RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 EGFL6Q8IUX8 553 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 CLHC1Q8NHS4 586 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 KPNA4O00629 521 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 CASC3O15234 703 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 GYG2O15488 501 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 XRCC5P13010 732 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 PIK3CAP42336 1068 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 PSMC6P62333 389 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 MRPS9P82933 396 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 OR9Q1Q8NGQ5 310 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 NUP58Q9BVL2 599 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 TMEM245Q9H330 911 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 SYTL2Q9HCH5 934 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 KLHL1Q9NR64 748 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 FPGT-TNNI3KV9GXZ4 949 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 OSBPP22059 807 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 PTPN5P54829 565 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 DEPDC1Q5TB30 811 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 FAM81AQ8TBF8 368 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 COG3Q96JB2 828 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 TBATAQ96M53 351 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 CARD10Q9BWT7 1032 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 SLC24A3Q9HC58 644 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 DDX19BQ9UMR2 479 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 AP4S1Q9Y587 144 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 ANKRD30BQ9BXX2 1392 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 CSE1LP55060 971 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 ARF5P84085 180 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 KLHL40Q2TBA0 621 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 NOP9Q86U38 636 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 GIPC2Q8TF65 315 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 DPH5Q9H2P9 285 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 MYH6P13533 1939 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 ZBBXA8MT70 800 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 SARSP49591 514 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 THOC5Q13769 683 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 RIN3Q8TB24 985 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 IMPG2Q9BZV3 1241 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 AP1M2Q9Y6Q5 423 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 ZNF518AQ6AHZ1 1483 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 CCDC141Q6ZP82 1450 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 MUSKO15146 869 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 MYL3P08590 195 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 MAGEA8P43361 318 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 SLC6A15Q9H2J7 730 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 KDM4CQ9H3R0 1056 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 EIF3HO15372 352 aaKnown RBP eCLIP6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 APOL3O95236 402 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 MX1P20591 662 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 CASP14P31944 242 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 HDLBPQ00341 1268 aaKnown RBP6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 RAB3GAP1Q15042 981 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 MARCH10Q8NA82 808 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 BRIP1Q9BX63 1249 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 BAG5Q9UL15 447 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 E7EVH7 732 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 TIPRLO75663 272 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 NPR2P20594 1047 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 SSFA2P28290 1259 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 CYP4A11Q02928 519 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 ADCY2Q08462 1091 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 MYO1EQ12965 1108 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 EMC2Q15006 297 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 TRIM16LQ309B1 348 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 CYP4A22Q5TCH4 519 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 BMP2KQ9NSY1 1161 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 AIPL1Q9NZN9 384 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 K7ELQ4 463 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 CYP19A1P11511 503 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 FDPSP14324 419 aaKnown RBP6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 VAV1P15498 845 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 PNPT1Q8TCS8 783 aaKnown RBP6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 CCDC42Q96M95 316 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 UGGT2Q9NYU1 1516 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 RGS10O43665 173 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 PAX3P23760 479 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 IL12RB1P42701 662 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 MTA1Q13330 715 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 CAVIN4Q5BKX8 364 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 BRAPQ7Z569 592 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 USP48Q86UV5 1035 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 EIF4G3O43432 1585 aaKnown RBP6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 PECAM1P16284 738 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 PLD3Q8IV08 490 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 CCDC12Q8WUD4 166 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 LRRC39Q96DD0 335 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 LRRC2Q9BYS8 371 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 LRRC27Q9C0I9 530 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 ABCG8Q9H221 673 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 ARHGEF37A1IGU5 675 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 TLR3O15455 904 aaKnown RBP6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 F8A1P23610 371 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 PGDP52209 483 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 SEMA3FQ13275 785 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 RABGEF1Q9UJ41 708 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 DCTN3O75935 186 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 IFNA16P05015 189 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 GLMNQ92990 594 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 DGCR14Q96DF8 476 aaKnown RBP6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 AP1S3Q96PC3 154 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms