RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 GPKOWQ92917 476 aaPredicted RBP eCLIP13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 RNF26Q9BY78 433 aaPredicted RBP13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 BARHL2Q9NY43 387 aa13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 PRKAG2Q9UGJ0 569 aa13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 MRVI1Q9Y6F6 885 aa13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 ELP1O95163 1332 aa13□□□□□ -0.33
SLC28A1-202ENST00000338602 A0A1W2PQ45 241 aaPredicted RBP13□□□□□ -0.33
SLC28A1-202ENST00000338602 A0A1W2PQY0 241 aa13□□□□□ -0.33
SLC28A1-202ENST00000338602 ADCY6O43306 1168 aa13□□□□□ -0.33
SLC28A1-202ENST00000338602 KPNA6O60684 536 aa13□□□□□ -0.33
SLC28A1-202ENST00000338602 CDKL5O76039 1030 aa13□□□□□ -0.33
SLC28A1-202ENST00000338602 SEC24BO95487 1268 aa13□□□□□ -0.33
SLC28A1-202ENST00000338602 ASGR1P07306 291 aa13□□□□□ -0.33
SLC28A1-202ENST00000338602 SCG2P13521 617 aa13□□□□□ -0.33
SLC28A1-202ENST00000338602 IFNAR1P17181 557 aa13□□□□□ -0.33
SLC28A1-202ENST00000338602 ADCY7P51828 1080 aa13□□□□□ -0.33
SLC28A1-202ENST00000338602 SSRP1Q08945 709 aaKnown RBP13□□□□□ -0.33
SLC28A1-202ENST00000338602 PFKFB3Q16875 520 aaPredicted RBP13□□□□□ -0.33
SLC28A1-202ENST00000338602 LRRC26Q2I0M4 334 aa13□□□□□ -0.33
SLC28A1-202ENST00000338602 C1orf53Q5VUE5 145 aa13□□□□□ -0.33
SLC28A1-202ENST00000338602 WWC2Q6AWC2 1192 aa13□□□□□ -0.33
SLC28A1-202ENST00000338602 MCTP2Q6DN12 878 aa13□□□□□ -0.33
SLC28A1-202ENST00000338602 USP17L6PQ6QN14 398 aa13□□□□□ -0.33
SLC28A1-202ENST00000338602 IL17RAQ96F46 866 aa13□□□□□ -0.33
SLC28A1-202ENST00000338602 POLR3EQ9NVU0 708 aa13□□□□□ -0.33
SLC28A1-202ENST00000338602 LCTP09848 1927 aa13□□□□□ -0.33
SLC28A1-202ENST00000338602 SMCO2A6NFE2 343 aa12.99□□□□□ -0.33
SLC28A1-202ENST00000338602 MEIS2O14770 477 aa12.99□□□□□ -0.33
SLC28A1-202ENST00000338602 FOSP01100 380 aaPredicted RBP12.99□□□□□ -0.33
SLC28A1-202ENST00000338602 GH1P01241 217 aa12.99□□□□□ -0.33
SLC28A1-202ENST00000338602 TGFB3P10600 412 aa12.99□□□□□ -0.33
SLC28A1-202ENST00000338602 RTP1P59025 263 aa12.99□□□□□ -0.33
SLC28A1-202ENST00000338602 BEX3Q00994 111 aa12.99□□□□□ -0.33
SLC28A1-202ENST00000338602 C8orf34Q49A92 452 aa12.99□□□□□ -0.33
SLC28A1-202ENST00000338602 CCSAPQ6IQ19 270 aaPredicted RBP12.99□□□□□ -0.33
SLC28A1-202ENST00000338602 NLRX1Q86UT6 975 aa12.99□□□□□ -0.33
SLC28A1-202ENST00000338602 CCDC148Q8NFR7 591 aa12.99□□□□□ -0.33
SLC28A1-202ENST00000338602 SLC26A6Q9BXS9 759 aa12.99□□□□□ -0.33
SLC28A1-202ENST00000338602 SEZ6LQ9BYH1 1024 aa12.99□□□□□ -0.33
SLC28A1-202ENST00000338602 SLKQ9H2G2 1235 aaPredicted RBP12.99□□□□□ -0.33
SLC28A1-202ENST00000338602 C6orf50Q9HD87 102 aa12.99□□□□□ -0.33
SLC28A1-202ENST00000338602 RIC8AQ9NPQ8 531 aa12.99□□□□□ -0.33
SLC28A1-202ENST00000338602 ATP11BQ9Y2G3 1177 aa12.99□□□□□ -0.33
SLC28A1-202ENST00000338602 FRMPD4Q14CM0 1322 aa12.98□□□□□ -0.33
SLC28A1-202ENST00000338602 MROH7Q68CQ1 1323 aa12.98□□□□□ -0.33
SLC28A1-202ENST00000338602 A0A0U1RQG5 324 aaPredicted RBP12.98□□□□□ -0.33
SLC28A1-202ENST00000338602 MYADML2A6NDP7 307 aa12.98□□□□□ -0.33
SLC28A1-202ENST00000338602 STXBP3O00186 592 aa12.98□□□□□ -0.33
SLC28A1-202ENST00000338602 GNA11P29992 359 aa12.98□□□□□ -0.33
SLC28A1-202ENST00000338602 NEK4P51957 841 aa12.98□□□□□ -0.33
SLC28A1-202ENST00000338602 STK3Q13188 491 aa12.98□□□□□ -0.33
SLC28A1-202ENST00000338602 LAMC2Q13753 1193 aa12.98□□□□□ -0.33
SLC28A1-202ENST00000338602 PCNX4Q63HM2 1172 aa12.98□□□□□ -0.33
SLC28A1-202ENST00000338602 CCDC62Q6P9F0 684 aa12.98□□□□□ -0.33
SLC28A1-202ENST00000338602 BICD2Q8TD16 824 aa12.98□□□□□ -0.33
SLC28A1-202ENST00000338602 PHKBQ93100 1093 aa12.98□□□□□ -0.33
SLC28A1-202ENST00000338602 NCOA5Q9HCD5 579 aaKnown RBP12.98□□□□□ -0.33
SLC28A1-202ENST00000338602 DCDC2CA8MYV0 355 aa12.97□□□□□ -0.33
SLC28A1-202ENST00000338602 AK2P54819 239 aa12.97□□□□□ -0.33
SLC28A1-202ENST00000338602 AP3B2Q13367 1082 aa12.97□□□□□ -0.33
SLC28A1-202ENST00000338602 SNX17Q15036 470 aa12.97□□□□□ -0.33
SLC28A1-202ENST00000338602 NTRK3Q16288 839 aa12.97□□□□□ -0.33
SLC28A1-202ENST00000338602 UBE2SQ16763 222 aa12.97□□□□□ -0.33
SLC28A1-202ENST00000338602 LY6KQ17RY6 165 aa12.97□□□□□ -0.33
SLC28A1-202ENST00000338602 CXCL17Q6UXB2 119 aa12.97□□□□□ -0.33
SLC28A1-202ENST00000338602 DHX37Q8IY37 1157 aaKnown RBP12.97□□□□□ -0.33
SLC28A1-202ENST00000338602 CDHR1Q96JP9 859 aa12.97□□□□□ -0.33
SLC28A1-202ENST00000338602 LARP6Q9BRS8 491 aaKnown RBP12.97□□□□□ -0.33
SLC28A1-202ENST00000338602 C22orf23Q9BZE7 217 aa12.97□□□□□ -0.33
SLC28A1-202ENST00000338602 DDX41Q9UJV9 622 aaKnown RBP12.97□□□□□ -0.33
SLC28A1-202ENST00000338602 PCDHA6Q9UN73 950 aa12.97□□□□□ -0.33
SLC28A1-202ENST00000338602 PCDHA8Q9Y5H6 950 aa12.97□□□□□ -0.33
SLC28A1-202ENST00000338602 LRRC37A2A6NM11 1700 aa12.97□□□□□ -0.33
SLC28A1-202ENST00000338602 ESYT2A0FGR8 921 aa12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 A6NJR5 290 aa12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 CTAGE5O15320 804 aa12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 TLR3O15455 904 aaKnown RBP12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 FIBPO43427 364 aa12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 DEXIO95424 95 aa12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 MYL3P08590 195 aa12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 XBP1P17861 261 aa12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 IRX5P78411 483 aaPredicted RBP12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 TLE2Q04725 743 aa12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 TRIM60Q495X7 471 aa12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 TMEM63BQ5T3F8 832 aa12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 GIMAP8Q8ND71 665 aaPredicted RBP12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 IL31RAQ8NI17 732 aa12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 LBHD1Q9BQE6 289 aaPredicted RBP12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 MTG1Q9BT17 334 aaPredicted RBP12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 MLXIPQ9HAP2 919 aa12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 SH3GLB2Q9NR46 395 aa12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 RTEL1Q9NZ71 1219 aa12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 ZMYND8Q9ULU4 1186 aaPredicted RBP12.96□□□□□ -0.33
SLC28A1-202ENST00000338602 ARVCFO00192 962 aa12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 PFKFB2O60825 505 aa12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 PQBP1O60828 265 aaKnown RBP12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 ARIH2O95376 493 aa12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 ICAM3P32942 547 aa12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 NLRP5P59047 1200 aa12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 NEDD9Q14511 834 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms