RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 IRF6O14896 467 aa17.41■□□□□ 0.38
LIMS1-202ENST00000338045 SLC26A4O43511 780 aa17.41■□□□□ 0.38
LIMS1-202ENST00000338045 MARCH6O60337 910 aa17.41■□□□□ 0.38
LIMS1-202ENST00000338045 CASP1P29466 404 aa17.41■□□□□ 0.38
LIMS1-202ENST00000338045 GRB10Q13322 594 aa17.41■□□□□ 0.38
LIMS1-202ENST00000338045 HYIQ5T013 277 aa17.41■□□□□ 0.38
LIMS1-202ENST00000338045 LDLRAD1Q5T700 205 aa17.41■□□□□ 0.38
LIMS1-202ENST00000338045 KRT79Q5XKE5 535 aa17.41■□□□□ 0.38
LIMS1-202ENST00000338045 ARMC9Q7Z3E5 817 aa17.41■□□□□ 0.38
LIMS1-202ENST00000338045 MLKLQ8NB16 471 aa17.41■□□□□ 0.38
LIMS1-202ENST00000338045 PROCA1Q8NCQ7 364 aaPredicted RBP17.41■□□□□ 0.38
LIMS1-202ENST00000338045 GJA10Q969M2 543 aa17.41■□□□□ 0.38
LIMS1-202ENST00000338045 TRERF1Q96PN7 1200 aa17.41■□□□□ 0.38
LIMS1-202ENST00000338045 FRMPD4Q14CM0 1322 aa17.41■□□□□ 0.38
LIMS1-202ENST00000338045 RBBP6Q7Z6E9 1792 aaKnown RBP17.4■□□□□ 0.38
LIMS1-202ENST00000338045 COL11A1P12107 1806 aaPredicted RBP17.4■□□□□ 0.38
LIMS1-202ENST00000338045 BECN2A8MW95 431 aa17.4■□□□□ 0.38
LIMS1-202ENST00000338045 GOLGA6L19H0YKK7 550 aa17.4■□□□□ 0.38
LIMS1-202ENST00000338045 IKBKBO14920 756 aa17.4■□□□□ 0.38
LIMS1-202ENST00000338045 MSH4O15457 936 aa17.4■□□□□ 0.38
LIMS1-202ENST00000338045 HOXA7P31268 230 aaPredicted RBP17.4■□□□□ 0.38
LIMS1-202ENST00000338045 SPIRE1Q08AE8 756 aa17.4■□□□□ 0.38
LIMS1-202ENST00000338045 CUL4BQ13620 913 aa17.4■□□□□ 0.38
LIMS1-202ENST00000338045 TMEM132BQ14DG7 1078 aa17.4■□□□□ 0.38
LIMS1-202ENST00000338045 AOPEPQ8N6M6 819 aa17.4■□□□□ 0.38
LIMS1-202ENST00000338045 CYP2W1Q8TAV3 490 aa17.4■□□□□ 0.38
LIMS1-202ENST00000338045 SYTL5Q8TDW5 730 aaPredicted RBP17.4■□□□□ 0.38
LIMS1-202ENST00000338045 STAMQ92783 540 aa17.4■□□□□ 0.38
LIMS1-202ENST00000338045 OTUD5Q96G74 571 aa17.4■□□□□ 0.38
LIMS1-202ENST00000338045 PNMA5Q96PV4 448 aa17.4■□□□□ 0.38
LIMS1-202ENST00000338045 STK17AQ9UEE5 414 aa17.4■□□□□ 0.38
LIMS1-202ENST00000338045 RIPK3Q9Y572 518 aa17.4■□□□□ 0.38
LIMS1-202ENST00000338045 ADCY5O95622 1261 aa17.39■□□□□ 0.38
LIMS1-202ENST00000338045 POTEIP0CG38 1075 aa17.39■□□□□ 0.38
LIMS1-202ENST00000338045 POTEJP0CG39 1038 aa17.39■□□□□ 0.38
LIMS1-202ENST00000338045 ZNF76P36508 570 aa17.39■□□□□ 0.38
LIMS1-202ENST00000338045 PPIL2Q13356 520 aa17.39■□□□□ 0.38
LIMS1-202ENST00000338045 TTLL12Q14166 644 aaPredicted RBP17.39■□□□□ 0.38
LIMS1-202ENST00000338045 TMEM119Q4V9L6 283 aa17.39■□□□□ 0.38
LIMS1-202ENST00000338045 TREML2Q5T2D2 321 aa17.39■□□□□ 0.38
LIMS1-202ENST00000338045 SNX29Q8TEQ0 813 aa17.39■□□□□ 0.38
LIMS1-202ENST00000338045 PLIN2Q99541 437 aa17.39■□□□□ 0.38
LIMS1-202ENST00000338045 NUDT12Q9BQG2 462 aa17.39■□□□□ 0.38
LIMS1-202ENST00000338045 MAF1Q9H063 256 aa17.39■□□□□ 0.38
LIMS1-202ENST00000338045 UNCXA6NJT0 531 aa17.39■□□□□ 0.37
LIMS1-202ENST00000338045 RPS6P62753 249 aaKnown RBP17.39■□□□□ 0.37
LIMS1-202ENST00000338045 SEMA3FQ13275 785 aa17.39■□□□□ 0.37
LIMS1-202ENST00000338045 NCAPHQ15003 741 aa17.39■□□□□ 0.37
LIMS1-202ENST00000338045 TKFCQ3LXA3 575 aa17.39■□□□□ 0.37
LIMS1-202ENST00000338045 CEP55Q53EZ4 464 aa17.39■□□□□ 0.37
LIMS1-202ENST00000338045 CT47A1Q5JQC4 288 aaPredicted RBP17.39■□□□□ 0.37
LIMS1-202ENST00000338045 TEX13BQ9BXU2 312 aa17.39■□□□□ 0.37
LIMS1-202ENST00000338045 BLZF1Q9H2G9 400 aa17.39■□□□□ 0.37
LIMS1-202ENST00000338045 HOMER2Q9NSB8 354 aa17.39■□□□□ 0.37
LIMS1-202ENST00000338045 RNF146Q9NTX7 359 aa17.39■□□□□ 0.37
LIMS1-202ENST00000338045 BLOC1S4Q9NUP1 217 aa17.39■□□□□ 0.37
LIMS1-202ENST00000338045 MEIS1O00470 390 aa17.38■□□□□ 0.37
LIMS1-202ENST00000338045 SNRNP48Q6IEG0 339 aaKnown RBP17.38■□□□□ 0.37
LIMS1-202ENST00000338045 SARM1Q6SZW1 724 aa17.38■□□□□ 0.37
LIMS1-202ENST00000338045 DACH1Q9UI36 760 aa17.38■□□□□ 0.37
LIMS1-202ENST00000338045 SMTNL1A8MU46 457 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 SETQ01105 290 aaPredicted RBP17.37■□□□□ 0.37
LIMS1-202ENST00000338045 LBX2Q6XYB7 198 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 VAV3Q9UKW4 847 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 CLEC11AQ9Y240 323 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 KDM3AQ9Y4C1 1321 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 A0A0G2JMZ2 1700 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 RPN1P04843 607 aaKnown RBP17.37■□□□□ 0.37
LIMS1-202ENST00000338045 BCRP11274 1271 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 UBXN2AP68543 259 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 KCNB1Q14721 858 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 PCNX4Q63HM2 1172 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 MAP1SQ66K74 1059 aaPredicted RBP17.37■□□□□ 0.37
LIMS1-202ENST00000338045 SLC30A10Q6XR72 485 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 RNF207Q6ZRF8 634 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 NIPA1Q7RTP0 329 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 PLA2G4DQ86XP0 818 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 SLC5A5Q92911 643 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 CDK5RAP3Q96JB5 506 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 C7orf25Q9BPX7 421 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 NT5C3AQ9H0P0 336 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 RMND1Q9NWS8 449 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 STK24Q9Y6E0 443 aa17.37■□□□□ 0.37
LIMS1-202ENST00000338045 STAT3P40763 770 aa17.36■□□□□ 0.37
LIMS1-202ENST00000338045 AMPD3Q01432 767 aa17.36■□□□□ 0.37
LIMS1-202ENST00000338045 MYL5Q02045 173 aa17.36■□□□□ 0.37
LIMS1-202ENST00000338045 MOGSQ13724 837 aa17.36■□□□□ 0.37
LIMS1-202ENST00000338045 ECM1Q16610 540 aa17.36■□□□□ 0.37
LIMS1-202ENST00000338045 POTEEQ6S8J3 1075 aa17.36■□□□□ 0.37
LIMS1-202ENST00000338045 MB21D1Q8N884 522 aa17.36■□□□□ 0.37
LIMS1-202ENST00000338045 OPTNQ96CV9 577 aa17.36■□□□□ 0.37
LIMS1-202ENST00000338045 MXRA8Q9BRK3 442 aa17.36■□□□□ 0.37
LIMS1-202ENST00000338045 TRIM9Q9C026 710 aa17.36■□□□□ 0.37
LIMS1-202ENST00000338045 ZMYND15Q9H091 742 aa17.36■□□□□ 0.37
LIMS1-202ENST00000338045 TRAF5O00463 557 aa17.35■□□□□ 0.37
LIMS1-202ENST00000338045 KLRC4O43908 158 aa17.35■□□□□ 0.37
LIMS1-202ENST00000338045 PSMD10O75832 226 aa17.35■□□□□ 0.37
LIMS1-202ENST00000338045 ERCC5P28715 1186 aaPredicted RBP17.35■□□□□ 0.37
LIMS1-202ENST00000338045 PLCB2Q00722 1185 aa17.35■□□□□ 0.37
LIMS1-202ENST00000338045 HAUS3Q68CZ6 603 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms