RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 NYAP2Q9P242 653 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 CTTNBP2NLQ9P2B4 639 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 PNMA2Q9UL42 364 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 MYO3BQ8WXR4 1341 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 USP27XA6NNY8 438 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 FMR1Q06787 632 aaKnown RBP eCLIP6.93□□□□□ -1.35e-8■■■■■ 29.5
PRKDC-202ENST00000338368 STRN3Q13033 797 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 ZNF277Q9NRM2 450 aaPredicted RBP6.93□□□□□ -1.3
PRKDC-202ENST00000338368 ECM2O94769 699 aaPredicted RBP6.93□□□□□ -1.3
PRKDC-202ENST00000338368 TCP1P17987 556 aaKnown RBP6.93□□□□□ -1.3
PRKDC-202ENST00000338368 CFAP221Q4G0U5 840 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 NWD1Q149M9 1564 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 PHLPP2Q6ZVD8 1323 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 WDR44Q5JSH3 913 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 CDC42EP5Q6NZY7 148 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 FAM186BQ8IYM0 893 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 ACRBPQ8NEB7 543 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 PAGR1Q9BTK6 254 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 CAPN2P17655 700 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 KIFAP3Q92845 792 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 CALCOCO1Q9P1Z2 691 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 MTUS1Q9ULD2 1270 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 ENC1O14682 589 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 CLIC2O15247 247 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 PDHBP11177 359 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 RPS6KA1Q15418 735 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 SRGAP1Q7Z6B7 1085 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 HYOU1Q9Y4L1 999 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 KRT5P13647 590 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 PSMC2P35998 433 aaKnown RBP6.93□□□□□ -1.3
PRKDC-202ENST00000338368 SEMA3FQ13275 785 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 FAM102BQ5T8I3 360 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 JMJD4Q9H9V9 463 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 FAM217BQ9NTX9 383 aaPredicted RBP6.93□□□□□ -1.3
PRKDC-202ENST00000338368 AP5Z1O43299 807 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 ARMCX5Q6P1M9 558 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 RBM43Q6ZSC3 357 aaKnown RBP6.93□□□□□ -1.3
PRKDC-202ENST00000338368 RAD54LQ92698 747 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 TSKSQ9UJT2 592 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 RIMS1Q86UR5 1692 aaKnown RBP6.93□□□□□ -1.3
PRKDC-202ENST00000338368 ABCB4P21439 1286 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 DCAF4Q8WV16 495 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 SIGLEC1Q9BZZ2 1709 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 HOXA7P31268 230 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-202ENST00000338368 PALM3A6NDB9 673 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-202ENST00000338368 MYZAPP0CAP1 466 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 GAP43P17677 238 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 GJC1P36383 396 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 LRRC63Q05C16 580 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 ZNF543Q08ER8 600 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 PKN1Q16512 942 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 ZNF408Q9H9D4 720 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 POLLQ9UGP5 575 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 ANKRD62A6NC57 917 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 H2AFZP0C0S5 128 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 IRX3P78415 501 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-202ENST00000338368 CYP27A1Q02318 531 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 H2AFVQ71UI9 128 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 AZI2Q9H6S1 392 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 CAMTA1Q9Y6Y1 1673 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 FAM83BQ5T0W9 1011 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 COL23A1Q86Y22 540 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-202ENST00000338368 PANX2Q96RD6 677 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 SALL1Q9NSC2 1324 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 SFI1A8K8P3 1242 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 K7ENM7 598 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 ACTN4O43707 911 aaKnown RBP6.92□□□□□ -1.3
PRKDC-202ENST00000338368 EIF2AK2P19525 551 aaKnown RBP6.92□□□□□ -1.3
PRKDC-202ENST00000338368 GRIPAP1Q4V328 841 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 ZMYND12Q9H0C1 365 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 TMEM60Q9H2L4 133 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 SPOPO43791 374 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 DPYDQ12882 1025 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 MYO1AQ9UBC5 1043 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 ZHX1Q9UKY1 873 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-202ENST00000338368 RHOBTB3O94955 611 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 TOB1P50616 345 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-202ENST00000338368 ARHGAP4P98171 946 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 UTP14CQ5TAP6 766 aaKnown RBP6.92□□□□□ -1.3
PRKDC-202ENST00000338368 GBP6Q6ZN66 633 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 ADSSL1Q8N142 457 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 CCSER1Q9C0I3 900 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 KCNG1Q9UIX4 513 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 A0A1W2PQC6 194 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 HMGB1P1B2RPK0 211 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-202ENST00000338368 STXBP3O00186 592 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 MYCNP04198 464 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-202ENST00000338368 PLCB3Q01970 1234 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 BRD3Q15059 726 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 PIGOQ8TEQ8 1089 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 MYH10P35580 1976 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 GUF1Q8N442 669 aaKnown RBP6.92□□□□□ -1.3
PRKDC-202ENST00000338368 GOLGA5Q8TBA6 731 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 NHEJ1Q9H9Q4 299 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-202ENST00000338368 FAM184BQ9ULE4 1060 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 ADGRG1Q9Y653 693 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 TLDC2A0PJX2 215 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 RASSF7Q02833 373 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 NBPF11Q86T75 865 aa6.92□□□□□ -1.3
PRKDC-202ENST00000338368 CCDC26Q8TAB7 109 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms