK3 213 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 CERS4Q9HA82 394 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 PRDM9Q9NQV7 894 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 ECHDC1Q9NTX5 307 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 PCDHGC3Q9UN70 934 aa12.2□□□□□ -0.46
TBC1D3P4-201ENST00000338790 COL4A4P53420 1690 aaPredicted RBP12.19□□□□□ -0.46
TBC1D3P4-201ENST00000338790 RAD50Q92878 1312 aa12.19□□□□□ -0.46
TBC1D3P4-201ENST00000338790 WDFY4Q6ZS81 3184 aa12.19□□□□□ -0.46
TBC1D3P4-201ENST00000338790 RBM47A0AV96 593 aaKnown RBP12.19□□□□□ -0.46
TBC1D3P4-201ENST00000338790 PATL2C9JE40 543 aaKnown RBP12.19□□□□□ -0.46
TBC1D3P4-201ENST00000338790 RNF223E7ERA6 249 aa12.19□□□□□ -0.46
TBC1D3P4-201ENST00000338790 KPNA6O60684 536 aa12.19□□□□□ -0.46
TBC1D3P4-201ENST00000338790 MCCP23508 829 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms