RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 CYR61O00622 381 aa4.56□□□□□ -1.68
XRCC4-202ENST00000338635 B4GALT3O60512 393 aa4.56□□□□□ -1.68
XRCC4-202ENST00000338635 ICAM4Q14773 271 aa4.56□□□□□ -1.68
XRCC4-202ENST00000338635 CRIP3Q6Q6R5 217 aa4.56□□□□□ -1.68
XRCC4-202ENST00000338635 MILR1Q7Z6M3 343 aa4.56□□□□□ -1.68
XRCC4-202ENST00000338635 SEC14L1Q92503 715 aa4.56□□□□□ -1.68
XRCC4-202ENST00000338635 MMP19Q99542 508 aa4.56□□□□□ -1.68
XRCC4-202ENST00000338635 KLC2Q9H0B6 622 aa4.56□□□□□ -1.68
XRCC4-202ENST00000338635 GZF1Q9H116 711 aaPredicted RBP4.56□□□□□ -1.68
XRCC4-202ENST00000338635 BTG4Q9NY30 223 aa4.56□□□□□ -1.68
XRCC4-202ENST00000338635 AKT3Q9Y243 479 aa4.56□□□□□ -1.68
XRCC4-202ENST00000338635 C9orf118A6NHY6 69 aa4.55□□□□□ -1.68
XRCC4-202ENST00000338635 C22orf46C9J442 243 aa4.55□□□□□ -1.68
XRCC4-202ENST00000338635 CYP1A1P04798 512 aaPredicted RBP4.55□□□□□ -1.68
XRCC4-202ENST00000338635 THBDP07204 575 aa4.55□□□□□ -1.68
XRCC4-202ENST00000338635 STAT5AP42229 794 aa4.55□□□□□ -1.68
XRCC4-202ENST00000338635 PRAMEF18Q5VWM3 479 aa4.55□□□□□ -1.68
XRCC4-202ENST00000338635 TEX2Q8IWB9 1127 aa4.55□□□□□ -1.68
XRCC4-202ENST00000338635 COPS5Q92905 334 aa4.55□□□□□ -1.68
XRCC4-202ENST00000338635 CDK5RAP1Q96SZ6 601 aaKnown RBP4.55□□□□□ -1.68
XRCC4-202ENST00000338635 GINM1Q9NU53 330 aa4.55□□□□□ -1.68
XRCC4-202ENST00000338635 FZD7O75084 574 aa4.54□□□□□ -1.68
XRCC4-202ENST00000338635 KCNH1O95259 989 aa4.54□□□□□ -1.68
XRCC4-202ENST00000338635 AMHP03971 560 aa4.54□□□□□ -1.68
XRCC4-202ENST00000338635 IL13P35225 146 aa4.54□□□□□ -1.68
XRCC4-202ENST00000338635 EIF6P56537 245 aaKnown RBP4.54□□□□□ -1.68
XRCC4-202ENST00000338635 RACK1P63244 317 aaKnown RBP4.54□□□□□ -1.68
XRCC4-202ENST00000338635 COL9A2Q14055 689 aaPredicted RBP4.54□□□□□ -1.68
XRCC4-202ENST00000338635 CR1LQ2VPA4 569 aa4.54□□□□□ -1.68
XRCC4-202ENST00000338635 FAM126BQ8IXS8 530 aa4.54□□□□□ -1.68
XRCC4-202ENST00000338635 ZNF513Q8N8E2 541 aaPredicted RBP4.54□□□□□ -1.68
XRCC4-202ENST00000338635 KLHL6Q8WZ60 621 aa4.54□□□□□ -1.68
XRCC4-202ENST00000338635 ZNF747Q9BV97 191 aa4.54□□□□□ -1.68
XRCC4-202ENST00000338635 DEF6Q9H4E7 631 aa4.54□□□□□ -1.68
XRCC4-202ENST00000338635 CD248Q9HCU0 757 aa4.54□□□□□ -1.68
XRCC4-202ENST00000338635 NGRNQ9NPE2 291 aaKnown RBP4.54□□□□□ -1.68
XRCC4-202ENST00000338635 NKX3-2P78367 333 aa4.53□□□□□ -1.68
XRCC4-202ENST00000338635 FANCCQ00597 558 aa4.53□□□□□ -1.68
XRCC4-202ENST00000338635 SCRN1Q12765 414 aa4.53□□□□□ -1.68
XRCC4-202ENST00000338635 ADAM9Q13443 819 aa4.53□□□□□ -1.68
XRCC4-202ENST00000338635 INF2Q27J81 1249 aa4.53□□□□□ -1.68
XRCC4-202ENST00000338635 USP51Q70EK9 711 aa4.53□□□□□ -1.68
XRCC4-202ENST00000338635 PLEKHH3Q7Z736 793 aa4.53□□□□□ -1.68
XRCC4-202ENST00000338635 C19orf47Q8N9M1 422 aaKnown RBP4.53□□□□□ -1.68
XRCC4-202ENST00000338635 BACH2Q9BYV9 841 aa4.53□□□□□ -1.68
XRCC4-202ENST00000338635 VPS11Q9H270 941 aa4.53□□□□□ -1.68
XRCC4-202ENST00000338635 DDX41Q9UJV9 622 aaKnown RBP4.53□□□□□ -1.68
XRCC4-202ENST00000338635 ANKRD34BA5PLL1 514 aa4.53□□□□□ -1.69
XRCC4-202ENST00000338635 GPR42O15529 346 aa4.53□□□□□ -1.69
XRCC4-202ENST00000338635 ZNF28P17035 718 aa4.53□□□□□ -1.69
XRCC4-202ENST00000338635 SLC6A11P48066 632 aa4.53□□□□□ -1.69
XRCC4-202ENST00000338635 GIPRP48546 466 aa4.53□□□□□ -1.69
XRCC4-202ENST00000338635 PPP2CBP62714 309 aa4.53□□□□□ -1.69
XRCC4-202ENST00000338635 PPP2CAP67775 309 aa4.53□□□□□ -1.69
XRCC4-202ENST00000338635 PPP2R5EQ16537 467 aa4.53□□□□□ -1.69
XRCC4-202ENST00000338635 KIAA1211LQ6NV74 962 aa4.53□□□□□ -1.69
XRCC4-202ENST00000338635 ZNF585AQ6P3V2 769 aa4.53□□□□□ -1.69
XRCC4-202ENST00000338635 CIR1Q86X95 450 aaPredicted RBP4.53□□□□□ -1.69
XRCC4-202ENST00000338635 TMEM168Q9H0V1 697 aa4.53□□□□□ -1.69
XRCC4-202ENST00000338635 L2HGDHQ9H9P8 463 aa4.53□□□□□ -1.69
XRCC4-202ENST00000338635 EFR3BQ9Y2G0 817 aa4.53□□□□□ -1.69
XRCC4-202ENST00000338635 EMC9Q9Y3B6 208 aa4.53□□□□□ -1.69
XRCC4-202ENST00000338635 FPR2P25090 351 aa4.52□□□□□ -1.69
XRCC4-202ENST00000338635 CEP68Q76N32 757 aa4.52□□□□□ -1.69
XRCC4-202ENST00000338635 PALM2Q8IXS6 379 aa4.52□□□□□ -1.69
XRCC4-202ENST00000338635 BVESQ8NE79 360 aa4.52□□□□□ -1.69
XRCC4-202ENST00000338635 DNERQ8NFT8 737 aa4.52□□□□□ -1.69
XRCC4-202ENST00000338635 OR6P1Q8NGX9 317 aa4.52□□□□□ -1.69
XRCC4-202ENST00000338635 IGDCC4Q8TDY8 1250 aa4.52□□□□□ -1.69
XRCC4-202ENST00000338635 MBD6Q96DN6 1003 aa4.52□□□□□ -1.69
XRCC4-202ENST00000338635 YTHDC1Q96MU7 727 aaKnown RBP4.52□□□□□ -1.69
XRCC4-202ENST00000338635 APBA2Q99767 749 aa4.52□□□□□ -1.69
XRCC4-202ENST00000338635 YIPF4Q9BSR8 244 aa4.52□□□□□ -1.69
XRCC4-202ENST00000338635 JADE2Q9NQC1 790 aa4.52□□□□□ -1.69
XRCC4-202ENST00000338635 METTL5Q9NRN9 209 aaKnown RBP4.52□□□□□ -1.69
XRCC4-202ENST00000338635 APEX2Q9UBZ4 518 aa4.52□□□□□ -1.69
XRCC4-202ENST00000338635 TIMM13Q9Y5L4 95 aaPredicted RBP4.52□□□□□ -1.69
XRCC4-202ENST00000338635 HS3ST3A1Q9Y663 406 aa4.52□□□□□ -1.69
XRCC4-202ENST00000338635 SOX9P48436 509 aa4.51□□□□□ -1.69
XRCC4-202ENST00000338635 MLLT6P55198 1093 aaPredicted RBP4.51□□□□□ -1.69
XRCC4-202ENST00000338635 PAK2Q13177 524 aa4.51□□□□□ -1.69
XRCC4-202ENST00000338635 MROH9Q5TGP6 573 aa4.51□□□□□ -1.69
XRCC4-202ENST00000338635 IQCEQ6IPM2 695 aa4.51□□□□□ -1.69
XRCC4-202ENST00000338635 POMZP3Q6PJE2 187 aa4.51□□□□□ -1.69
XRCC4-202ENST00000338635 ARHGEF18Q6ZSZ5 1173 aa4.51□□□□□ -1.69
XRCC4-202ENST00000338635 RIOX2Q8IUF8 465 aa4.51□□□□□ -1.69
XRCC4-202ENST00000338635 KBTBD2Q8IY47 623 aa4.51□□□□□ -1.69
XRCC4-202ENST00000338635 TRMT2BQ96GJ1 504 aaKnown RBP4.51□□□□□ -1.69
XRCC4-202ENST00000338635 CYP26B1Q9NR63 512 aa4.51□□□□□ -1.69
XRCC4-202ENST00000338635 NOP56O00567 594 aaKnown RBP4.5□□□□□ -1.69
XRCC4-202ENST00000338635 B4GALT4O60513 344 aa4.5□□□□□ -1.69
XRCC4-202ENST00000338635 EPHB4P54760 987 aa4.5□□□□□ -1.69
XRCC4-202ENST00000338635 RPL11P62913 178 aaKnown RBP4.5□□□□□ -1.69
XRCC4-202ENST00000338635 PKN3Q6P5Z2 889 aa4.5□□□□□ -1.69
XRCC4-202ENST00000338635 CRACR2BQ8N4Y2 399 aaPredicted RBP4.5□□□□□ -1.69
XRCC4-202ENST00000338635 FRS2Q8WU20 508 aa4.5□□□□□ -1.69
XRCC4-202ENST00000338635 TOE1Q96GM8 510 aaKnown RBP4.5□□□□□ -1.69
XRCC4-202ENST00000338635 ZSWIM3Q96MP5 696 aa4.5□□□□□ -1.69
XRCC4-202ENST00000338635 CLIC6Q96NY7 704 aa4.5□□□□□ -1.69
XRCC4-202ENST00000338635 PTPN18Q99952 460 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms