RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 CCSER1Q9C0I3 900 aa16.58■□□□□ 0.24
CBX3-201ENST00000337620 SPATC1LQ9H0A9 340 aa16.58■□□□□ 0.24
CBX3-201ENST00000337620 GRPEL1Q9HAV7 217 aa16.58■□□□□ 0.24
CBX3-201ENST00000337620 POTEMA6NI47 508 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 SLFN14P0C7P3 912 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 EIF2AK2P19525 551 aaKnown RBP16.57■□□□□ 0.24
CBX3-201ENST00000337620 DEKP35659 375 aaKnown RBP16.57■□□□□ 0.24
CBX3-201ENST00000337620 CEP55Q53EZ4 464 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 SPRYD7Q5W111 196 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 KANK3Q6NY19 840 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 GRAMD1CQ8IYS0 662 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 ETNPPLQ8TBG4 499 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 CCDC34Q96HJ3 373 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 RMDN3Q96TC7 470 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 CCDC39Q9UFE4 941 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 RABGAP1Q9Y3P9 1069 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 RPTORQ8N122 1335 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 MSH4O15457 936 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 ARHGEF16Q5VV41 709 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 RRAGBQ5VZM2 374 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 NCAPG2Q86XI2 1143 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 PLA2G4DQ86XP0 818 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 RIOX2Q8IUF8 465 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 CHST13Q8NET6 341 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 IL31RAQ8NI17 732 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 A1CFQ9NQ94 594 aaKnown RBP16.57■□□□□ 0.24
CBX3-201ENST00000337620 DISC1Q9NRI5 854 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 CYP39A1Q9NYL5 469 aa16.57■□□□□ 0.24
CBX3-201ENST00000337620 RBBP6Q7Z6E9 1792 aaKnown RBP16.56■□□□□ 0.24
CBX3-201ENST00000337620 IGLV3-22A0A075B6J6 115 aa16.56■□□□□ 0.24
CBX3-201ENST00000337620 A0A087WWV3 80 aa16.56■□□□□ 0.24
CBX3-201ENST00000337620 TBX3O15119 743 aa16.56■□□□□ 0.24
CBX3-201ENST00000337620 ZBTB48P10074 688 aaPredicted RBP16.56■□□□□ 0.24
CBX3-201ENST00000337620 CYP2C8P10632 490 aa16.56■□□□□ 0.24
CBX3-201ENST00000337620 STAT6P42226 847 aa16.56■□□□□ 0.24
CBX3-201ENST00000337620 AFMP43652 599 aa16.56■□□□□ 0.24
CBX3-201ENST00000337620 MRE11P49959 708 aa16.56■□□□□ 0.24
CBX3-201ENST00000337620 MDM2Q00987 491 aaPredicted RBP16.56■□□□□ 0.24
CBX3-201ENST00000337620 POSTNQ15063 836 aa16.56■□□□□ 0.24
CBX3-201ENST00000337620 E2F4Q16254 413 aa16.56■□□□□ 0.24
CBX3-201ENST00000337620 L1TD1Q5T7N2 865 aaKnown RBP16.56■□□□□ 0.24
CBX3-201ENST00000337620 ELOA2Q8IYF1 753 aaPredicted RBP16.56■□□□□ 0.24
CBX3-201ENST00000337620 BRI3BPQ8WY22 251 aa16.56■□□□□ 0.24
CBX3-201ENST00000337620 RBPJLQ9UBG7 517 aa16.56■□□□□ 0.24
CBX3-201ENST00000337620 USP25Q9UHP3 1055 aa16.56■□□□□ 0.24
CBX3-201ENST00000337620 PNMA3Q9UL41 463 aa16.56■□□□□ 0.24
CBX3-201ENST00000337620 BTBD19C9JJ37 291 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 PDHXO00330 501 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 BIN1O00499 593 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 CNMDO75829 334 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 MYCLP12524 364 aaPredicted RBP16.55■□□□□ 0.24
CBX3-201ENST00000337620 ANKRD35Q8N283 1001 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 PAGE5Q96GU1 130 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 FAM20AQ96MK3 541 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 MMTAG2Q9BU76 263 aaKnown RBP16.55■□□□□ 0.24
CBX3-201ENST00000337620 TXNRD2Q9NNW7 524 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 PXMP2Q9NR77 195 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 TRPM7Q96QT4 1865 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 PRR29P0C7W0 189 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 ZNF157P51786 506 aaPredicted RBP16.55■□□□□ 0.24
CBX3-201ENST00000337620 PGM5Q15124 567 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 ANO6Q4KMQ2 910 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 KRT79Q5XKE5 535 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 PCNX4Q63HM2 1172 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 STAMQ92783 540 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 CALML4Q96GE6 196 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 MXRA8Q9BRK3 442 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 MOV10L1Q9BXT6 1211 aaKnown RBP16.55■□□□□ 0.24
CBX3-201ENST00000337620 FBXO40Q9UH90 709 aa16.55■□□□□ 0.24
CBX3-201ENST00000337620 MEIS1O00470 390 aa16.54■□□□□ 0.24
CBX3-201ENST00000337620 PLCG1P19174 1290 aa16.54■□□□□ 0.24
CBX3-201ENST00000337620 Q3C1V9 767 aa16.54■□□□□ 0.24
CBX3-201ENST00000337620 ISM2Q6H9L7 571 aa16.54■□□□□ 0.24
CBX3-201ENST00000337620 SNX29Q8TEQ0 813 aa16.54■□□□□ 0.24
CBX3-201ENST00000337620 SMCR8Q8TEV9 937 aaPredicted RBP16.54■□□□□ 0.24
CBX3-201ENST00000337620 PDCD2LQ9BRP1 358 aa16.54■□□□□ 0.24
CBX3-201ENST00000337620 PCDHA5Q9Y5H7 936 aa16.54■□□□□ 0.24
CBX3-201ENST00000337620 A0A0G2JMZ2 1700 aa16.54■□□□□ 0.24
CBX3-201ENST00000337620 ARP10275 920 aa16.54■□□□□ 0.24
CBX3-201ENST00000337620 ITGB5P18084 799 aa16.54■□□□□ 0.24
CBX3-201ENST00000337620 MRPS9P82933 396 aaKnown RBP16.54■□□□□ 0.24
CBX3-201ENST00000337620 STX1AQ16623 288 aa16.54■□□□□ 0.24
CBX3-201ENST00000337620 PDXDC2PQ6P474 469 aa16.54■□□□□ 0.24
CBX3-201ENST00000337620 CDK5RAP3Q96JB5 506 aa16.54■□□□□ 0.24
CBX3-201ENST00000337620 DNAJC25Q9H1X3 360 aa16.54■□□□□ 0.24
CBX3-201ENST00000337620 FRMPD4Q14CM0 1322 aa16.54■□□□□ 0.24
CBX3-201ENST00000337620 SLC25A27O95847 323 aa16.53■□□□□ 0.24
CBX3-201ENST00000337620 ERCC3P19447 782 aa16.53■□□□□ 0.24
CBX3-201ENST00000337620 SETQ01105 290 aaPredicted RBP16.53■□□□□ 0.24
CBX3-201ENST00000337620 NCAPH2Q6IBW4 605 aa16.53■□□□□ 0.24
CBX3-201ENST00000337620 ANKRD23Q86SG2 305 aa16.53■□□□□ 0.24
CBX3-201ENST00000337620 NSUN6Q8TEA1 469 aaKnown RBP16.53■□□□□ 0.24
CBX3-201ENST00000337620 NUDT12Q9BQG2 462 aa16.53■□□□□ 0.24
CBX3-201ENST00000337620 ZNF577Q9BSK1 485 aa16.53■□□□□ 0.24
CBX3-201ENST00000337620 WDR11Q9BZH6 1224 aa16.53■□□□□ 0.24
CBX3-201ENST00000337620 ANO10Q9NW15 660 aa16.53■□□□□ 0.24
CBX3-201ENST00000337620 TUBE1Q9UJT0 475 aa16.53■□□□□ 0.24
CBX3-201ENST00000337620 XRCC6P12956 609 aaKnown RBP eCLIP16.52■□□□□ 0.24
CBX3-201ENST00000337620 CASP1P29466 404 aa16.52■□□□□ 0.24
CBX3-201ENST00000337620 NAALADL2Q58DX5 795 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms