RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 CCDC134Q9H6E4 229 aa9.77□□□□□ -0.85
CPNE8-201ENST00000331366 BTG4Q9NY30 223 aa9.77□□□□□ -0.85
CPNE8-201ENST00000331366 BZW2Q9Y6E2 419 aaKnown RBP9.77□□□□□ -0.85
CPNE8-201ENST00000331366 BRWD3Q6RI45 1802 aa9.77□□□□□ -0.85
CPNE8-201ENST00000331366 ABL1P00519 1130 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 FOSBP53539 338 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 RHBDL3P58872 404 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 Q4G0T1 1027 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 NEK8Q86SG6 692 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 CFAP61Q8NHU2 1237 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 PIK3R5Q8WYR1 880 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 VTI1AQ96AJ9 217 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 BORCS6Q96GS4 357 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 CNOT6LQ96LI5 555 aaKnown RBP9.76□□□□□ -0.85
CPNE8-201ENST00000331366 LRP2BPQ9P2M1 347 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 FRMPD4Q14CM0 1322 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 PDE2AO00408 941 aaPredicted RBP9.76□□□□□ -0.85
CPNE8-201ENST00000331366 ECHS1P30084 290 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 CIITAP33076 1130 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 NONOQ15233 471 aaKnown RBP eCLIP9.76□□□□□ -0.85
CPNE8-201ENST00000331366 KLHDC7AQ5VTJ3 777 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 LRRC57Q8N9N7 239 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 LINC00116Q8NCU8 138 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 PNMA1Q8ND90 353 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 IRX2Q9BZI1 471 aaPredicted RBP9.76□□□□□ -0.85
CPNE8-201ENST00000331366 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.76□□□□□ -0.85
CPNE8-201ENST00000331366 ATRNL1Q5VV63 1379 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 H0YGN5 161 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 MYO1CO00159 1063 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 EIF3HO15372 352 aaKnown RBP eCLIP9.76□□□□□ -0.85
CPNE8-201ENST00000331366 ONECUT3O60422 494 aaPredicted RBP9.76□□□□□ -0.85
CPNE8-201ENST00000331366 SERPING1P05155 500 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 HIBADHP31937 336 aaKnown RBP9.76□□□□□ -0.85
CPNE8-201ENST00000331366 UBXN1Q04323 297 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 KCNMA1Q12791 1236 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 C6orf89Q6UWU4 347 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 C3orf67Q6ZVT6 689 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 AFAP1L1Q8TED9 768 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 SDR42E1Q8WUS8 393 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 CCDC47Q96A33 483 aaKnown RBP9.76□□□□□ -0.85
CPNE8-201ENST00000331366 GDAQ9Y2T3 454 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 PCDHA13Q9Y5I0 950 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 NFS1Q9Y697 457 aa9.76□□□□□ -0.85
CPNE8-201ENST00000331366 USP17L12C9JPN9 530 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 USP17L21D6R901 530 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 MAPK13O15264 365 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 MTA2O94776 668 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 LDHCP07864 332 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 CYP3A4P08684 503 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 DRG2P55039 364 aaKnown RBP9.75□□□□□ -0.85
CPNE8-201ENST00000331366 POU5F1Q01860 360 aaKnown RBP9.75□□□□□ -0.85
CPNE8-201ENST00000331366 ZNF174Q15697 407 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 VPS72Q15906 364 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 ERFEQ4G0M1 354 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 CABP7Q86V35 215 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 CNPY4Q8N129 248 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 SELENOOQ9BVL4 669 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 STRA6Q9BX79 667 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 TLR10Q9BXR5 811 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 RRP15Q9Y3B9 282 aaKnown RBP9.75□□□□□ -0.85
CPNE8-201ENST00000331366 RFX1P22670 979 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 USP11P51784 963 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 DYNLL1P63167 89 aaKnown RBP9.75□□□□□ -0.85
CPNE8-201ENST00000331366 GRAPQ13588 217 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 PIK3AP1Q6ZUJ8 805 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 FRMD5Q7Z6J6 570 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 GRAPLQ8TC17 118 aaPredicted RBP9.75□□□□□ -0.85
CPNE8-201ENST00000331366 OSBPL9Q96SU4 736 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 TAB2Q9NYJ8 693 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 ZNF335Q9H4Z2 1342 aaPredicted RBP9.75□□□□□ -0.85
CPNE8-201ENST00000331366 A0A087WUV0 522 aaPredicted RBP9.75□□□□□ -0.85
CPNE8-201ENST00000331366 OPA1O60313 960 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 PLCG1P19174 1290 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 NLRP5P59047 1200 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 SPIRE1Q08AE8 756 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 KARSQ15046 597 aaKnown RBP9.75□□□□□ -0.85
CPNE8-201ENST00000331366 SPECC1Q5M775 1068 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 AGBL2Q5U5Z8 902 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 CEP89Q96ST8 783 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 TMEM47Q9BQJ4 181 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 LACRTQ9GZZ8 138 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 KAT14Q9H8E8 782 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 C6orf50Q9HD87 102 aa9.75□□□□□ -0.85
CPNE8-201ENST00000331366 RNF40O75150 1001 aa9.74□□□□□ -0.85
CPNE8-201ENST00000331366 GPTP24298 496 aa9.74□□□□□ -0.85
CPNE8-201ENST00000331366 RPS8P62241 208 aaKnown RBP9.74□□□□□ -0.85
CPNE8-201ENST00000331366 CUL1Q13616 776 aa9.74□□□□□ -0.85
CPNE8-201ENST00000331366 SPATA4Q8NEY3 305 aa9.74□□□□□ -0.85
CPNE8-201ENST00000331366 SLC30A5Q8TAD4 765 aa9.74□□□□□ -0.85
CPNE8-201ENST00000331366 PBKQ96KB5 322 aa9.74□□□□□ -0.85
CPNE8-201ENST00000331366 NDST4Q9H3R1 872 aa9.74□□□□□ -0.85
CPNE8-201ENST00000331366 STIM2Q9P246 746 aa9.74□□□□□ -0.85
CPNE8-201ENST00000331366 PIK3CDO00329 1044 aa9.74□□□□□ -0.85
CPNE8-201ENST00000331366 PLA2G6O60733 806 aa9.74□□□□□ -0.85
CPNE8-201ENST00000331366 FNTAP49354 379 aa9.74□□□□□ -0.85
CPNE8-201ENST00000331366 PPP2R5EQ16537 467 aa9.74□□□□□ -0.85
CPNE8-201ENST00000331366 LACTB2Q53H82 288 aaPredicted RBP9.74□□□□□ -0.85
CPNE8-201ENST00000331366 ARMC9Q7Z3E5 817 aa9.74□□□□□ -0.85
CPNE8-201ENST00000331366 PPM1EQ8WY54 764 aa9.74□□□□□ -0.85
CPNE8-201ENST00000331366 NT5C3AQ9H0P0 336 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms