RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 COBLO75128 1261 aa24.43■■□□□ 1.5
TPM1-204ENST00000334895 MCM4P33991 863 aa24.43■■□□□ 1.5
TPM1-204ENST00000334895 ALDH5A1P51649 535 aaPredicted RBP24.43■■□□□ 1.5
TPM1-204ENST00000334895 ATP2C1P98194 919 aaPredicted RBP24.43■■□□□ 1.5
TPM1-204ENST00000334895 PTGDRQ13258 359 aa24.43■■□□□ 1.5
TPM1-204ENST00000334895 POTEDQ86YR6 584 aa24.43■■□□□ 1.5
TPM1-204ENST00000334895 IGLV3-22A0A075B6J6 115 aa24.43■■□□□ 1.5
TPM1-204ENST00000334895 GPR25O00155 361 aa24.43■■□□□ 1.5
TPM1-204ENST00000334895 SPTLC2O15270 562 aa24.43■■□□□ 1.5
TPM1-204ENST00000334895 NR3C2P08235 984 aa24.43■■□□□ 1.5
TPM1-204ENST00000334895 GCFC2P16383 781 aaKnown RBP24.43■■□□□ 1.5
TPM1-204ENST00000334895 MARCKSP29966 332 aaPredicted RBP24.43■■□□□ 1.5
TPM1-204ENST00000334895 ORC2Q13416 577 aaPredicted RBP24.43■■□□□ 1.5
TPM1-204ENST00000334895 DDX25Q9UHL0 483 aaKnown RBP24.43■■□□□ 1.5
TPM1-204ENST00000334895 ELP1O95163 1332 aa24.42■■□□□ 1.5
TPM1-204ENST00000334895 SLC15A5A6NIM6 579 aa24.42■■□□□ 1.5
TPM1-204ENST00000334895 NEMFO60524 1076 aa24.42■■□□□ 1.5
TPM1-204ENST00000334895 ZNF792Q3KQV3 632 aa24.42■■□□□ 1.5
TPM1-204ENST00000334895 MORN1Q5T089 497 aa24.42■■□□□ 1.5
TPM1-204ENST00000334895 VSIG10LQ86VR7 867 aa24.42■■□□□ 1.5
TPM1-204ENST00000334895 KCNG4Q8TDN1 519 aa24.42■■□□□ 1.5
TPM1-204ENST00000334895 NAP1L4Q99733 375 aaKnown RBP24.42■■□□□ 1.5
TPM1-204ENST00000334895 ARHGAP39Q9C0H5 1083 aa24.42■■□□□ 1.5
TPM1-204ENST00000334895 CEP131Q9UPN4 1083 aa24.42■■□□□ 1.5
TPM1-204ENST00000334895 MORC2Q9Y6X9 1032 aaPredicted RBP24.42■■□□□ 1.5
TPM1-204ENST00000334895 BMP15O95972 392 aa24.41■■□□□ 1.5
TPM1-204ENST00000334895 MYCLP12524 364 aaPredicted RBP24.41■■□□□ 1.5
TPM1-204ENST00000334895 ITGB5P18084 799 aa24.41■■□□□ 1.5
TPM1-204ENST00000334895 EDNRBP24530 442 aa24.41■■□□□ 1.5
TPM1-204ENST00000334895 LACTBP83111 547 aaPredicted RBP24.41■■□□□ 1.5
TPM1-204ENST00000334895 CAP1Q01518 475 aa24.41■■□□□ 1.5
TPM1-204ENST00000334895 Q4G0T1 1027 aa24.41■■□□□ 1.5
TPM1-204ENST00000334895 ADD3Q9UEY8 706 aaKnown RBP24.41■■□□□ 1.5
TPM1-204ENST00000334895 PPP6R2O75170 966 aa24.4■■□□□ 1.5
TPM1-204ENST00000334895 PRPF40AO75400 957 aaKnown RBP24.4■■□□□ 1.5
TPM1-204ENST00000334895 CEP55Q53EZ4 464 aa24.4■■□□□ 1.5
TPM1-204ENST00000334895 PRR16Q569H4 304 aa24.4■■□□□ 1.5
TPM1-204ENST00000334895 ZNF296Q8WUU4 475 aaPredicted RBP24.4■■□□□ 1.5
TPM1-204ENST00000334895 MTMR9Q96QG7 549 aa24.4■■□□□ 1.5
TPM1-204ENST00000334895 IWS1Q96ST2 819 aa24.4■■□□□ 1.5
TPM1-204ENST00000334895 LMBRD1Q9NUN5 540 aa24.4■■□□□ 1.5
TPM1-204ENST00000334895 FBXO2Q9UK22 296 aaPredicted RBP24.4■■□□□ 1.5
TPM1-204ENST00000334895 UBIAD1Q9Y5Z9 338 aa24.4■■□□□ 1.5
TPM1-204ENST00000334895 MEIS1O00470 390 aa24.39■■□□□ 1.5
TPM1-204ENST00000334895 CCND2P30279 289 aa24.39■■□□□ 1.5
TPM1-204ENST00000334895 ZNF76P36508 570 aa24.39■■□□□ 1.5
TPM1-204ENST00000334895 GRIN1Q05586 938 aa24.39■■□□□ 1.5
TPM1-204ENST00000334895 IL17AQ16552 155 aa24.39■■□□□ 1.5
TPM1-204ENST00000334895 XRRA1Q6P2D8 792 aa24.39■■□□□ 1.5
TPM1-204ENST00000334895 USP6NLQ92738 828 aa24.39■■□□□ 1.5
TPM1-204ENST00000334895 MXRA8Q9BRK3 442 aa24.39■■□□□ 1.5
TPM1-204ENST00000334895 PCDHA7Q9UN72 937 aa24.39■■□□□ 1.5
TPM1-204ENST00000334895 MCM3APO60318 1980 aa24.39■■□□□ 1.49
TPM1-204ENST00000334895 GADD45BO75293 160 aaPredicted RBP24.39■■□□□ 1.49
TPM1-204ENST00000334895 NFKBIBQ15653 356 aa24.39■■□□□ 1.49
TPM1-204ENST00000334895 AXDND1Q5T1B0 1012 aaPredicted RBP24.39■■□□□ 1.49
TPM1-204ENST00000334895 HAS1Q92839 578 aa24.39■■□□□ 1.49
TPM1-204ENST00000334895 TRIM47Q96LD4 638 aa24.39■■□□□ 1.49
TPM1-204ENST00000334895 KCNMB3Q9NPA1 279 aa24.39■■□□□ 1.49
TPM1-204ENST00000334895 GJD2Q9UKL4 321 aa24.39■■□□□ 1.49
TPM1-204ENST00000334895 TNPO2O14787 897 aaKnown RBP24.38■■□□□ 1.49
TPM1-204ENST00000334895 RGS20O76081 388 aa24.38■■□□□ 1.49
TPM1-204ENST00000334895 OR52Z1P0C646 297 aa24.38■■□□□ 1.49
TPM1-204ENST00000334895 SP3Q02447 781 aa24.38■■□□□ 1.49
TPM1-204ENST00000334895 CALCRLQ16602 461 aa24.38■■□□□ 1.49
TPM1-204ENST00000334895 ETNPPLQ8TBG4 499 aa24.38■■□□□ 1.49
TPM1-204ENST00000334895 GJA10Q969M2 543 aa24.38■■□□□ 1.49
TPM1-204ENST00000334895 LAD1O00515 517 aa24.37■■□□□ 1.49
TPM1-204ENST00000334895 PSMC4P43686 418 aa24.37■■□□□ 1.49
TPM1-204ENST00000334895 ME1P48163 572 aa24.37■■□□□ 1.49
TPM1-204ENST00000334895 CSPP1Q1MSJ5 1256 aa24.37■■□□□ 1.49
TPM1-204ENST00000334895 PLA2G4DQ86XP0 818 aa24.37■■□□□ 1.49
TPM1-204ENST00000334895 NPLOC4Q8TAT6 608 aa24.37■■□□□ 1.49
TPM1-204ENST00000334895 MORC4Q8TE76 937 aa24.37■■□□□ 1.49
TPM1-204ENST00000334895 CLIC6Q96NY7 704 aa24.37■■□□□ 1.49
TPM1-204ENST00000334895 UIMC1Q96RL1 719 aa24.37■■□□□ 1.49
TPM1-204ENST00000334895 WDR11Q9BZH6 1224 aa24.37■■□□□ 1.49
TPM1-204ENST00000334895 JADE2Q9NQC1 790 aa24.37■■□□□ 1.49
TPM1-204ENST00000334895 SRPRBQ9Y5M8 271 aaKnown RBP24.37■■□□□ 1.49
TPM1-204ENST00000334895 MSH4O15457 936 aa24.36■■□□□ 1.49
TPM1-204ENST00000334895 FKTNO75072 461 aa24.36■■□□□ 1.49
TPM1-204ENST00000334895 ARP10275 920 aa24.36■■□□□ 1.49
TPM1-204ENST00000334895 FCGRTP55899 365 aa24.36■■□□□ 1.49
TPM1-204ENST00000334895 MAP2K5Q13163 448 aa24.36■■□□□ 1.49
TPM1-204ENST00000334895 ARL6IP4Q66PJ3 421 aaKnown RBP24.36■■□□□ 1.49
TPM1-204ENST00000334895 NIPA1Q7RTP0 329 aa24.36■■□□□ 1.49
TPM1-204ENST00000334895 DPP9Q86TI2 863 aa24.36■■□□□ 1.49
TPM1-204ENST00000334895 INPP4AQ96PE3 977 aaPredicted RBP24.36■■□□□ 1.49
TPM1-204ENST00000334895 KIAA1217Q5T5P2 1943 aa24.36■■□□□ 1.49
TPM1-204ENST00000334895 GOLGA6L22H0YM25 854 aa24.35■■□□□ 1.49
TPM1-204ENST00000334895 PRPHP41219 470 aa24.35■■□□□ 1.49
TPM1-204ENST00000334895 STXBP2Q15833 593 aa24.35■■□□□ 1.49
TPM1-204ENST00000334895 KRI1Q8N9T8 703 aaKnown RBP24.35■■□□□ 1.49
TPM1-204ENST00000334895 DIS3Q9Y2L1 958 aaKnown RBP24.35■■□□□ 1.49
TPM1-204ENST00000334895 LOC102724159A0A0B4J2E5 919 aa24.35■■□□□ 1.49
TPM1-204ENST00000334895 HOXC6P09630 235 aa24.35■■□□□ 1.49
TPM1-204ENST00000334895 SETQ01105 290 aaPredicted RBP24.35■■□□□ 1.49
TPM1-204ENST00000334895 PWP2Q15269 919 aaKnown RBP24.35■■□□□ 1.49
TPM1-204ENST00000334895 ZNF467Q7Z7K2 595 aaPredicted RBP24.35■■□□□ 1.49
TPM1-204ENST00000334895 MAML3Q96JK9 1138 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms