RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 RASGRP4Q8TDF6 673 aa17.54■□□□□ 0.4
SEC13-201ENST00000337354 CRYGNQ8WXF5 182 aa17.54■□□□□ 0.4
SEC13-201ENST00000337354 RBM47A0AV96 593 aaKnown RBP17.53■□□□□ 0.4
SEC13-201ENST00000337354 ADAMTS3O15072 1205 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 SEPT4O43236 478 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 TGFB3P10600 412 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 CAPN2P17655 700 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 MRPS9P82933 396 aaKnown RBP17.53■□□□□ 0.4
SEC13-201ENST00000337354 ARHGAP4P98171 946 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 GUCY1B3Q02153 619 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 TAPT1Q6NXT6 567 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 EEPD1Q7L9B9 569 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 NLRX1Q86UT6 975 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 OXER1Q8TDS5 423 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 ZHX1Q9UKY1 873 aaPredicted RBP17.53■□□□□ 0.4
SEC13-201ENST00000337354 KIAA0100Q14667 2235 aaKnown RBP17.53■□□□□ 0.4
SEC13-201ENST00000337354 AKR1A1P14550 325 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 CNGA1P29973 690 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 ANP32AP39687 249 aaKnown RBP17.53■□□□□ 0.4
SEC13-201ENST00000337354 FOSBP53539 338 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 GNL2Q13823 731 aaKnown RBP17.53■□□□□ 0.4
SEC13-201ENST00000337354 TRPV1Q8NER1 839 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 IL31RAQ8NI17 732 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 TBCKQ8TEA7 893 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 SCFD2Q8WU76 684 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 TNFRSF25Q93038 417 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 CDHR1Q96JP9 859 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 PGBD1Q96JS3 809 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 INPP4AQ96PE3 977 aaPredicted RBP17.53■□□□□ 0.4
SEC13-201ENST00000337354 RNF208Q9H0X6 261 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 FOXD4L1Q9NU39 408 aa17.53■□□□□ 0.4
SEC13-201ENST00000337354 POTEFA5A3E0 1075 aa17.52■□□□□ 0.39
SEC13-201ENST00000337354 CCL5P13501 91 aa17.52■□□□□ 0.39
SEC13-201ENST00000337354 U2AF2P26368 475 aaKnown RBP eCLIP17.52■□□□□ 0.395e-11■■□□□ 11.9
SEC13-201ENST00000337354 CCND3P30281 292 aaPredicted RBP17.52■□□□□ 0.39
SEC13-201ENST00000337354 ICAM3P32942 547 aa17.52■□□□□ 0.39
SEC13-201ENST00000337354 CIITAP33076 1130 aa17.52■□□□□ 0.39
SEC13-201ENST00000337354 ZNF76P36508 570 aa17.52■□□□□ 0.39
SEC13-201ENST00000337354 NR5A1Q13285 461 aa17.52■□□□□ 0.39
SEC13-201ENST00000337354 TTLL4Q14679 1199 aa17.52■□□□□ 0.39
SEC13-201ENST00000337354 MTFR1Q15390 333 aa17.52■□□□□ 0.39
SEC13-201ENST00000337354 CCDC144BQ3MJ40 725 aa17.52■□□□□ 0.39
SEC13-201ENST00000337354 CEP55Q53EZ4 464 aa17.52■□□□□ 0.39
SEC13-201ENST00000337354 PIK3AP1Q6ZUJ8 805 aa17.52■□□□□ 0.39
SEC13-201ENST00000337354 FBXO16Q8IX29 292 aaPredicted RBP17.52■□□□□ 0.39
SEC13-201ENST00000337354 NAP1L4Q99733 375 aaKnown RBP17.52■□□□□ 0.39
SEC13-201ENST00000337354 MXRA8Q9BRK3 442 aa17.52■□□□□ 0.39
SEC13-201ENST00000337354 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.52■□□□□ 0.391e-7■■□□□ 12.5
SEC13-201ENST00000337354 UNC93B1Q9H1C4 597 aa17.52■□□□□ 0.39
SEC13-201ENST00000337354 PAK6Q9NQU5 681 aaPredicted RBP17.52■□□□□ 0.39
SEC13-201ENST00000337354 DDX20Q9UHI6 824 aaKnown RBP17.52■□□□□ 0.39
SEC13-201ENST00000337354 UBIAD1Q9Y5Z9 338 aa17.52■□□□□ 0.39
SEC13-201ENST00000337354 DDX49Q9Y6V7 483 aaKnown RBP17.52■□□□□ 0.39
SEC13-201ENST00000337354 MYH6P13533 1939 aa17.51■□□□□ 0.39
SEC13-201ENST00000337354 NKRFO15226 690 aaKnown RBP eCLIP17.51■□□□□ 0.39
SEC13-201ENST00000337354 FIBPO43427 364 aa17.51■□□□□ 0.39
SEC13-201ENST00000337354 SYT1P21579 422 aa17.51■□□□□ 0.39
SEC13-201ENST00000337354 TNFAIP2Q03169 654 aa17.51■□□□□ 0.39
SEC13-201ENST00000337354 MOXD1Q6UVY6 613 aa17.51■□□□□ 0.39
SEC13-201ENST00000337354 SEPT14Q6ZU15 432 aa17.51■□□□□ 0.39
SEC13-201ENST00000337354 NIPA1Q7RTP0 329 aa17.51■□□□□ 0.39
SEC13-201ENST00000337354 GPRASP2Q96D09 838 aa17.51■□□□□ 0.39
SEC13-201ENST00000337354 WDR11Q9BZH6 1224 aa17.51■□□□□ 0.39
SEC13-201ENST00000337354 JADE2Q9NQC1 790 aa17.51■□□□□ 0.39
SEC13-201ENST00000337354 RTEL1Q9NZ71 1219 aa17.51■□□□□ 0.39
SEC13-201ENST00000337354 Q9Y3F1 56 aa17.51■□□□□ 0.39
SEC13-201ENST00000337354 CENPFP49454 3210 aa17.51■□□□□ 0.39
SEC13-201ENST00000337354 FRMPD3Q5JV73 1810 aa17.5■□□□□ 0.39
SEC13-201ENST00000337354 SMCHD1A6NHR9 2005 aa17.5■□□□□ 0.39
SEC13-201ENST00000337354 SPATA31C2B4DYI2 1134 aa17.5■□□□□ 0.39
SEC13-201ENST00000337354 MEIS1O00470 390 aa17.5■□□□□ 0.39
SEC13-201ENST00000337354 RGS20O76081 388 aa17.5■□□□□ 0.39
SEC13-201ENST00000337354 GJB1P08034 283 aa17.5■□□□□ 0.39
SEC13-201ENST00000337354 ITGB5P18084 799 aa17.5■□□□□ 0.39
SEC13-201ENST00000337354 ADCYAP1R1P41586 468 aa17.5■□□□□ 0.39
SEC13-201ENST00000337354 DUSP28Q4G0W2 176 aa17.5■□□□□ 0.39
SEC13-201ENST00000337354 NEK8Q86SG6 692 aa17.5■□□□□ 0.39
SEC13-201ENST00000337354 NOSTRINQ8IVI9 506 aa17.5■□□□□ 0.39
SEC13-201ENST00000337354 PDGFCQ9NRA1 345 aa17.5■□□□□ 0.39
SEC13-201ENST00000337354 MRVI1Q9Y6F6 885 aa17.5■□□□□ 0.39
SEC13-201ENST00000337354 CYP3A7-CYP3A51PA0A087WV96 503 aa17.49■□□□□ 0.39
SEC13-201ENST00000337354 DUSP11O75319 330 aaKnown RBP17.49■□□□□ 0.39
SEC13-201ENST00000337354 TXNP10599 105 aaKnown RBP17.49■□□□□ 0.39
SEC13-201ENST00000337354 RARBP10826 455 aa17.49■□□□□ 0.39
SEC13-201ENST00000337354 CYP3A7P24462 503 aa17.49■□□□□ 0.39
SEC13-201ENST00000337354 MTMR1Q13613 665 aa17.49■□□□□ 0.39
SEC13-201ENST00000337354 INF2Q27J81 1249 aa17.49■□□□□ 0.39
SEC13-201ENST00000337354 MCTP1Q6DN14 999 aa17.49■□□□□ 0.39
SEC13-201ENST00000337354 PPP4R3AQ6IN85 833 aa17.49■□□□□ 0.39
SEC13-201ENST00000337354 CCDC62Q6P9F0 684 aa17.49■□□□□ 0.39
SEC13-201ENST00000337354 GIMAP8Q8ND71 665 aaPredicted RBP17.49■□□□□ 0.39
SEC13-201ENST00000337354 SENP7Q9BQF6 1050 aa17.49■□□□□ 0.39
SEC13-201ENST00000337354 DDX41Q9UJV9 622 aaKnown RBP17.49■□□□□ 0.39
SEC13-201ENST00000337354 STX6O43752 255 aa17.48■□□□□ 0.39
SEC13-201ENST00000337354 GCFC2P16383 781 aaKnown RBP17.48■□□□□ 0.39
SEC13-201ENST00000337354 SMPD1P17405 629 aa17.48■□□□□ 0.39
SEC13-201ENST00000337354 TRAPPC10P48553 1259 aa17.48■□□□□ 0.39
SEC13-201ENST00000337354 SETQ01105 290 aaPredicted RBP17.48■□□□□ 0.39
SEC13-201ENST00000337354 EARS2Q5JPH6 523 aaKnown RBP17.48■□□□□ 0.39
SEC13-201ENST00000337354 LHX8Q68G74 356 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms