RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 TEX12Q9BXU0 123 aa18.03■□□□□ 0.48
PDZD8-201ENST00000334464 TNKSO95271 1327 aa18.03■□□□□ 0.48
PDZD8-201ENST00000334464 USP17L12C9JPN9 530 aa18.03■□□□□ 0.48
PDZD8-201ENST00000334464 USP17L21D6R901 530 aa18.03■□□□□ 0.48
PDZD8-201ENST00000334464 BAG6P46379 1132 aa18.03■□□□□ 0.48
PDZD8-201ENST00000334464 SAMD9Q5K651 1589 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 PLEKHG1Q9ULL1 1385 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 ARL4AP40617 200 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 PSMD2Q13200 908 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 NDUFAF2Q8N183 169 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 FNBP4Q8N3X1 1017 aaPredicted RBP18.02■□□□□ 0.48
PDZD8-201ENST00000334464 ACCSQ96QU6 501 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 SERTAD1Q9UHV2 236 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 LRRD1A4D1F6 860 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 SUGCTQ9HAC7 445 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 CARMIL3Q8ND23 1372 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 PCCAP05165 728 aaPredicted RBP18.02■□□□□ 0.48
PDZD8-201ENST00000334464 EP400NLQ6ZTU2 488 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 GCNAQ96QF7 691 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 SPECC1L-ADORA2AF8WAN1 911 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 ABL1P00519 1130 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 LRRC8AQ8IWT6 810 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 SSH3Q8TE77 659 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 LEMD3Q9Y2U8 911 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 NUB1Q9Y5A7 615 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 CDC42BPBQ9Y5S2 1711 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 EFCAB6Q5THR3 1501 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 ZSWIM6Q9HCJ5 1215 aa18.02■□□□□ 0.48
PDZD8-201ENST00000334464 PPP6R2O75170 966 aa18.02■□□□□ 0.47
PDZD8-201ENST00000334464 CUL1Q13616 776 aa18.02■□□□□ 0.47
PDZD8-201ENST00000334464 TAF11Q15544 211 aa18.02■□□□□ 0.47
PDZD8-201ENST00000334464 KIFC3Q9BVG8 833 aa18.02■□□□□ 0.47
PDZD8-201ENST00000334464 SPHKAPQ2M3C7 1700 aa18.02■□□□□ 0.47
PDZD8-201ENST00000334464 RPAP1Q9BWH6 1393 aaPredicted RBP18.02■□□□□ 0.47
PDZD8-201ENST00000334464 PTGDRQ13258 359 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 AP5M1Q9H0R1 490 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 XAB2Q9HCS7 855 aaKnown RBP18.01■□□□□ 0.47
PDZD8-201ENST00000334464 BAG2O95816 211 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 NR2F2P24468 414 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 GADL1Q6ZQY3 521 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 INTS9Q9NV88 658 aaKnown RBP18.01■□□□□ 0.47
PDZD8-201ENST00000334464 GCNT4Q9P109 453 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 PYGLP06737 847 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 FKBP3Q00688 224 aaKnown RBP18.01■□□□□ 0.47
PDZD8-201ENST00000334464 TRIM68Q6AZZ1 485 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 TTBK2Q6IQ55 1244 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 C4orf50Q6ZRC1 276 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 PAGR1Q9BTK6 254 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 SLC38A10Q9HBR0 1119 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 MYH10P35580 1976 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 RNF169Q8NCN4 708 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 TUBGCP2Q9BSJ2 902 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 ANXA13P27216 316 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 IFNA8P32881 189 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 ECEL1O95672 775 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 POLR2FP61218 127 aaKnown RBP18.01■□□□□ 0.47
PDZD8-201ENST00000334464 IGBP1P78318 339 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 CNOT6LQ96LI5 555 aaKnown RBP18.01■□□□□ 0.47
PDZD8-201ENST00000334464 EIF3DO15371 548 aaKnown RBP eCLIP18.01■□□□□ 0.47
PDZD8-201ENST00000334464 TET3O43151 1660 aa18.01■□□□□ 0.47
PDZD8-201ENST00000334464 PMLP29590 882 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 STAT2P52630 851 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 NR1H3Q13133 447 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 SYMPKQ92797 1274 aaKnown RBP18■□□□□ 0.47
PDZD8-201ENST00000334464 GSTA4O15217 222 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 PTPRTO14522 1441 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 PZPP20742 1482 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 IKBKBO14920 756 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 ZNF500O60304 480 aaPredicted RBP18■□□□□ 0.47
PDZD8-201ENST00000334464 JAK2O60674 1132 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 AFPP02771 609 aaKnown RBP18■□□□□ 0.47
PDZD8-201ENST00000334464 PAMP19021 973 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 MAPK4P31152 587 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 SUPT20HL1Q3ZLR7 823 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 ARMCX2Q7L311 632 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 G2E3Q7L622 706 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 DHX36Q9H2U1 1008 aaKnown RBP18■□□□□ 0.47
PDZD8-201ENST00000334464 ACTN1P12814 892 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 ALS2CLQ60I27 953 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 FBXO18Q8NFZ0 1043 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 NUDCD1Q96RS6 583 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 SEPT9Q9UHD8 586 aaPredicted RBP18■□□□□ 0.47
PDZD8-201ENST00000334464 PNMA6EA0A0J9YXQ4 647 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 HSPD1P10809 573 aaKnown RBP18■□□□□ 0.47
PDZD8-201ENST00000334464 OSBPP22059 807 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 MSH2P43246 934 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 COPB1P53618 953 aaKnown RBP18■□□□□ 0.47
PDZD8-201ENST00000334464 GTF2IP78347 998 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 EAPPQ56P03 285 aaPredicted RBP18■□□□□ 0.47
PDZD8-201ENST00000334464 ATP6V1E2Q96A05 226 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 KANSL2Q9H9L4 492 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 DAAM1Q9Y4D1 1078 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 SGO2Q562F6 1265 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 RDH13Q8NBN7 331 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 ANGPTL2Q9UKU9 493 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 PCDHA4Q9UN74 947 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 GPR108Q9NPR9 543 aa18■□□□□ 0.47
PDZD8-201ENST00000334464 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18■□□□□ 0.472e-6■□□□□ 10.8
PDZD8-201ENST00000334464 PACSIN2Q9UNF0 486 aaPredicted RBP18■□□□□ 0.47
PDZD8-201ENST00000334464 KRT24Q2M2I5 525 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms