RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 RRAGAQ7L523 313 aa23.85■■□□□ 1.41
PTDSS1-201ENST00000337004 CREG2Q8IUH2 290 aa23.85■■□□□ 1.41
PTDSS1-201ENST00000337004 DDX12PQ92771 950 aa23.85■■□□□ 1.41
PTDSS1-201ENST00000337004 FAM204AQ9H8W3 233 aa23.85■■□□□ 1.41
PTDSS1-201ENST00000337004 MTMR4Q9NYA4 1195 aa23.85■■□□□ 1.41
PTDSS1-201ENST00000337004 GGA1Q9UJY5 639 aa23.85■■□□□ 1.41
PTDSS1-201ENST00000337004 A0A0U1RQG5 324 aaPredicted RBP23.84■■□□□ 1.41
PTDSS1-201ENST00000337004 RNF40O75150 1001 aa23.84■■□□□ 1.41
PTDSS1-201ENST00000337004 ITIH3Q06033 890 aa23.84■■□□□ 1.41
PTDSS1-201ENST00000337004 MMGT1Q8N4V1 131 aa23.84■■□□□ 1.41
PTDSS1-201ENST00000337004 CRACR2AQ9BSW2 395 aa23.84■■□□□ 1.41
PTDSS1-201ENST00000337004 EDEM3Q9BZQ6 932 aa23.84■■□□□ 1.41
PTDSS1-201ENST00000337004 POTEMA6NI47 508 aa23.84■■□□□ 1.41
PTDSS1-201ENST00000337004 LRRC53A6NM62 1247 aa23.84■■□□□ 1.41
PTDSS1-201ENST00000337004 RPS6KA5O75582 802 aa23.84■■□□□ 1.41
PTDSS1-201ENST00000337004 ZMYND10O75800 440 aa23.84■■□□□ 1.41
PTDSS1-201ENST00000337004 SYF2O95926 243 aaKnown RBP23.84■■□□□ 1.41
PTDSS1-201ENST00000337004 C2orf54Q08AI8 447 aa23.84■■□□□ 1.41
PTDSS1-201ENST00000337004 SMCR8Q8TEV9 937 aaPredicted RBP23.84■■□□□ 1.41
PTDSS1-201ENST00000337004 TBC1D22AQ8WUA7 517 aa23.84■■□□□ 1.41
PTDSS1-201ENST00000337004 TSPYL1Q9H0U9 437 aa23.84■■□□□ 1.41
PTDSS1-201ENST00000337004 CAPN6Q9Y6Q1 641 aa23.84■■□□□ 1.41
PTDSS1-201ENST00000337004 PROM2Q8N271 834 aa23.83■■□□□ 1.41
PTDSS1-201ENST00000337004 MOCS3O95396 460 aa23.83■■□□□ 1.4
PTDSS1-201ENST00000337004 TCP1P17987 556 aaKnown RBP23.83■■□□□ 1.4
PTDSS1-201ENST00000337004 MAGEA1P43355 309 aa23.83■■□□□ 1.4
PTDSS1-201ENST00000337004 TMEM119Q4V9L6 283 aa23.83■■□□□ 1.4
PTDSS1-201ENST00000337004 PPP4R3AQ6IN85 833 aa23.83■■□□□ 1.4
PTDSS1-201ENST00000337004 LRRC55Q6ZSA7 311 aa23.83■■□□□ 1.4
PTDSS1-201ENST00000337004 ZNF572Q7Z3I7 529 aaPredicted RBP23.83■■□□□ 1.4
PTDSS1-201ENST00000337004 CACNA2D4Q7Z3S7 1137 aa23.83■■□□□ 1.4
PTDSS1-201ENST00000337004 RUBCNQ92622 972 aa23.83■■□□□ 1.4
PTDSS1-201ENST00000337004 MLXIPQ9HAP2 919 aa23.83■■□□□ 1.4
PTDSS1-201ENST00000337004 GAKO14976 1311 aa23.82■■□□□ 1.4
PTDSS1-201ENST00000337004 ARHGAP27Q6ZUM4 889 aa23.82■■□□□ 1.4
PTDSS1-201ENST00000337004 TRERF1Q96PN7 1200 aa23.82■■□□□ 1.4
PTDSS1-201ENST00000337004 SELENOOQ9BVL4 669 aa23.82■■□□□ 1.4
PTDSS1-201ENST00000337004 TNRC6CQ9HCJ0 1690 aaKnown RBP23.82■■□□□ 1.4
PTDSS1-201ENST00000337004 EDIL3O43854 480 aa23.81■■□□□ 1.4
PTDSS1-201ENST00000337004 TNNI2P48788 182 aa23.81■■□□□ 1.4
PTDSS1-201ENST00000337004 EHHADHQ08426 723 aa23.81■■□□□ 1.4
PTDSS1-201ENST00000337004 SEPT2Q15019 361 aa23.81■■□□□ 1.4
PTDSS1-201ENST00000337004 VPS72Q15906 364 aa23.81■■□□□ 1.4
PTDSS1-201ENST00000337004 PPP1R18Q6NYC8 613 aa23.81■■□□□ 1.4
PTDSS1-201ENST00000337004 AFAP1L1Q8TED9 768 aa23.81■■□□□ 1.4
PTDSS1-201ENST00000337004 NUDT12Q9BQG2 462 aa23.81■■□□□ 1.4
PTDSS1-201ENST00000337004 TANGO6Q9C0B7 1094 aa23.81■■□□□ 1.4
PTDSS1-201ENST00000337004 MYOCDQ8IZQ8 938 aa23.81■■□□□ 1.4
PTDSS1-201ENST00000337004 BAP1Q92560 729 aa23.81■■□□□ 1.4
PTDSS1-201ENST00000337004 DRC1Q96MC2 740 aa23.81■■□□□ 1.4
PTDSS1-201ENST00000337004 FAM184BQ9ULE4 1060 aa23.81■■□□□ 1.4
PTDSS1-201ENST00000337004 HYOU1Q9Y4L1 999 aa23.81■■□□□ 1.4
PTDSS1-201ENST00000337004 PLIN4Q96Q06 1357 aa23.8■■□□□ 1.4
PTDSS1-201ENST00000337004 PNMA6FA0A0J9YX94 578 aa23.8■■□□□ 1.4
PTDSS1-201ENST00000337004 SNHG28P0DPA3 235 aa23.8■■□□□ 1.4
PTDSS1-201ENST00000337004 FKBP3Q00688 224 aaKnown RBP23.8■■□□□ 1.4
PTDSS1-201ENST00000337004 LRRC47Q8N1G4 583 aaKnown RBP23.8■■□□□ 1.4
PTDSS1-201ENST00000337004 OSBPL9Q96SU4 736 aa23.8■■□□□ 1.4
PTDSS1-201ENST00000337004 BMP2KQ9NSY1 1161 aaPredicted RBP23.8■■□□□ 1.4
PTDSS1-201ENST00000337004 SSU72P8A0A1W2PR75 194 aa23.8■■□□□ 1.4
PTDSS1-201ENST00000337004 PJA2O43164 708 aa23.8■■□□□ 1.4
PTDSS1-201ENST00000337004 MARCH6O60337 910 aa23.8■■□□□ 1.4
PTDSS1-201ENST00000337004 PRPF6O94906 941 aaKnown RBP23.8■■□□□ 1.4
PTDSS1-201ENST00000337004 LRRC41Q15345 812 aa23.8■■□□□ 1.4
PTDSS1-201ENST00000337004 PDXDC1Q6P996 788 aa23.8■■□□□ 1.4
PTDSS1-201ENST00000337004 SPATA4Q8NEY3 305 aa23.8■■□□□ 1.4
PTDSS1-201ENST00000337004 GDAP1L1Q96MZ0 367 aa23.8■■□□□ 1.4
PTDSS1-201ENST00000337004 NUCKS1Q9H1E3 243 aaKnown RBP23.8■■□□□ 1.4
PTDSS1-201ENST00000337004 GPCPD1Q9NPB8 672 aa23.8■■□□□ 1.4
PTDSS1-201ENST00000337004 DDX60LQ5H9U9 1706 aaKnown RBP23.8■■□□□ 1.4
PTDSS1-201ENST00000337004 MAPK8IP2Q13387 824 aaPredicted RBP23.79■■□□□ 1.4
PTDSS1-201ENST00000337004 CCDC181Q5TID7 509 aa23.79■■□□□ 1.4
PTDSS1-201ENST00000337004 PRR5LQ6MZQ0 368 aa23.79■■□□□ 1.4
PTDSS1-201ENST00000337004 KCNK18Q7Z418 384 aa23.79■■□□□ 1.4
PTDSS1-201ENST00000337004 DDX25Q9UHL0 483 aaKnown RBP23.79■■□□□ 1.4
PTDSS1-201ENST00000337004 COL4A3BPQ9Y5P4 624 aa23.79■■□□□ 1.4
PTDSS1-201ENST00000337004 MYBL2P10244 700 aa23.79■■□□□ 1.4
PTDSS1-201ENST00000337004 RBM17Q96I25 401 aaKnown RBP23.79■■□□□ 1.4
PTDSS1-201ENST00000337004 ZC3H4Q9UPT8 1303 aaKnown RBP23.78■■□□□ 1.4
PTDSS1-201ENST00000337004 GGCXP38435 758 aa23.78■■□□□ 1.4
PTDSS1-201ENST00000337004 PAFAH1B1P43034 410 aa23.78■■□□□ 1.4
PTDSS1-201ENST00000337004 MRPL12P52815 198 aaKnown RBP23.78■■□□□ 1.4
PTDSS1-201ENST00000337004 GSPT2Q8IYD1 628 aaKnown RBP23.78■■□□□ 1.4
PTDSS1-201ENST00000337004 RNF10Q8N5U6 811 aaKnown RBP23.78■■□□□ 1.4
PTDSS1-201ENST00000337004 CERKQ8TCT0 537 aa23.78■■□□□ 1.4
PTDSS1-201ENST00000337004 SBF2Q86WG5 1849 aa23.78■■□□□ 1.4
PTDSS1-201ENST00000337004 MYH1P12882 1939 aa23.78■■□□□ 1.4
PTDSS1-201ENST00000337004 TTLL1O95922 423 aa23.78■■□□□ 1.4
PTDSS1-201ENST00000337004 COASYQ13057 564 aa23.78■■□□□ 1.4
PTDSS1-201ENST00000337004 ASTE1Q2TB18 679 aaPredicted RBP23.78■■□□□ 1.4
PTDSS1-201ENST00000337004 CCDC40Q4G0X9 1142 aa23.78■■□□□ 1.4
PTDSS1-201ENST00000337004 AENQ8WTP8 325 aaKnown RBP23.78■■□□□ 1.4
PTDSS1-201ENST00000337004 CUL5Q93034 780 aa23.78■■□□□ 1.4
PTDSS1-201ENST00000337004 NOX5Q96PH1 765 aa23.78■■□□□ 1.4
PTDSS1-201ENST00000337004 JMJD4Q9H9V9 463 aa23.78■■□□□ 1.4
PTDSS1-201ENST00000337004 TRAF5O00463 557 aa23.77■■□□□ 1.4
PTDSS1-201ENST00000337004 AKR1B1P15121 316 aa23.77■■□□□ 1.4
PTDSS1-201ENST00000337004 EIF6P56537 245 aaKnown RBP23.77■■□□□ 1.4
PTDSS1-201ENST00000337004 GABPAQ06546 454 aa23.77■■□□□ 1.4
PTDSS1-201ENST00000337004 PICALMQ13492 652 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms