RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 CEP112Q8N8E3 955 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 RNF217Q8TC41 542 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 TBC1D22AQ8WUA7 517 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 SERPINB13Q9UIV8 391 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 LY75O60449 1722 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 CDK5RAP2Q96SN8 1893 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 TTC26A0AVF1 554 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 CTAGE15A4D2H0 777 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 USP17L10C9JJH3 530 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 KIF5CO60282 957 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 CTAGE8P0CG41 777 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 HOXA10P31260 410 aaPredicted RBP15.42■□□□□ 0.06
SF1-202ENST00000334944 CDC42EP5Q6NZY7 148 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 CTAGE6Q86UF2 777 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 EGFL6Q8IUX8 553 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 CTAGE4Q8IX94 777 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 N4BP2L2Q92802 583 aaPredicted RBP15.42■□□□□ 0.06
SF1-202ENST00000334944 SGSM3Q96HU1 749 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 TRIM9Q9C026 710 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 MYH1P12882 1939 aa15.41■□□□□ 0.06
SF1-202ENST00000334944 KIF1CO43896 1103 aaKnown RBP15.41■□□□□ 0.06
SF1-202ENST00000334944 IDEP14735 1019 aa15.41■□□□□ 0.06
SF1-202ENST00000334944 IRAK1P51617 712 aa15.41■□□□□ 0.06
SF1-202ENST00000334944 MRPS25P82663 173 aaKnown RBP15.41■□□□□ 0.06
SF1-202ENST00000334944 ANKRD40Q6AI12 368 aa15.41■□□□□ 0.06
SF1-202ENST00000334944 SLF2Q8IX21 1173 aa15.41■□□□□ 0.06
SF1-202ENST00000334944 ADGRF4Q8IZF3 695 aa15.41■□□□□ 0.06
SF1-202ENST00000334944 GLIS3Q8NEA6 775 aa15.41■□□□□ 0.06
SF1-202ENST00000334944 LZTS2Q9BRK4 669 aa15.41■□□□□ 0.06
SF1-202ENST00000334944 CCSER1Q9C0I3 900 aa15.41■□□□□ 0.06
SF1-202ENST00000334944 PSMA7O14818 248 aa15.41■□□□□ 0.06
SF1-202ENST00000334944 EDIL3O43854 480 aa15.41■□□□□ 0.06
SF1-202ENST00000334944 CALCRLQ16602 461 aa15.41■□□□□ 0.06
SF1-202ENST00000334944 NAIF1Q69YI7 327 aaPredicted RBP15.41■□□□□ 0.06
SF1-202ENST00000334944 KRT27Q7Z3Y8 459 aa15.41■□□□□ 0.06
SF1-202ENST00000334944 COL23A1Q86Y22 540 aaPredicted RBP15.41■□□□□ 0.06
SF1-202ENST00000334944 CNGA4Q8IV77 575 aa15.41■□□□□ 0.06
SF1-202ENST00000334944 ZSCAN29Q8IWY8 852 aaPredicted RBP15.41■□□□□ 0.06
SF1-202ENST00000334944 PCMTD1Q96MG8 357 aaPredicted RBP15.41■□□□□ 0.06
SF1-202ENST00000334944 EXOC1Q9NV70 894 aa15.41■□□□□ 0.06
SF1-202ENST00000334944 ATP6V0A2Q9Y487 856 aa15.41■□□□□ 0.06
SF1-202ENST00000334944 GOLGA6L9A6NEM1 432 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 ADCY7P51828 1080 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 LRRC41Q15345 812 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 GALNT17Q6IS24 598 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 FAM163AQ96GL9 167 aaPredicted RBP15.4■□□□□ 0.06
SF1-202ENST00000334944 CRAMP1Q96RY5 1269 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 DUSP9Q99956 384 aaKnown RBP15.4■□□□□ 0.06
SF1-202ENST00000334944 PYM1Q9BRP8 204 aaKnown RBP15.4■□□□□ 0.06
SF1-202ENST00000334944 JMJD4Q9H9V9 463 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 LRWD1Q9UFC0 647 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 ENC1O14682 589 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 SKAP2O75563 359 aaPredicted RBP15.4■□□□□ 0.06
SF1-202ENST00000334944 MMP10P09238 476 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 SRGNP10124 158 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 SHMT1P34896 483 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 TMED8Q6PL24 325 aaPredicted RBP15.4■□□□□ 0.06
SF1-202ENST00000334944 KCNK18Q7Z418 384 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 SP8Q8IXZ3 490 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 AGPAT5Q9NUQ2 364 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 LRRC10BA6NIK2 292 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 USP17L15C9J2P7 530 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 USP17L13C9JLJ4 530 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 USP17L11C9JVI0 530 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 USP17L18D6R9N7 530 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 USP17L22D6RA61 530 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 USP17L17D6RBQ6 530 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 USP17L19D6RCP7 530 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 USP17L20D6RJB6 530 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 SSBP05455 408 aaKnown RBP eCLIP15.4■□□□□ 0.06
SF1-202ENST00000334944 GABPAQ06546 454 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 USP17L24Q0WX57 530 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 BIRC2Q13490 618 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 TTI2Q6NXR4 508 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 USP17L6PQ6QN14 398 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 GIMAP8Q8ND71 665 aaPredicted RBP15.4■□□□□ 0.06
SF1-202ENST00000334944 CAPZA3Q96KX2 299 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 RIOX1Q9H6W3 641 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 HDAC6Q9UBN7 1215 aa15.4■□□□□ 0.06
SF1-202ENST00000334944 CTAGE9A4FU28 777 aa15.39■□□□□ 0.05
SF1-202ENST00000334944 H7C1D1 291 aa15.39■□□□□ 0.05
SF1-202ENST00000334944 RHOBTB3O94955 611 aa15.39■□□□□ 0.05
SF1-202ENST00000334944 FAM43BQ6ZT52 329 aaPredicted RBP15.39■□□□□ 0.05
SF1-202ENST00000334944 MB21D1Q8N884 522 aa15.39■□□□□ 0.05
SF1-202ENST00000334944 HPCAL4Q9UM19 191 aa15.39■□□□□ 0.05
SF1-202ENST00000334944 ONECUT3O60422 494 aaPredicted RBP15.39■□□□□ 0.05
SF1-202ENST00000334944 SRGAP2O75044 1071 aa15.39■□□□□ 0.05
SF1-202ENST00000334944 MYBL2P10244 700 aa15.39■□□□□ 0.05
SF1-202ENST00000334944 GNGT1P63211 74 aa15.39■□□□□ 0.05
SF1-202ENST00000334944 CACNB1Q02641 598 aaPredicted RBP15.39■□□□□ 0.05
SF1-202ENST00000334944 STIM1Q13586 685 aa15.39■□□□□ 0.05
SF1-202ENST00000334944 COA1Q9GZY4 146 aa15.39■□□□□ 0.05
SF1-202ENST00000334944 ACBD3Q9H3P7 528 aa15.39■□□□□ 0.05
SF1-202ENST00000334944 TBC1D7Q9P0N9 293 aa15.39■□□□□ 0.05
SF1-202ENST00000334944 MAGEC2Q9UBF1 373 aaPredicted RBP15.39■□□□□ 0.05
SF1-202ENST00000334944 GUCA1BQ9UMX6 200 aa15.39■□□□□ 0.05
SF1-202ENST00000334944 UBR3Q6ZT12 1888 aa15.39■□□□□ 0.05
SF1-202ENST00000334944 MYMKA6NI61 221 aa15.38■□□□□ 0.05
SF1-202ENST00000334944 MARCH6O60337 910 aa15.38■□□□□ 0.05
SF1-202ENST00000334944 TTLL1O95922 423 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms