RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 LRRC55Q6ZSA7 311 aa14.93□□□□□ -0.02
TUBA1B-201ENST00000332858 DRC1Q96MC2 740 aa14.93□□□□□ -0.02
TUBA1B-201ENST00000332858 FAM196BA6NMK8 535 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 SHMT1P34896 483 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 USP14P54578 494 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 CACNB1Q02641 598 aaPredicted RBP14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 NFIAQ12857 509 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 DOK7Q18PE1 504 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 ASPRV1Q53RT3 343 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 CCDC170Q8IYT3 715 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 TBC1D22AQ8WUA7 517 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 BBXQ8WY36 941 aaPredicted RBP14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 VPS18Q9P253 973 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 PCDHAC2Q9Y5I4 1007 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 USP17L15C9J2P7 530 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 USP17L13C9JLJ4 530 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 USP17L11C9JVI0 530 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 USP17L18D6R9N7 530 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 USP17L22D6RA61 530 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 USP17L17D6RBQ6 530 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 USP17L19D6RCP7 530 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 USP17L20D6RJB6 530 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 ERLIN1O75477 346 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 FAM193AP78312 1265 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 MRPS25P82663 173 aaKnown RBP14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 APBA1Q02410 837 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 EHHADHQ08426 723 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 USP17L24Q0WX57 530 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 COBLL1Q53SF7 1204 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 USP17L6PQ6QN14 398 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 GSPT2Q8IYD1 628 aaKnown RBP14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 PURBQ96QR8 312 aaKnown RBP14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 USP40Q9NVE5 1235 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 STK17AQ9UEE5 414 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 SERPINB13Q9UIV8 391 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 MYH7BA7E2Y1 1941 aa14.92□□□□□ -0.02
TUBA1B-201ENST00000332858 PVALEFA0A1B0GWK0 134 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 LRRC53A6NM62 1247 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 RAD21O60216 631 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 TTLL1O95922 423 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 MYBL2P10244 700 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 EIF4A3P38919 411 aaKnown RBP14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 RAD51AP2Q09MP3 1159 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 CCDC96Q2M329 555 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 TMEM266Q2M3C6 531 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 FIGNQ5HY92 759 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 KRT79Q5XKE5 535 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 RRAGAQ7L523 313 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 SLF2Q8IX21 1173 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 GUF1Q8N442 669 aaKnown RBP14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 ANKRD13CQ8N6S4 541 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 DNAJC19Q96DA6 116 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 RIC8AQ9NPQ8 531 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 JADE2Q9NQC1 790 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 SALL4Q9UJQ4 1053 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 PNMA6FA0A0J9YX94 578 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 NPHP3-ACAD11A0A0J9YXS1 232 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 A0A1W2PQJ5 194 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 MPHOSPH10O00566 681 aaKnown RBP14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 CLK2P49760 499 aaKnown RBP14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 VAV2P52735 878 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 PDIA5Q14554 519 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 ZNF662Q6ZS27 426 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 PSMB7Q99436 277 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 KCNQ5Q9NR82 932 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 DDX25Q9UHL0 483 aaKnown RBP14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 FAN1Q9Y2M0 1017 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 E9PMD0 336 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 IPO7O95373 1038 aaKnown RBP14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 SSBP05455 408 aaKnown RBP eCLIP14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 HOXA10P31260 410 aaPredicted RBP14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 CACNB3P54284 484 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 KIF5AQ12840 1032 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 TMEM119Q4V9L6 283 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 WDR93Q6P2C0 686 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 SMARCAL1Q9NZC9 954 aa14.91□□□□□ -0.02
TUBA1B-201ENST00000332858 MOCS3O95396 460 aa14.9□□□□□ -0.02
TUBA1B-201ENST00000332858 KIF11P52732 1056 aa14.9□□□□□ -0.02
TUBA1B-201ENST00000332858 KCNMA1Q12791 1236 aa14.9□□□□□ -0.02
TUBA1B-201ENST00000332858 COG1Q8WTW3 980 aa14.9□□□□□ -0.02
TUBA1B-201ENST00000332858 BAP1Q92560 729 aa14.9□□□□□ -0.02
TUBA1B-201ENST00000332858 PCDHA13Q9Y5I0 950 aa14.9□□□□□ -0.02
TUBA1B-201ENST00000332858 PLIN4Q96Q06 1357 aa14.9□□□□□ -0.02
TUBA1B-201ENST00000332858 UBAP1LF5GYI3 381 aa14.9□□□□□ -0.02
TUBA1B-201ENST00000332858 POLRMTO00411 1230 aaKnown RBP14.9□□□□□ -0.02
TUBA1B-201ENST00000332858 HNRNPH3P31942 346 aaKnown RBP14.9□□□□□ -0.02
TUBA1B-201ENST00000332858 C2orf54Q08AI8 447 aa14.9□□□□□ -0.02
TUBA1B-201ENST00000332858 MAN2A1Q16706 1144 aa14.9□□□□□ -0.02
TUBA1B-201ENST00000332858 SECISBP2LQ93073 1101 aaKnown RBP14.9□□□□□ -0.02
TUBA1B-201ENST00000332858 IFIH1Q9BYX4 1025 aaKnown RBP14.9□□□□□ -0.02
TUBA1B-201ENST00000332858 EHD2Q9NZN4 543 aa14.9□□□□□ -0.02
TUBA1B-201ENST00000332858 SRCAPQ6ZRS2 3230 aa14.9□□□□□ -0.02
TUBA1B-201ENST00000332858 CCDC66A2RUB6 948 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 CXCR5P32302 372 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 LMAN1P49257 510 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 CDK17Q00537 523 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 ORC2Q13416 577 aaPredicted RBP14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 EZH2Q15910 746 aaKnown RBP14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 CDC42EP5Q6NZY7 148 aa14.89□□□□□ -0.03
TUBA1B-201ENST00000332858 GJD4Q96KN9 370 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms