RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 SLC15A5A6NIM6 579 aa18.79■□□□□ 0.6
SHOX-201ENST00000334060 MARCKSP29966 332 aaPredicted RBP18.79■□□□□ 0.6
SHOX-201ENST00000334060 CYP2C19P33261 490 aa18.79■□□□□ 0.6
SHOX-201ENST00000334060 MAP2K5Q13163 448 aa18.79■□□□□ 0.6
SHOX-201ENST00000334060 PRR16Q569H4 304 aa18.79■□□□□ 0.6
SHOX-201ENST00000334060 C4orf32Q8N8J7 132 aa18.79■□□□□ 0.6
SHOX-201ENST00000334060 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.79■□□□□ 0.6
SHOX-201ENST00000334060 SAGE1Q9NXZ1 904 aa18.79■□□□□ 0.6
SHOX-201ENST00000334060 BAG4O95429 457 aaKnown RBP18.79■□□□□ 0.6
SHOX-201ENST00000334060 SNAI1O95863 264 aaPredicted RBP18.79■□□□□ 0.6
SHOX-201ENST00000334060 ELNP15502 786 aa18.79■□□□□ 0.6
SHOX-201ENST00000334060 FCGRTP55899 365 aa18.79■□□□□ 0.6
SHOX-201ENST00000334060 GJC2Q5T442 439 aaPredicted RBP18.79■□□□□ 0.6
SHOX-201ENST00000334060 VSIG10LQ86VR7 867 aa18.79■□□□□ 0.6
SHOX-201ENST00000334060 NSUN6Q8TEA1 469 aaKnown RBP18.79■□□□□ 0.6
SHOX-201ENST00000334060 TRIB2Q92519 343 aa18.79■□□□□ 0.6
SHOX-201ENST00000334060 LENG1Q96BZ8 264 aaPredicted RBP18.79■□□□□ 0.6
SHOX-201ENST00000334060 PNMA2Q9UL42 364 aa18.79■□□□□ 0.6
SHOX-201ENST00000334060 ZNF236Q9UL36 1845 aa18.78■□□□□ 0.6
SHOX-201ENST00000334060 ADCY6O43306 1168 aa18.78■□□□□ 0.6
SHOX-201ENST00000334060 ATP9AO75110 1047 aa18.78■□□□□ 0.6
SHOX-201ENST00000334060 ARIH2O95376 493 aa18.78■□□□□ 0.6
SHOX-201ENST00000334060 EDNRBP24530 442 aa18.78■□□□□ 0.6
SHOX-201ENST00000334060 COPB2P35606 906 aa18.78■□□□□ 0.6
SHOX-201ENST00000334060 ARMCX2Q7L311 632 aa18.78■□□□□ 0.6
SHOX-201ENST00000334060 FAM177A1Q8N128 213 aaPredicted RBP18.78■□□□□ 0.6
SHOX-201ENST00000334060 JMYQ8N9B5 988 aa18.78■□□□□ 0.6
SHOX-201ENST00000334060 DOCK5Q9H7D0 1870 aa18.78■□□□□ 0.6
SHOX-201ENST00000334060 STRNO43815 780 aa18.77■□□□□ 0.6
SHOX-201ENST00000334060 FKTNO75072 461 aa18.77■□□□□ 0.6
SHOX-201ENST00000334060 FOSP01100 380 aaPredicted RBP18.77■□□□□ 0.6
SHOX-201ENST00000334060 HSPA1AP0DMV8 641 aaKnown RBP18.77■□□□□ 0.6
SHOX-201ENST00000334060 HSPA1BP0DMV9 641 aaKnown RBP18.77■□□□□ 0.6
SHOX-201ENST00000334060 IRX5P78411 483 aaPredicted RBP18.77■□□□□ 0.6
SHOX-201ENST00000334060 SP2Q02086 613 aa18.77■□□□□ 0.6
SHOX-201ENST00000334060 ANO1Q5XXA6 986 aa18.77■□□□□ 0.6
SHOX-201ENST00000334060 HAS1Q92839 578 aa18.77■□□□□ 0.6
SHOX-201ENST00000334060 CLIC6Q96NY7 704 aa18.77■□□□□ 0.6
SHOX-201ENST00000334060 NUDT12Q9BQG2 462 aa18.77■□□□□ 0.6
SHOX-201ENST00000334060 BEGAINQ9BUH8 593 aa18.77■□□□□ 0.6
SHOX-201ENST00000334060 DNAH12Q6ZR08 3092 aa18.77■□□□□ 0.6
SHOX-201ENST00000334060 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.77■□□□□ 0.59
SHOX-201ENST00000334060 RBAK-RBAKDNI3L0D1 243 aa18.77■□□□□ 0.59
SHOX-201ENST00000334060 PTGDRQ13258 359 aa18.77■□□□□ 0.59
SHOX-201ENST00000334060 SPECC1Q5M775 1068 aa18.77■□□□□ 0.59
SHOX-201ENST00000334060 PCNX4Q63HM2 1172 aa18.77■□□□□ 0.59
SHOX-201ENST00000334060 SEPT14Q6ZU15 432 aa18.77■□□□□ 0.59
SHOX-201ENST00000334060 ABRAQ8N0Z2 381 aa18.77■□□□□ 0.59
SHOX-201ENST00000334060 KATNBL1Q9H079 304 aa18.77■□□□□ 0.59
SHOX-201ENST00000334060 GLT8D2Q9H1C3 349 aa18.77■□□□□ 0.59
SHOX-201ENST00000334060 DDX25Q9UHL0 483 aaKnown RBP18.77■□□□□ 0.59
SHOX-201ENST00000334060 HSPA8P11142 646 aaKnown RBP18.76■□□□□ 0.59
SHOX-201ENST00000334060 RILPL1Q5EBL4 403 aa18.76■□□□□ 0.59
SHOX-201ENST00000334060 COPS5Q92905 334 aa18.76■□□□□ 0.59
SHOX-201ENST00000334060 UBIAD1Q9Y5Z9 338 aa18.76■□□□□ 0.59
SHOX-201ENST00000334060 MKI67P46013 3256 aaKnown RBP18.75■□□□□ 0.59
SHOX-201ENST00000334060 MSH4O15457 936 aa18.75■□□□□ 0.59
SHOX-201ENST00000334060 CYP3A4P08684 503 aa18.75■□□□□ 0.59
SHOX-201ENST00000334060 CDC25AP30304 524 aa18.75■□□□□ 0.59
SHOX-201ENST00000334060 LBX1P52954 281 aa18.75■□□□□ 0.59
SHOX-201ENST00000334060 LINC00301Q8NCQ3 95 aa18.75■□□□□ 0.59
SHOX-201ENST00000334060 DNERQ8NFT8 737 aa18.75■□□□□ 0.59
SHOX-201ENST00000334060 MAP3K20Q9NYL2 800 aaKnown RBP18.75■□□□□ 0.59
SHOX-201ENST00000334060 POTEFA5A3E0 1075 aa18.75■□□□□ 0.59
SHOX-201ENST00000334060 PP2D1A8MPX8 630 aa18.75■□□□□ 0.59
SHOX-201ENST00000334060 GADD45BO75293 160 aaPredicted RBP18.75■□□□□ 0.59
SHOX-201ENST00000334060 IGHA2P01877 340 aa18.75■□□□□ 0.59
SHOX-201ENST00000334060 CIITAP33076 1130 aa18.75■□□□□ 0.59
SHOX-201ENST00000334060 ITGB3BPQ13352 177 aaPredicted RBP18.75■□□□□ 0.59
SHOX-201ENST00000334060 CEP55Q53EZ4 464 aa18.75■□□□□ 0.59
SHOX-201ENST00000334060 OTOP1Q7RTM1 612 aa18.75■□□□□ 0.59
SHOX-201ENST00000334060 TRPV1Q8NER1 839 aa18.75■□□□□ 0.59
SHOX-201ENST00000334060 LEO1Q8WVC0 666 aaPredicted RBP18.75■□□□□ 0.59
SHOX-201ENST00000334060 MBOAT7Q96N66 472 aa18.75■□□□□ 0.59
SHOX-201ENST00000334060 MXRA8Q9BRK3 442 aa18.75■□□□□ 0.59
SHOX-201ENST00000334060 SRRDQ9UH36 339 aa18.75■□□□□ 0.59
SHOX-201ENST00000334060 TRIM17Q9Y577 477 aa18.75■□□□□ 0.59
SHOX-201ENST00000334060 KIAA1217Q5T5P2 1943 aa18.75■□□□□ 0.59
SHOX-201ENST00000334060 DDX39AO00148 427 aaKnown RBP18.74■□□□□ 0.59
SHOX-201ENST00000334060 ZNF76P36508 570 aa18.74■□□□□ 0.59
SHOX-201ENST00000334060 NASPP49321 788 aaPredicted RBP18.74■□□□□ 0.59
SHOX-201ENST00000334060 USP49Q70CQ1 688 aa18.74■□□□□ 0.59
SHOX-201ENST00000334060 PLA2G4DQ86XP0 818 aa18.74■□□□□ 0.59
SHOX-201ENST00000334060 ETNPPLQ8TBG4 499 aa18.74■□□□□ 0.59
SHOX-201ENST00000334060 APBA2Q99767 749 aa18.74■□□□□ 0.59
SHOX-201ENST00000334060 KCNH7Q9NS40 1196 aa18.74■□□□□ 0.59
SHOX-201ENST00000334060 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.74■□□□□ 0.59
SHOX-201ENST00000334060 MEIS1O00470 390 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 NEMFO60524 1076 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 HOXC6P09630 235 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 CCND2P30279 289 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 USP11P51784 963 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 PDE4DQ08499 809 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 LY6KQ17RY6 165 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 INPP4AQ96PE3 977 aaPredicted RBP18.73■□□□□ 0.59
SHOX-201ENST00000334060 TINF2Q9BSI4 451 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 NOL7Q9UMY1 257 aaKnown RBP18.73■□□□□ 0.59
SHOX-201ENST00000334060 PTCH2Q9Y6C5 1203 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 CYP3A7-CYP3A51PA0A087WV96 503 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 MYCP01106 439 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms