RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 EIF2AK2P19525 551 aaKnown RBP13.01□□□□□ -0.33
C9orf85-201ENST00000334731 MCM5P33992 734 aa13.01□□□□□ -0.33
C9orf85-201ENST00000334731 TRAF1Q13077 416 aa13.01□□□□□ -0.33
C9orf85-201ENST00000334731 CASC1Q6TDU7 716 aa13.01□□□□□ -0.33
C9orf85-201ENST00000334731 C16orf59Q7L2K0 433 aa13.01□□□□□ -0.33
C9orf85-201ENST00000334731 ZNF654Q8IZM8 581 aa13.01□□□□□ -0.33
C9orf85-201ENST00000334731 TMTC2Q8N394 836 aa13.01□□□□□ -0.33
C9orf85-201ENST00000334731 SAMD3Q8N6K7 520 aa13.01□□□□□ -0.33
C9orf85-201ENST00000334731 MAP3K14Q99558 947 aa13.01□□□□□ -0.33
C9orf85-201ENST00000334731 MTG1Q9BT17 334 aaPredicted RBP13.01□□□□□ -0.33
C9orf85-201ENST00000334731 MYL10Q9BUA6 226 aa13.01□□□□□ -0.33
C9orf85-201ENST00000334731 PXMP2Q9NR77 195 aa13.01□□□□□ -0.33
C9orf85-201ENST00000334731 PCDHB8Q9UN66 801 aa13.01□□□□□ -0.33
C9orf85-201ENST00000334731 LRRC37A2A6NM11 1700 aa13.01□□□□□ -0.33
C9orf85-201ENST00000334731 LTBP2Q14767 1821 aa13.01□□□□□ -0.33
C9orf85-201ENST00000334731 SH2B2O14492 632 aaPredicted RBP13□□□□□ -0.33
C9orf85-201ENST00000334731 B4GALT4O60513 344 aa13□□□□□ -0.33
C9orf85-201ENST00000334731 KPNA6O60684 536 aa13□□□□□ -0.33
C9orf85-201ENST00000334731 DDAH1O94760 285 aa13□□□□□ -0.33
C9orf85-201ENST00000334731 CHRM1P11229 460 aaPredicted RBP13□□□□□ -0.33
C9orf85-201ENST00000334731 CSF2RAP15509 400 aa13□□□□□ -0.33
C9orf85-201ENST00000334731 HOXA13P31271 388 aaPredicted RBP13□□□□□ -0.33
C9orf85-201ENST00000334731 CYP2C18P33260 490 aa13□□□□□ -0.33
C9orf85-201ENST00000334731 LY6KQ17RY6 165 aa13□□□□□ -0.33
C9orf85-201ENST00000334731 BRDTQ58F21 947 aaPredicted RBP13□□□□□ -0.33
C9orf85-201ENST00000334731 TMEM199Q8N511 208 aa13□□□□□ -0.33
C9orf85-201ENST00000334731 TMEM87BQ96K49 555 aa13□□□□□ -0.33
C9orf85-201ENST00000334731 RNPC3Q96LT9 517 aaKnown RBP13□□□□□ -0.33
C9orf85-201ENST00000334731 PDCD2LQ9BRP1 358 aa13□□□□□ -0.33
C9orf85-201ENST00000334731 PPP1R12CQ9BZL4 782 aa13□□□□□ -0.33
C9orf85-201ENST00000334731 ALDH8A1Q9H2A2 487 aaPredicted RBP13□□□□□ -0.33
C9orf85-201ENST00000334731 DDX41Q9UJV9 622 aaKnown RBP13□□□□□ -0.33
C9orf85-201ENST00000334731 GCOM1H8Y6P7 765 aaPredicted RBP12.99□□□□□ -0.33
C9orf85-201ENST00000334731 GH1P01241 217 aa12.99□□□□□ -0.33
C9orf85-201ENST00000334731 POLR2MP0CAP2 368 aa12.99□□□□□ -0.33
C9orf85-201ENST00000334731 SMARCA1P28370 1054 aa12.99□□□□□ -0.33
C9orf85-201ENST00000334731 KIF5BP33176 963 aa12.99□□□□□ -0.33
C9orf85-201ENST00000334731 LIFRP42702 1097 aa12.99□□□□□ -0.33
C9orf85-201ENST00000334731 SMAD3P84022 425 aaKnown RBP12.99□□□□□ -0.33
C9orf85-201ENST00000334731 ARHGAP1Q07960 439 aa12.99□□□□□ -0.33
C9orf85-201ENST00000334731 PPIGQ13427 754 aaKnown RBP eCLIP12.99□□□□□ -0.33
C9orf85-201ENST00000334731 NBPF20Q3BBV1 942 aa12.99□□□□□ -0.33
C9orf85-201ENST00000334731 VSIG10LQ86VR7 867 aa12.99□□□□□ -0.33
C9orf85-201ENST00000334731 CTCFLQ8NI51 663 aaPredicted RBP12.99□□□□□ -0.33
C9orf85-201ENST00000334731 AFG1LQ8WV93 481 aa12.99□□□□□ -0.33
C9orf85-201ENST00000334731 PIBF1Q8WXW3 757 aa12.99□□□□□ -0.33
C9orf85-201ENST00000334731 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.99□□□□□ -0.33
C9orf85-201ENST00000334731 LZTS2Q9BRK4 669 aa12.99□□□□□ -0.33
C9orf85-201ENST00000334731 NOC4LQ9BVI4 516 aaKnown RBP12.99□□□□□ -0.33
C9orf85-201ENST00000334731 SPZ1Q9BXG8 430 aa12.99□□□□□ -0.33
C9orf85-201ENST00000334731 HIPK3Q9H422 1215 aa12.99□□□□□ -0.33
C9orf85-201ENST00000334731 UMODL1Q5DID0 1318 aa12.98□□□□□ -0.33
C9orf85-201ENST00000334731 CCDC69A6NI79 296 aa12.98□□□□□ -0.33
C9orf85-201ENST00000334731 RGS20O76081 388 aa12.98□□□□□ -0.33
C9orf85-201ENST00000334731 ACRP10323 421 aa12.98□□□□□ -0.33
C9orf85-201ENST00000334731 MYCLP12524 364 aaPredicted RBP12.98□□□□□ -0.33
C9orf85-201ENST00000334731 TMEM240Q5SV17 173 aa12.98□□□□□ -0.33
C9orf85-201ENST00000334731 NFXL1Q6ZNB6 911 aa12.98□□□□□ -0.33
C9orf85-201ENST00000334731 TRMT13Q9NUP7 481 aaKnown RBP12.98□□□□□ -0.33
C9orf85-201ENST00000334731 CDC45O75419 566 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 PLEKHA8P1O95397 391 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 MMP3P08254 477 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 SUPT20HL2P0C7V6 817 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 RXRAP19793 462 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 GNAQP50148 359 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 PGM5Q15124 567 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 RASIP1Q5U651 963 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 RNF20Q5VTR2 975 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 NFRKBQ6P4R8 1299 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 ZNF365Q70YC5 407 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 FCHSD1Q86WN1 690 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 CMTR1Q8N1G2 835 aaKnown RBP12.97□□□□□ -0.33
C9orf85-201ENST00000334731 SRBD1Q8N5C6 995 aaKnown RBP12.97□□□□□ -0.33
C9orf85-201ENST00000334731 IL31RAQ8NI17 732 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 PPP1R13LQ8WUF5 828 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 EMID1Q96A84 441 aaPredicted RBP12.97□□□□□ -0.33
C9orf85-201ENST00000334731 RRP36Q96EU6 259 aaKnown RBP12.97□□□□□ -0.33
C9orf85-201ENST00000334731 CCDC136Q96JN2 1154 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 FAM161BQ96MY7 647 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 LRRC2Q9BYS8 371 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 SEMA6BQ9H3T3 888 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 IL23AQ9NPF7 189 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 STXBP5LQ9Y2K9 1186 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 SLC12A7Q9Y666 1083 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 MRVI1Q9Y6F6 885 aa12.97□□□□□ -0.33
C9orf85-201ENST00000334731 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.96□□□□□ -0.33
C9orf85-201ENST00000334731 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.96□□□□□ -0.33
C9orf85-201ENST00000334731 CALM1P0DP23 149 aa12.96□□□□□ -0.33
C9orf85-201ENST00000334731 CALM2P0DP24 149 aa12.96□□□□□ -0.33
C9orf85-201ENST00000334731 CALM3P0DP25 149 aa12.96□□□□□ -0.33
C9orf85-201ENST00000334731 CYP2C9P11712 490 aa12.96□□□□□ -0.33
C9orf85-201ENST00000334731 CASTP20810 708 aaKnown RBP12.96□□□□□ -0.33
C9orf85-201ENST00000334731 CCND2P30279 289 aa12.96□□□□□ -0.33
C9orf85-201ENST00000334731 CCL23P55773 120 aa12.96□□□□□ -0.33
C9orf85-201ENST00000334731 EXOSC10Q01780 885 aaKnown RBP12.96□□□□□ -0.33
C9orf85-201ENST00000334731 PTPN11Q06124 597 aaPredicted RBP12.96□□□□□ -0.33
C9orf85-201ENST00000334731 LAMC2Q13753 1193 aa12.96□□□□□ -0.33
C9orf85-201ENST00000334731 TSGA10IPQ3SY00 556 aa12.96□□□□□ -0.33
C9orf85-201ENST00000334731 FAM47CQ5HY64 1035 aa12.96□□□□□ -0.33
C9orf85-201ENST00000334731 ZNF697Q5TEC3 545 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms