RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 ANO1Q5XXA6 986 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 IQSEC1Q6DN90 963 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 SLC30A10Q6XR72 485 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 STAG2Q8N3U4 1231 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 NSUN6Q8TEA1 469 aaKnown RBP11.18□□□□□ -0.62
SYN3-201ENST00000332840 IWS1Q96ST2 819 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 GDF15Q99988 308 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 SPZ1Q9BXG8 430 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 KATNBL1Q9H079 304 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 UPF3AQ9H1J1 476 aaKnown RBP11.18□□□□□ -0.62
SYN3-201ENST00000332840 CPVLQ9H3G5 476 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 VAT1LQ9HCJ6 419 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 PRKAG2Q9UGJ0 569 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 SEC63Q9UGP8 760 aaKnown RBP11.18□□□□□ -0.62
SYN3-201ENST00000332840 PCDHA1Q9Y5I3 950 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 LTBP2Q14767 1821 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 SMCHD1A6NHR9 2005 aa11.18□□□□□ -0.62
SYN3-201ENST00000332840 A0A1W2PPC1 479 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 H3BQV1 296 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 NKRFO15226 690 aaKnown RBP eCLIP11.17□□□□□ -0.62
SYN3-201ENST00000332840 ZEB2O60315 1214 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 CABYRO75952 493 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 C6orf222P0C671 652 aaPredicted RBP11.17□□□□□ -0.62
SYN3-201ENST00000332840 EDNRBP24530 442 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 ADCYAP1R1P41586 468 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 GJA9P57773 515 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 NKX3-2P78367 333 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 GHRHRQ02643 423 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 LRRC26Q2I0M4 334 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 SKOR2Q2VWA4 1001 aaPredicted RBP11.17□□□□□ -0.62
SYN3-201ENST00000332840 BRDTQ58F21 947 aaPredicted RBP11.17□□□□□ -0.62
SYN3-201ENST00000332840 MCTP1Q6DN14 999 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 MICU3Q86XE3 530 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 HOMER1Q86YM7 354 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 SCFD2Q8WU76 684 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 RRP36Q96EU6 259 aaKnown RBP11.17□□□□□ -0.62
SYN3-201ENST00000332840 GLT1D1Q96MS3 346 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 FAM161BQ96MY7 647 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 COL25A1Q9BXS0 654 aaPredicted RBP11.17□□□□□ -0.62
SYN3-201ENST00000332840 SEZ6LQ9BYH1 1024 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 AP5M1Q9H0R1 490 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 SENP2Q9HC62 589 aa11.17□□□□□ -0.62
SYN3-201ENST00000332840 ASTN1O14525 1302 aa11.16□□□□□ -0.62
SYN3-201ENST00000332840 ELP1O95163 1332 aa11.16□□□□□ -0.62
SYN3-201ENST00000332840 A0A1W2PQ45 241 aaPredicted RBP11.16□□□□□ -0.62
SYN3-201ENST00000332840 A0A1W2PQY0 241 aa11.16□□□□□ -0.62
SYN3-201ENST00000332840 DTNBO60941 627 aa11.16□□□□□ -0.62
SYN3-201ENST00000332840 ADD1P35611 737 aaKnown RBP11.16□□□□□ -0.62
SYN3-201ENST00000332840 HSD17B4P51659 736 aa11.16□□□□□ -0.62
SYN3-201ENST00000332840 ACLYP53396 1101 aa11.16□□□□□ -0.62
SYN3-201ENST00000332840 SNX17Q15036 470 aa11.16□□□□□ -0.62
SYN3-201ENST00000332840 RTN1Q16799 776 aa11.16□□□□□ -0.62
SYN3-201ENST00000332840 TLK2Q86UE8 772 aa11.16□□□□□ -0.62
SYN3-201ENST00000332840 RAB11FIP4Q86YS3 637 aa11.16□□□□□ -0.62
SYN3-201ENST00000332840 TEX2Q8IWB9 1127 aa11.16□□□□□ -0.62
SYN3-201ENST00000332840 FBXO16Q8IX29 292 aaPredicted RBP11.16□□□□□ -0.62
SYN3-201ENST00000332840 KLHDC9Q8NEP7 349 aa11.16□□□□□ -0.62
SYN3-201ENST00000332840 SYTL5Q8TDW5 730 aaPredicted RBP11.16□□□□□ -0.62
SYN3-201ENST00000332840 PIGSQ96S52 555 aa11.16□□□□□ -0.62
SYN3-201ENST00000332840 RMDN3Q96TC7 470 aa11.16□□□□□ -0.62
SYN3-201ENST00000332840 UBE2OQ9C0C9 1292 aaKnown RBP11.16□□□□□ -0.62
SYN3-201ENST00000332840 RBM28Q9NW13 759 aaKnown RBP11.16□□□□□ -0.62
SYN3-201ENST00000332840 ORC3Q9UBD5 711 aaPredicted RBP11.16□□□□□ -0.62
SYN3-201ENST00000332840 MROH7Q68CQ1 1323 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 COL11A1P12107 1806 aaPredicted RBP11.15□□□□□ -0.62
SYN3-201ENST00000332840 GCOM1H8Y6P7 765 aaPredicted RBP11.15□□□□□ -0.62
SYN3-201ENST00000332840 CFBP00751 764 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 POLR2MP0CAP2 368 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 FDPSP14324 419 aaKnown RBP11.15□□□□□ -0.62
SYN3-201ENST00000332840 IFNAR1P17181 557 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 RXRAP19793 462 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 CDC27P30260 824 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 CPT1AP50416 773 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 ATN1P54259 1190 aaPredicted RBP11.15□□□□□ -0.62
SYN3-201ENST00000332840 RTP1P59025 263 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 MDM2Q00987 491 aaPredicted RBP11.15□□□□□ -0.62
SYN3-201ENST00000332840 SSRP1Q08945 709 aaKnown RBP11.15□□□□□ -0.62
SYN3-201ENST00000332840 STXBP2Q15833 593 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 FSCN1Q16658 493 aaKnown RBP11.15□□□□□ -0.62
SYN3-201ENST00000332840 DUSP28Q4G0W2 176 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 GNASQ5JWF2 1037 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 ARHGEF16Q5VV41 709 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 TAPT1Q6NXT6 567 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 SLC39A5Q6ZMH5 540 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 FANCBQ8NB91 859 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 LBHD1Q9BQE6 289 aaPredicted RBP11.15□□□□□ -0.62
SYN3-201ENST00000332840 WDR11Q9BZH6 1224 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 ZSCAN16Q9H4T2 348 aaPredicted RBP11.15□□□□□ -0.62
SYN3-201ENST00000332840 STARD7Q9NQZ5 370 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 FAM217BQ9NTX9 383 aaPredicted RBP11.15□□□□□ -0.62
SYN3-201ENST00000332840 MTMR10Q9NXD2 777 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 GNEQ9Y223 722 aaKnown RBP11.15□□□□□ -0.62
SYN3-201ENST00000332840 ATP11BQ9Y2G3 1177 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 TCHHQ07283 1943 aa11.15□□□□□ -0.62
SYN3-201ENST00000332840 STK36Q9NRP7 1315 aa11.14□□□□□ -0.63
SYN3-201ENST00000332840 RBM47A0AV96 593 aaKnown RBP11.14□□□□□ -0.63
SYN3-201ENST00000332840 CYTH3O43739 400 aa11.14□□□□□ -0.63
SYN3-201ENST00000332840 TRAK2O60296 914 aa11.14□□□□□ -0.63
SYN3-201ENST00000332840 EIF3JO75822 258 aaKnown RBP11.14□□□□□ -0.63
SYN3-201ENST00000332840 SMPD1P17405 629 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms